RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 SMAD5-AS1Q9Y6J3 95 aa4.86□□□□□ -1.63
CLK4-202ENST00000519132 IGHV3OR16-8A0A075B7F1 116 aa4.85□□□□□ -1.63
CLK4-202ENST00000519132 C16orf90A8MZG2 172 aa4.85□□□□□ -1.63
CLK4-202ENST00000519132 KRTAP10-3P60369 221 aa4.85□□□□□ -1.63
CLK4-202ENST00000519132 CASC10Q5T4H9 136 aa4.85□□□□□ -1.63
CLK4-202ENST00000519132 INSP01308 110 aa4.85□□□□□ -1.63
CLK4-202ENST00000519132 MIFP14174 115 aa4.85□□□□□ -1.63
CLK4-202ENST00000519132 DEFB136Q30KP8 78 aa4.85□□□□□ -1.63
CLK4-202ENST00000519132 RHPN1-AS1Q9BWJ2 59 aa4.85□□□□□ -1.63
CLK4-202ENST00000519132 NDUFA12Q9UI09 145 aa4.85□□□□□ -1.63
CLK4-202ENST00000519132 PHLDA3Q9Y5J5 127 aa4.85□□□□□ -1.63
CLK4-202ENST00000519132 A0A087WVE0 104 aa4.84□□□□□ -1.63
CLK4-202ENST00000519132 TRBV30A0A0K0K1B3 111 aa4.84□□□□□ -1.63
CLK4-202ENST00000519132 PRB4P10163 310 aaPredicted RBP4.84□□□□□ -1.63
CLK4-202ENST00000519132 SPTSSBQ8NFR3 76 aa4.84□□□□□ -1.63
CLK4-202ENST00000519132 C16orf74Q96GX8 76 aa4.84□□□□□ -1.63
CLK4-202ENST00000519132 IGHV3-33P01772 117 aa4.84□□□□□ -1.63
CLK4-202ENST00000519132 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.84□□□□□ -1.63
CLK4-202ENST00000519132 NIPBLQ6KC79 2804 aaeCLIP4.84□□□□□ -1.64
CLK4-202ENST00000519132 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
CLK4-202ENST00000519132 KRTAP4-6Q9BYQ5 205 aa4.83□□□□□ -1.64
CLK4-202ENST00000519132 HIGD1CA8MV81 97 aa4.83□□□□□ -1.64
CLK4-202ENST00000519132 GNRH2O43555 120 aa4.83□□□□□ -1.64
CLK4-202ENST00000519132 CMC4P56277 68 aaPredicted RBP4.83□□□□□ -1.64
CLK4-202ENST00000519132 TMEM141Q96I45 108 aa4.83□□□□□ -1.64
CLK4-202ENST00000519132 SND1-IT1Q9HBX3 110 aa4.83□□□□□ -1.64
CLK4-202ENST00000519132 RMI2Q96E14 147 aa4.83□□□□□ -1.64
CLK4-202ENST00000519132 IGHV3-49A0A0A0MS15 119 aa4.82□□□□□ -1.64
CLK4-202ENST00000519132 IGHV3-66A0A0C4DH42 116 aa4.82□□□□□ -1.64
CLK4-202ENST00000519132 A0A0J9YWU9 116 aa4.82□□□□□ -1.64
CLK4-202ENST00000519132 TRBV6-1A0A0K0K1D8 114 aa4.82□□□□□ -1.64
CLK4-202ENST00000519132 ORMDL3Q8N138 153 aa4.82□□□□□ -1.64
CLK4-202ENST00000519132 IGHV3-74A0A0B4J1X5 117 aa4.82□□□□□ -1.64
CLK4-202ENST00000519132 TRAV22A0A0B4J277 110 aa4.82□□□□□ -1.64
CLK4-202ENST00000519132 A8MU10 97 aa4.82□□□□□ -1.64
CLK4-202ENST00000519132 CELA1Q9UNI1 258 aa4.82□□□□□ -1.64
CLK4-202ENST00000519132 IGKV3D-7A0A0C4DH55 119 aa4.81□□□□□ -1.64
CLK4-202ENST00000519132 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
CLK4-202ENST00000519132 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
CLK4-202ENST00000519132 LEPROTO15243 131 aa4.81□□□□□ -1.64
CLK4-202ENST00000519132 DEFB114Q30KQ6 69 aa4.81□□□□□ -1.64
CLK4-202ENST00000519132 HCG22E2RYF7 251 aa4.8□□□□□ -1.64
CLK4-202ENST00000519132 TEP1Q99973 2627 aaKnown RBP4.8□□□□□ -1.64
CLK4-202ENST00000519132 M0R3E3 92 aa4.8□□□□□ -1.64
CLK4-202ENST00000519132 TLX1NBP0CAT3 122 aa4.8□□□□□ -1.64
CLK4-202ENST00000519132 ATP5EP2Q5VTU8 51 aa4.8□□□□□ -1.64
CLK4-202ENST00000519132 TMEM263Q8WUH6 116 aaKnown RBP4.8□□□□□ -1.64
CLK4-202ENST00000519132 C3orf84H3BNL1 204 aa4.79□□□□□ -1.64
CLK4-202ENST00000519132 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
CLK4-202ENST00000519132 SNURFQ9Y675 71 aa4.79□□□□□ -1.64
CLK4-202ENST00000519132 FAM168BA1KXE4 195 aa4.79□□□□□ -1.64
CLK4-202ENST00000519132 IGLV1-51P01701 117 aa4.79□□□□□ -1.64
CLK4-202ENST00000519132 COX6CP09669 75 aa4.79□□□□□ -1.64
CLK4-202ENST00000519132 PLNP26678 52 aa4.79□□□□□ -1.64
CLK4-202ENST00000519132 SETD2Q9BYW2 2564 aaPredicted RBP4.79□□□□□ -1.64
CLK4-202ENST00000519132 IGHV3-30P01768 117 aa4.79□□□□□ -1.64
CLK4-202ENST00000519132 IGHV3-30-5P0DP03 117 aa4.79□□□□□ -1.64
CLK4-202ENST00000519132 Q86TA4 180 aa4.79□□□□□ -1.64
CLK4-202ENST00000519132 WFDC9Q8NEX5 89 aa4.79□□□□□ -1.64
CLK4-202ENST00000519132 SDHAF1A6NFY7 115 aa4.78□□□□□ -1.64
CLK4-202ENST00000519132 SPANXN1Q5VSR9 72 aa4.78□□□□□ -1.64
CLK4-202ENST00000519132 LENEPQ9Y5L5 61 aa4.78□□□□□ -1.64
CLK4-202ENST00000519132 JMJD1CQ15652 2540 aa4.78□□□□□ -1.64
CLK4-202ENST00000519132 TENM1Q9UKZ4 2725 aa4.78□□□□□ -1.64
CLK4-202ENST00000519132 hDV103S1A0JD37 113 aa4.78□□□□□ -1.64
CLK4-202ENST00000519132 GFRA4Q9GZZ7 299 aa4.78□□□□□ -1.64
CLK4-202ENST00000519132 RPL28P46779 137 aaKnown RBP4.77□□□□□ -1.65
CLK4-202ENST00000519132 WNK1Q9H4A3 2382 aa4.77□□□□□ -1.65
CLK4-202ENST00000519132 TRAV23DV6A0A075B6W5 121 aa4.77□□□□□ -1.65
CLK4-202ENST00000519132 SH2D1AO60880 128 aa4.77□□□□□ -1.65
CLK4-202ENST00000519132 Q5VV11 94 aa4.77□□□□□ -1.65
CLK4-202ENST00000519132 NACAE9PAV3 2078 aa4.77□□□□□ -1.65
CLK4-202ENST00000519132 FBN1P35555 2871 aaKnown RBP4.77□□□□□ -1.65
CLK4-202ENST00000519132 IGKV2-40A0A087WW87 121 aaPredicted RBP4.77□□□□□ -1.65
CLK4-202ENST00000519132 TRBV10-3A0A0K0K1G6 114 aa4.77□□□□□ -1.65
CLK4-202ENST00000519132 IGKV2D-40P01614 121 aaPredicted RBP4.77□□□□□ -1.65
CLK4-202ENST00000519132 C8orf17Q9NRJ1 99 aa4.77□□□□□ -1.65
CLK4-202ENST00000519132 ATRQ13535 2644 aa4.76□□□□□ -1.65
CLK4-202ENST00000519132 IGKV3-7A0A075B6H7 116 aa4.76□□□□□ -1.65
CLK4-202ENST00000519132 ZNF815PA8K554 130 aa4.76□□□□□ -1.65
CLK4-202ENST00000519132 A8MTW9 85 aa4.76□□□□□ -1.65
CLK4-202ENST00000519132 Q6ZTC4 211 aa4.76□□□□□ -1.65
CLK4-202ENST00000519132 C14orf178Q8N769 122 aaPredicted RBP4.76□□□□□ -1.65
CLK4-202ENST00000519132 A0A0J9YX75 114 aa4.75□□□□□ -1.65
CLK4-202ENST00000519132 BAALC-AS2P0C853 105 aa4.75□□□□□ -1.65
CLK4-202ENST00000519132 RETNLBQ9BQ08 111 aa4.75□□□□□ -1.65
CLK4-202ENST00000519132 CYP4F30PQ9H0H9 118 aa4.75□□□□□ -1.65
CLK4-202ENST00000519132 IGKV3D-20A0A0C4DH25 116 aa4.75□□□□□ -1.65
CLK4-202ENST00000519132 A0A0J9YY99 117 aa4.75□□□□□ -1.65
CLK4-202ENST00000519132 LINC01546A6NGU7 62 aa4.75□□□□□ -1.65
CLK4-202ENST00000519132 U3KQK5 164 aa4.75□□□□□ -1.65
CLK4-202ENST00000519132 DEFB131AP59861 70 aa4.74□□□□□ -1.65
CLK4-202ENST00000519132 C9orf116Q5BN46 136 aaPredicted RBP4.74□□□□□ -1.65
CLK4-202ENST00000519132 Q8TAT8 98 aa4.74□□□□□ -1.65
CLK4-202ENST00000519132 RPP21Q9H633 154 aaKnown RBP4.74□□□□□ -1.65
CLK4-202ENST00000519132 ICOSQ9Y6W8 199 aa4.74□□□□□ -1.65
CLK4-202ENST00000519132 CHKB-CPT1BH3BT56 60 aa4.73□□□□□ -1.65
CLK4-202ENST00000519132 H7C2G1 150 aa4.73□□□□□ -1.65
CLK4-202ENST00000519132 DNAL4O96015 105 aa4.73□□□□□ -1.65
CLK4-202ENST00000519132 ZFAND2AQ8N6M9 145 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms