RNA–Protein interactions for RNA: ENST00000517875.5

LRRCC1-203, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 2,385 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-203ENST00000517875 SYCNQ0VAF6 134 aa12.06□□□□□ -0.48
LRRCC1-203ENST00000517875 A8MU10 97 aa12.05□□□□□ -0.48
LRRCC1-203ENST00000517875 LINC00158P58513 81 aa12.04□□□□□ -0.48
LRRCC1-203ENST00000517875 IGKV3-7A0A075B6H7 116 aa12.04□□□□□ -0.48
LRRCC1-203ENST00000517875 RNASE1P07998 156 aaKnown RBP12.04□□□□□ -0.48
LRRCC1-203ENST00000517875 ANK3Q12955 4377 aaKnown RBP12.03□□□□□ -0.48
LRRCC1-203ENST00000517875 TRBV6-4A0A1B0GX49 114 aa12.03□□□□□ -0.48
LRRCC1-203ENST00000517875 C1orf64Q8NEQ6 169 aa12.03□□□□□ -0.48
LRRCC1-203ENST00000517875 OCR1Q9BZK8 76 aa12.03□□□□□ -0.48
LRRCC1-203ENST00000517875 NDUFS5O43920 106 aa12.01□□□□□ -0.49
LRRCC1-203ENST00000517875 HIGD2AQ9BW72 106 aa12.01□□□□□ -0.49
LRRCC1-203ENST00000517875 NSD1Q96L73 2696 aaPredicted RBP12.01□□□□□ -0.49
LRRCC1-203ENST00000517875 NTM-AS1Q6ZSK4 140 aa12.01□□□□□ -0.49
LRRCC1-203ENST00000517875 NIPBLQ6KC79 2804 aaeCLIP12□□□□□ -0.496e-8■■□□□ 13
LRRCC1-203ENST00000517875 F8P00451 2351 aa12□□□□□ -0.49
LRRCC1-203ENST00000517875 SCXQ7RTU7 201 aa12□□□□□ -0.49
LRRCC1-203ENST00000517875 INAFM1C9JVW0 142 aa11.99□□□□□ -0.49
LRRCC1-203ENST00000517875 IGHV3-11P01762 117 aa11.99□□□□□ -0.49
LRRCC1-203ENST00000517875 CD164L2Q6UWJ8 174 aa11.98□□□□□ -0.49
LRRCC1-203ENST00000517875 COX7B2Q8TF08 81 aa11.98□□□□□ -0.49
LRRCC1-203ENST00000517875 A8MUN3 132 aa11.98□□□□□ -0.49
LRRCC1-203ENST00000517875 H3BUA1 57 aa11.98□□□□□ -0.49
LRRCC1-203ENST00000517875 H3BS24 57 aa11.97□□□□□ -0.49
LRRCC1-203ENST00000517875 Q6ZSN1 163 aa11.97□□□□□ -0.49
LRRCC1-203ENST00000517875 USMG5Q96IX5 58 aa11.97□□□□□ -0.49
LRRCC1-203ENST00000517875 ESM1Q9NQ30 184 aa11.97□□□□□ -0.49
LRRCC1-203ENST00000517875 NDUFA4O00483 81 aa11.96□□□□□ -0.49
LRRCC1-203ENST00000517875 ZNF73O43830 326 aaPredicted RBP11.96□□□□□ -0.49
LRRCC1-203ENST00000517875 C9orf66Q5T8R8 295 aa11.96□□□□□ -0.49
LRRCC1-203ENST00000517875 PHF5AQ7RTV0 110 aaKnown RBP11.96□□□□□ -0.49
LRRCC1-203ENST00000517875 DNAJC9-AS1A6NH13 148 aa11.96□□□□□ -0.5
LRRCC1-203ENST00000517875 C8orf87E5RJ46 101 aa11.96□□□□□ -0.5
LRRCC1-203ENST00000517875 IGLV1-40P01703 118 aa11.96□□□□□ -0.5
LRRCC1-203ENST00000517875 PDE6GP18545 87 aa11.96□□□□□ -0.5
LRRCC1-203ENST00000517875 MAST4O15021 2626 aa11.95□□□□□ -0.5
LRRCC1-203ENST00000517875 FN1P02751 2386 aaKnown RBP11.95□□□□□ -0.5
LRRCC1-203ENST00000517875 K7EQD1 137 aa11.94□□□□□ -0.5
LRRCC1-203ENST00000517875 LINC00269Q8N2A0 174 aa11.94□□□□□ -0.5
LRRCC1-203ENST00000517875 NANOS2P60321 138 aaKnown RBP11.93□□□□□ -0.5
LRRCC1-203ENST00000517875 Q5VV11 94 aa11.93□□□□□ -0.5
LRRCC1-203ENST00000517875 TEP1Q99973 2627 aaKnown RBP11.93□□□□□ -0.5
LRRCC1-203ENST00000517875 C16orf90A8MZG2 172 aa11.93□□□□□ -0.5
LRRCC1-203ENST00000517875 UBE2AP49459 152 aa11.93□□□□□ -0.5
LRRCC1-203ENST00000517875 C11orf44Q8N8P7 122 aa11.92□□□□□ -0.5
LRRCC1-203ENST00000517875 TOMM7Q9P0U1 55 aa11.92□□□□□ -0.5
LRRCC1-203ENST00000517875 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
LRRCC1-203ENST00000517875 PSCAO43653 123 aa11.91□□□□□ -0.5
LRRCC1-203ENST00000517875 RHPN1-AS1Q9BWJ2 59 aa11.91□□□□□ -0.5
LRRCC1-203ENST00000517875 ZNF702PQ9H963 129 aa11.91□□□□□ -0.5
LRRCC1-203ENST00000517875 SETD2Q9BYW2 2564 aaPredicted RBP11.91□□□□□ -0.5
LRRCC1-203ENST00000517875 UBE2L6O14933 153 aa11.91□□□□□ -0.5
LRRCC1-203ENST00000517875 SPINK13Q1W4C9 94 aa11.9□□□□□ -0.5
LRRCC1-203ENST00000517875 C10orf99Q6UWK7 81 aa11.9□□□□□ -0.5
LRRCC1-203ENST00000517875 K7EMT4 169 aa11.9□□□□□ -0.51
LRRCC1-203ENST00000517875 ATP11AUNQ6ZP68 121 aa11.89□□□□□ -0.51
LRRCC1-203ENST00000517875 SORL1Q92673 2214 aa11.89□□□□□ -0.51
LRRCC1-203ENST00000517875 A6NN06 94 aa11.89□□□□□ -0.51
LRRCC1-203ENST00000517875 CDC42SE2Q9NRR3 84 aa11.89□□□□□ -0.51
LRRCC1-203ENST00000517875 IGHV3-53P01767 116 aa11.88□□□□□ -0.51
LRRCC1-203ENST00000517875 SPTSSBQ8NFR3 76 aa11.88□□□□□ -0.51
LRRCC1-203ENST00000517875 IGKV4-1P06312 121 aa11.87□□□□□ -0.51
LRRCC1-203ENST00000517875 MUC7Q8TAX7 377 aa11.87□□□□□ -0.51
LRRCC1-203ENST00000517875 JMJD1CQ15652 2540 aa11.86□□□□□ -0.51
LRRCC1-203ENST00000517875 LINC00575Q6W349 94 aa11.85□□□□□ -0.51
LRRCC1-203ENST00000517875 SPATA3Q8NHX4 192 aa11.85□□□□□ -0.51
LRRCC1-203ENST00000517875 TRBV6-8A0A0A6YYG3 113 aa11.85□□□□□ -0.51
LRRCC1-203ENST00000517875 Q8N9L7 120 aa11.84□□□□□ -0.51
LRRCC1-203ENST00000517875 CYP4F30PQ9H0H9 118 aa11.84□□□□□ -0.51
LRRCC1-203ENST00000517875 CHKB-CPT1BH3BT56 60 aa11.83□□□□□ -0.52
LRRCC1-203ENST00000517875 LINC01006Q8NI28 216 aa11.83□□□□□ -0.52
LRRCC1-203ENST00000517875 LCE6AA0A183 80 aa11.83□□□□□ -0.52
LRRCC1-203ENST00000517875 HCG22E2RYF7 251 aa11.83□□□□□ -0.52
LRRCC1-203ENST00000517875 C7orf65Q6ZTY9 151 aa11.83□□□□□ -0.52
LRRCC1-203ENST00000517875 HTN1P15515 57 aa11.82□□□□□ -0.52
LRRCC1-203ENST00000517875 DIRC1Q969H9 104 aa11.82□□□□□ -0.52
LRRCC1-203ENST00000517875 C6orf99Q4VX62 202 aa11.81□□□□□ -0.52
LRRCC1-203ENST00000517875 C2CD3Q4AC94 2353 aa11.8□□□□□ -0.52
LRRCC1-203ENST00000517875 PRR3P79522 188 aaKnown RBP11.79□□□□□ -0.52
LRRCC1-203ENST00000517875 LCA10Q71F78 164 aa11.79□□□□□ -0.52
LRRCC1-203ENST00000517875 ZCCHC13Q8WW36 166 aaKnown RBP11.78□□□□□ -0.52
LRRCC1-203ENST00000517875 H3BQ85 93 aa11.76□□□□□ -0.53
LRRCC1-203ENST00000517875 FAM30AQ9NZY2 134 aa11.75□□□□□ -0.53
LRRCC1-203ENST00000517875 LINC00612Q8N6U2 182 aa11.74□□□□□ -0.53
LRRCC1-203ENST00000517875 LIMD2Q9BT23 127 aa11.74□□□□□ -0.53
LRRCC1-203ENST00000517875 IGLV4-60A0A075B6I1 120 aa11.74□□□□□ -0.53
LRRCC1-203ENST00000517875 C18orf65Q6ZTR6 163 aa11.74□□□□□ -0.53
LRRCC1-203ENST00000517875 ATRQ13535 2644 aa11.73□□□□□ -0.53
LRRCC1-203ENST00000517875 IGHV3OR16-9A0A0B4J2B5 98 aa11.72□□□□□ -0.53
LRRCC1-203ENST00000517875 PRM2P04554 102 aa11.72□□□□□ -0.53
LRRCC1-203ENST00000517875 KHDC1LQ5JSQ8 128 aa11.72□□□□□ -0.53
LRRCC1-203ENST00000517875 Q6ZQY7 126 aa11.72□□□□□ -0.53
LRRCC1-203ENST00000517875 DEFB136Q30KP8 78 aa11.71□□□□□ -0.53
LRRCC1-203ENST00000517875 CELA1Q9UNI1 258 aa11.71□□□□□ -0.53
LRRCC1-203ENST00000517875 TENM1Q9UKZ4 2725 aa11.71□□□□□ -0.53
LRRCC1-203ENST00000517875 SMIM29Q86T20 159 aa11.7□□□□□ -0.54
LRRCC1-203ENST00000517875 Q8N9P0 234 aaPredicted RBP11.7□□□□□ -0.54
LRRCC1-203ENST00000517875 PRR4Q16378 134 aa11.7□□□□□ -0.54
LRRCC1-203ENST00000517875 SLURP1P55000 103 aa11.69□□□□□ -0.54
LRRCC1-203ENST00000517875 PRR15LQ9BU68 103 aa11.69□□□□□ -0.54
LRRCC1-203ENST00000517875 COX7BP24311 80 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms