RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SETBP1Q9Y6X0 1596 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 IQCF6A8MYZ5 107 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 D6R8Y8 96 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 LEPROTL1O95214 131 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 IGLC2P0DOY2 106 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 IGLC3P0DOY3 106 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 S100A3P33764 101 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 WFDC2Q14508 124 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 PIGYQ3MUY2 71 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 Q5BKY6 102 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 NMSQ5H8A3 153 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 MUSTN1Q8IVN3 82 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 TSC2P49815 1807 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 ATRQ13535 2644 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 NKTRP30414 1462 aaKnown RBP0.21□□□□□ -2.38
SQLE-202ENST00000518604 ERVK-7P63135 1459 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 CCDC18Q5T9S5 1454 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 UACAQ9BZF9 1416 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 CEP170BQ9Y4F5 1589 aaPredicted RBP0.2□□□□□ -2.38
SQLE-202ENST00000518604 RGPD2P0DJD1 1756 aa0.2□□□□□ -2.38
SQLE-202ENST00000518604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.2□□□□□ -2.38
SQLE-202ENST00000518604 SPRR1AP35321 89 aa0.2□□□□□ -2.38
SQLE-202ENST00000518604 CRIPTQ9P021 101 aa0.2□□□□□ -2.38
SQLE-202ENST00000518604 HIVEP3Q5T1R4 2406 aa0.2□□□□□ -2.38
SQLE-202ENST00000518604 QSER1Q2KHR3 1735 aa0.2□□□□□ -2.38
SQLE-202ENST00000518604 TENM4Q6N022 2769 aa0.2□□□□□ -2.38
SQLE-202ENST00000518604 NCOR2Q9Y618 2525 aa0.2□□□□□ -2.38
SQLE-202ENST00000518604 SYNE2Q8WXH0 6885 aaKnown RBP0.19□□□□□ -2.38
SQLE-202ENST00000518604 SPRR1BP22528 89 aa0.19□□□□□ -2.38
SQLE-202ENST00000518604 GNGT1P63211 74 aa0.19□□□□□ -2.38
SQLE-202ENST00000518604 PEA15Q15121 130 aa0.19□□□□□ -2.38
SQLE-202ENST00000518604 IGSF10Q6WRI0 2623 aa0.19□□□□□ -2.38
SQLE-202ENST00000518604 WNK2Q9Y3S1 2297 aa0.18□□□□□ -2.38
SQLE-202ENST00000518604 SUPT6HQ7KZ85 1726 aaKnown RBP0.18□□□□□ -2.38
SQLE-202ENST00000518604 LRRC7Q96NW7 1537 aa0.18□□□□□ -2.38
SQLE-202ENST00000518604 DCAF1Q9Y4B6 1507 aa0.18□□□□□ -2.38
SQLE-202ENST00000518604 HRNRQ86YZ3 2850 aaPredicted RBP0.18□□□□□ -2.38
SQLE-202ENST00000518604 LRRC9Q6ZRR7 1453 aa0.18□□□□□ -2.38
SQLE-202ENST00000518604 FXYD6-FXYD2A0A087WZ82 144 aa0.18□□□□□ -2.38
SQLE-202ENST00000518604 MYMXA0A1B0GTQ4 84 aa0.18□□□□□ -2.38
SQLE-202ENST00000518604 COX6B1P14854 86 aa0.18□□□□□ -2.38
SQLE-202ENST00000518604 SNRPFP62306 86 aaKnown RBP0.18□□□□□ -2.38
SQLE-202ENST00000518604 ALKAL2Q6UX46 152 aa0.18□□□□□ -2.38
SQLE-202ENST00000518604 LINC00643Q86TS7 51 aa0.18□□□□□ -2.38
SQLE-202ENST00000518604 SPTA1P02549 2419 aa0.18□□□□□ -2.38
SQLE-202ENST00000518604 POLR1AO95602 1720 aaPredicted RBP0.18□□□□□ -2.38
SQLE-202ENST00000518604 CACNA1AO00555 2505 aa0.18□□□□□ -2.38
SQLE-202ENST00000518604 KIF20BQ96Q89 1820 aa0.17□□□□□ -2.38
SQLE-202ENST00000518604 LPAP08519 4548 aa0.17□□□□□ -2.38
SQLE-202ENST00000518604 MYCBP2O75592 4640 aa0.17□□□□□ -2.38
SQLE-202ENST00000518604 DEFB112Q30KQ8 113 aa0.17□□□□□ -2.38
SQLE-202ENST00000518604 RABAC1Q9UI14 185 aa0.17□□□□□ -2.38
SQLE-202ENST00000518604 LTN1O94822 1766 aa0.17□□□□□ -2.38
SQLE-202ENST00000518604 CFAP74Q9C0B2 1584 aa0.16□□□□□ -2.38
SQLE-202ENST00000518604 CSPG4Q6UVK1 2322 aa0.16□□□□□ -2.38
SQLE-202ENST00000518604 KDM5DQ9BY66 1539 aa0.16□□□□□ -2.38
SQLE-202ENST00000518604 PKD1L1Q8TDX9 2849 aa0.16□□□□□ -2.38
SQLE-202ENST00000518604 ABCA2Q9BZC7 2435 aa0.16□□□□□ -2.38
SQLE-202ENST00000518604 PIK3C2BO00750 1634 aa0.16□□□□□ -2.38
SQLE-202ENST00000518604 DOT1LQ8TEK3 1739 aa0.16□□□□□ -2.38
SQLE-202ENST00000518604 HMCN2Q8NDA2 5059 aa0.15□□□□□ -2.39
SQLE-202ENST00000518604 CNOT1A5YKK6 2376 aaKnown RBP0.15□□□□□ -2.39
SQLE-202ENST00000518604 SMIM11AP58511 58 aa0.15□□□□□ -2.39
SQLE-202ENST00000518604 PLGLAQ15195 96 aa0.15□□□□□ -2.39
SQLE-202ENST00000518604 DEFB109BQ30KR1 87 aa0.15□□□□□ -2.39
SQLE-202ENST00000518604 ST20Q9HBF5 79 aa0.15□□□□□ -2.39
SQLE-202ENST00000518604 ALMS1Q8TCU4 4167 aa0.15□□□□□ -2.39
SQLE-202ENST00000518604 PTPN13Q12923 2485 aa0.15□□□□□ -2.39
SQLE-202ENST00000518604 LRRIQ1Q96JM4 1722 aa0.15□□□□□ -2.39
SQLE-202ENST00000518604 PREX1Q8TCU6 1659 aa0.14□□□□□ -2.39
SQLE-202ENST00000518604 MAGI3Q5TCQ9 1506 aa0.14□□□□□ -2.39
SQLE-202ENST00000518604 SPINK1P00995 79 aa0.14□□□□□ -2.39
SQLE-202ENST00000518604 LELP1Q5T871 98 aa0.14□□□□□ -2.39
SQLE-202ENST00000518604 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
SQLE-202ENST00000518604 ABCA8O94911 1581 aa0.14□□□□□ -2.39
SQLE-202ENST00000518604 COL14A1Q05707 1796 aaKnown RBP0.14□□□□□ -2.39
SQLE-202ENST00000518604 SCN11AQ9UI33 1791 aa0.14□□□□□ -2.39
SQLE-202ENST00000518604 RRBP1Q9P2E9 1410 aaKnown RBP0.13□□□□□ -2.39
SQLE-202ENST00000518604 MAP3K1Q13233 1512 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 CHD8Q9HCK8 2581 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 A0A1B0GUT8 65 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 CEBPZOSA8MTT3 80 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 PRM1P04553 51 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 ACYP1P07311 99 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 KLK9Q2XQG4 91 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 BVES-AS1Q5T3Y7 98 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 DEFB105AQ8NG35 78 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 USMG5Q96IX5 58 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 U3KQA8 63 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 NCOA2Q15596 1464 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 CCDC141Q6ZP82 1450 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 BCORQ6W2J9 1755 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 HECTD4Q9Y4D8 3996 aa0.13□□□□□ -2.39
SQLE-202ENST00000518604 CD163L1Q9NR16 1453 aa0.12□□□□□ -2.39
SQLE-202ENST00000518604 EP300Q09472 2414 aaPredicted RBP0.12□□□□□ -2.39
SQLE-202ENST00000518604 DMBT1Q9UGM3 2413 aaPredicted RBP0.12□□□□□ -2.39
SQLE-202ENST00000518604 TRAV21A0A0B4J279 112 aa0.12□□□□□ -2.39
SQLE-202ENST00000518604 CPSF4LA6NMK7 179 aaKnown RBP0.12□□□□□ -2.39
SQLE-202ENST00000518604 CFDP00746 253 aaPredicted RBP0.12□□□□□ -2.39
SQLE-202ENST00000518604 COX7BP24311 80 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 3267.5 ms