RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 C15orf56Q8N910 161 aa11.85□□□□□ -0.51
CTNNA1-213ENST00000519113 LBHQ53QV2 105 aaPredicted RBP11.84□□□□□ -0.51
CTNNA1-213ENST00000519113 BVES-AS1Q5T3Y7 98 aa11.84□□□□□ -0.51
CTNNA1-213ENST00000519113 GAGE12HA6NDE8 117 aa11.83□□□□□ -0.52
CTNNA1-213ENST00000519113 COX7A2LO14548 114 aa11.83□□□□□ -0.52
CTNNA1-213ENST00000519113 NDUFA1O15239 70 aa11.83□□□□□ -0.52
CTNNA1-213ENST00000519113 HIST1H4GQ99525 98 aa11.83□□□□□ -0.52
CTNNA1-213ENST00000519113 COX7B2Q8TF08 81 aa11.82□□□□□ -0.52
CTNNA1-213ENST00000519113 LINC00474Q9P2X8 69 aa11.82□□□□□ -0.52
CTNNA1-213ENST00000519113 A0A0J9YXY3 114 aa11.81□□□□□ -0.52
CTNNA1-213ENST00000519113 SRSF9Q13242 221 aaKnown RBP eCLIP11.81□□□□□ -0.52
CTNNA1-213ENST00000519113 HIGD2BQ4VC39 106 aa11.81□□□□□ -0.52
CTNNA1-213ENST00000519113 MALP21145 153 aa11.8□□□□□ -0.52
CTNNA1-213ENST00000519113 FOXI1Q12951 378 aa11.8□□□□□ -0.52
CTNNA1-213ENST00000519113 COL5A1-AS1Q5SY13 56 aa11.8□□□□□ -0.52
CTNNA1-213ENST00000519113 CEND1Q8N111 149 aa11.8□□□□□ -0.52
CTNNA1-213ENST00000519113 ORAOV1Q8WV07 137 aa11.8□□□□□ -0.52
CTNNA1-213ENST00000519113 SPANXB1Q9NS25 103 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-213ENST00000519113 TOMM7Q9P0U1 55 aa11.8□□□□□ -0.52
CTNNA1-213ENST00000519113 TMEM238C9JI98 176 aa11.79□□□□□ -0.52
CTNNA1-213ENST00000519113 PKIGQ9Y2B9 76 aa11.79□□□□□ -0.52
CTNNA1-213ENST00000519113 A0A096LNI7 61 aa11.78□□□□□ -0.52
CTNNA1-213ENST00000519113 PRSS2P07478 247 aa11.78□□□□□ -0.52
CTNNA1-213ENST00000519113 HERV-K104P63124 156 aa11.78□□□□□ -0.52
CTNNA1-213ENST00000519113 Q6ZRP5 223 aa11.78□□□□□ -0.52
CTNNA1-213ENST00000519113 GVQW2A0A096LPI5 108 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-213ENST00000519113 APOMO95445 188 aa11.77□□□□□ -0.53
CTNNA1-213ENST00000519113 PTTG1IPP53801 180 aa11.77□□□□□ -0.53
CTNNA1-213ENST00000519113 SFTA2Q6UW10 78 aa11.77□□□□□ -0.53
CTNNA1-213ENST00000519113 A6NDN8 102 aa11.76□□□□□ -0.53
CTNNA1-213ENST00000519113 TIMM17BO60830 172 aa11.76□□□□□ -0.53
CTNNA1-213ENST00000519113 C6orf226Q5I0X4 101 aa11.76□□□□□ -0.53
CTNNA1-213ENST00000519113 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-213ENST00000519113 Q8IZM0 81 aa11.75□□□□□ -0.53
CTNNA1-213ENST00000519113 MEIG1Q5JSS6 88 aa11.73□□□□□ -0.53
CTNNA1-213ENST00000519113 FXYD2P54710 66 aa11.72□□□□□ -0.53
CTNNA1-213ENST00000519113 Q6ZVH6 145 aa11.72□□□□□ -0.53
CTNNA1-213ENST00000519113 SPANXDQ9BXN6 97 aa11.72□□□□□ -0.53
CTNNA1-213ENST00000519113 SPANXCQ9NY87 97 aa11.72□□□□□ -0.53
CTNNA1-213ENST00000519113 LPAP08519 4548 aa11.72□□□□□ -0.53
CTNNA1-213ENST00000519113 TMEM238LA0A1B0GVL6 79 aa11.71□□□□□ -0.53
CTNNA1-213ENST00000519113 A6NJY4 79 aa11.71□□□□□ -0.53
CTNNA1-213ENST00000519113 CXCL5P42830 114 aa11.71□□□□□ -0.53
CTNNA1-213ENST00000519113 CKS1BP61024 79 aa11.71□□□□□ -0.53
CTNNA1-213ENST00000519113 LITAFQ99732 161 aa11.71□□□□□ -0.53
CTNNA1-213ENST00000519113 SMIM13P0DJ93 91 aa11.69□□□□□ -0.54
CTNNA1-213ENST00000519113 RPL24P83731 157 aaKnown RBP11.69□□□□□ -0.54
CTNNA1-213ENST00000519113 ADAMTSL4-AS1Q5T5F5 129 aa11.69□□□□□ -0.54
CTNNA1-213ENST00000519113 MUSTN1Q8IVN3 82 aa11.69□□□□□ -0.54
CTNNA1-213ENST00000519113 CARD19Q96LW7 228 aa11.69□□□□□ -0.54
CTNNA1-213ENST00000519113 IFITM1P13164 125 aa11.68□□□□□ -0.54
CTNNA1-213ENST00000519113 SPAG11BQ08648 103 aa11.68□□□□□ -0.54
CTNNA1-213ENST00000519113 KIAA0087Q14695 138 aa11.68□□□□□ -0.54
CTNNA1-213ENST00000519113 COPS9Q8WXC6 57 aa11.68□□□□□ -0.54
CTNNA1-213ENST00000519113 NHP2Q9NX24 153 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-213ENST00000519113 A0A0U1RRA0 63 aa11.66□□□□□ -0.54
CTNNA1-213ENST00000519113 LINC00158P58513 81 aa11.65□□□□□ -0.54
CTNNA1-213ENST00000519113 C2orf82Q6UX34 121 aa11.65□□□□□ -0.54
CTNNA1-213ENST00000519113 LINC00526Q96FQ7 95 aa11.65□□□□□ -0.54
CTNNA1-213ENST00000519113 ZNF561-AS1K7EIQ3 104 aa11.64□□□□□ -0.55
CTNNA1-213ENST00000519113 TAX1BP3O14907 124 aa11.64□□□□□ -0.55
CTNNA1-213ENST00000519113 SYCNQ0VAF6 134 aa11.64□□□□□ -0.55
CTNNA1-213ENST00000519113 PSORS1C2Q9UIG4 136 aa11.64□□□□□ -0.55
CTNNA1-213ENST00000519113 A0A1B0GV90 55 aa11.63□□□□□ -0.55
CTNNA1-213ENST00000519113 DAND5Q8N907 189 aa11.63□□□□□ -0.55
CTNNA1-213ENST00000519113 ERG28Q9UKR5 140 aa11.63□□□□□ -0.55
CTNNA1-213ENST00000519113 A0A1B0GWB2 263 aa11.62□□□□□ -0.55
CTNNA1-213ENST00000519113 A4D1N5 150 aa11.62□□□□□ -0.55
CTNNA1-213ENST00000519113 K7ERJ3 54 aa11.62□□□□□ -0.55
CTNNA1-213ENST00000519113 NPC2P61916 151 aa11.62□□□□□ -0.55
CTNNA1-213ENST00000519113 LINC00308Q8TCZ7 52 aa11.62□□□□□ -0.55
CTNNA1-213ENST00000519113 RAB37Q96AX2 223 aa11.62□□□□□ -0.55
CTNNA1-213ENST00000519113 LOC107984640A0A0U1RRK4 108 aa11.61□□□□□ -0.55
CTNNA1-213ENST00000519113 PFN2P35080 140 aa11.61□□□□□ -0.55
CTNNA1-213ENST00000519113 GAGE2BQ13066 116 aa11.61□□□□□ -0.55
CTNNA1-213ENST00000519113 MIR7-3HGQ8N6C7 128 aa11.6□□□□□ -0.55
CTNNA1-213ENST00000519113 C9orf118A6NHY6 69 aa11.59□□□□□ -0.55
CTNNA1-213ENST00000519113 F8WDY8 70 aa11.59□□□□□ -0.55
CTNNA1-213ENST00000519113 COX17Q14061 63 aa11.59□□□□□ -0.55
CTNNA1-213ENST00000519113 UNQ6190/PRO20217Q6UXQ8 127 aa11.59□□□□□ -0.55
CTNNA1-213ENST00000519113 PPDPFQ9H3Y8 114 aa11.59□□□□□ -0.55
CTNNA1-213ENST00000519113 A0A1W2PNN7 141 aa11.58□□□□□ -0.56
CTNNA1-213ENST00000519113 CFC1BP0CG36 223 aa11.58□□□□□ -0.56
CTNNA1-213ENST00000519113 CFC1P0CG37 223 aa11.58□□□□□ -0.56
CTNNA1-213ENST00000519113 C2orf48Q96LS8 159 aa11.58□□□□□ -0.56
CTNNA1-213ENST00000519113 CAMK2N2Q96S95 79 aa11.58□□□□□ -0.56
CTNNA1-213ENST00000519113 A0A0B4J2C4 111 aa11.57□□□□□ -0.56
CTNNA1-213ENST00000519113 C1orf137Q5JT78 98 aa11.56□□□□□ -0.56
CTNNA1-213ENST00000519113 C10orf25Q5T742 122 aa11.56□□□□□ -0.56
CTNNA1-213ENST00000519113 MUC2Q02817 5179 aa11.56□□□□□ -0.56
CTNNA1-213ENST00000519113 SOSTDC1Q6X4U4 206 aa11.55□□□□□ -0.56
CTNNA1-213ENST00000519113 PRR26Q8N8Z3 221 aa11.55□□□□□ -0.56
CTNNA1-213ENST00000519113 DIRC1Q969H9 104 aa11.55□□□□□ -0.56
CTNNA1-213ENST00000519113 PRO1854Q9UHT4 67 aa11.55□□□□□ -0.56
CTNNA1-213ENST00000519113 TRBV30A0A0K0K1B3 111 aa11.54□□□□□ -0.56
CTNNA1-213ENST00000519113 A0A0U1RQV1 116 aa11.54□□□□□ -0.56
CTNNA1-213ENST00000519113 H3BUT2 72 aa11.54□□□□□ -0.56
CTNNA1-213ENST00000519113 C9orf116Q5BN46 136 aaPredicted RBP11.54□□□□□ -0.56
CTNNA1-213ENST00000519113 EIF4EBP3O60516 100 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-213ENST00000519113 KRTAP9-2Q9BYQ4 174 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms