RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 IQCJQ1A5X6 159 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 CLPSL2Q6UWE3 100 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 CEND1Q8N111 149 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 ORMDL3Q8N138 153 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 LINC00269Q8N2A0 174 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 Q8N976 141 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 UBE2WQ96B02 151 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 TOMM6Q96B49 74 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 TMEM242Q9NWH2 141 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 NACAE9PAV3 2078 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 IGLV7-46A0A075B6I9 117 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 IGKV2D-30A0A075B6S6 120 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 TRBV27A0A0K0K1C4 114 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 M0R143 59 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 TAX1BP3O14907 124 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 NPYP01303 97 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 NMUP48645 174 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 POLR2KP53803 58 aaKnown RBP1.81□□□□□ -2.12
SKP1-204ENST00000517691 Q0VG73 95 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 LCA10Q71F78 164 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 BRK1Q8WUW1 75 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 RMI2Q96E14 147 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 C20orf78Q9BR46 151 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 CHCHD7Q9BUK0 85 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 IMUPQ9GZP8 106 aa1.81□□□□□ -2.12
SKP1-204ENST00000517691 IGLV4-60A0A075B6I1 120 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 IGLV10-54A0A075B6I4 117 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 TRBV24-1A0A075B6N3 115 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 FAM236AA0A1B0GUQ0 79 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 FAM236BA0A1B0GV22 79 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 H7C423 109 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 M0R378 163 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 PHOX2AO14813 284 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 LECT2O14960 151 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 HLA-DQA1P01909 254 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 LUZP6Q538Z0 58 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 SLC25A34Q6PIV7 304 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 ENHOQ6UWT2 76 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 ADM2Q7Z4H4 148 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 SPATA12Q7Z6I5 190 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 C3orf22Q8N5N4 141 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 SMIM2Q9BVW6 85 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 SMCO4Q9NRQ5 59 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 TRAPPC1Q9Y5R8 145 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 DNAH1Q9P2D7 4330 aa1.8□□□□□ -2.12
SKP1-204ENST00000517691 A0A087WTM6 91 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 J3QR89 54 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 SERF1AO75920 110 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 MT-ND6P03923 174 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 FUSP35637 526 aaKnown RBP eCLIP1.79□□□□□ -2.12
SKP1-204ENST00000517691 MIAQ16674 131 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 RNASE13Q5GAN3 156 aaKnown RBP1.79□□□□□ -2.12
SKP1-204ENST00000517691 Q6ZRN7 208 aaPredicted RBP1.79□□□□□ -2.12
SKP1-204ENST00000517691 Q8N377 158 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 DAND5Q8N907 189 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 LITAFQ99732 161 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 SNHG12Q9BXW3 62 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 LAMTOR3Q9UHA4 124 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 HECTD4Q9Y4D8 3996 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 FRAS1Q86XX4 4008 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 DNAH6Q9C0G6 4158 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 C16orf90A8MZG2 172 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 CCDC179H3BU77 68 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 TMEM256-PLSCR3K7ERE1 68 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 SCO1O75880 301 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 TLX1NBP0CAT3 122 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 FABP2P12104 132 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 IFI27P40305 119 aaPredicted RBP1.79□□□□□ -2.12
SKP1-204ENST00000517691 XCL1P47992 114 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 RPL39P62891 51 aaKnown RBP1.79□□□□□ -2.12
SKP1-204ENST00000517691 SS18Q15532 418 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 Q8N8P6 123 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 CAMK2N2Q96S95 79 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 NXT2Q9NPJ8 142 aaKnown RBP1.79□□□□□ -2.12
SKP1-204ENST00000517691 PRR34Q9NV39 138 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 VPS13DQ5THJ4 4388 aa1.79□□□□□ -2.12
SKP1-204ENST00000517691 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.78□□□□□ -2.12
SKP1-204ENST00000517691 TRAV13-1A0A0B4J241 112 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 LINC00959A0A1B0GUT2 108 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 A0A1B0GVX0 72 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 A0A1B0GVY2 172 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 LRCOL1A6NCL2 159 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 K7ERJ3 54 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 HIST1H2BOP23527 126 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 HIST1H2BBP33778 126 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 HIST1H2BDP58876 126 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 HIST1H2BCP62807 126 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 HIST2H2BEQ16778 126 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.78□□□□□ -2.12
SKP1-204ENST00000517691 SCXQ7RTU7 201 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 Q8N814 137 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 HIST1H2BHQ93079 126 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 HIST1H2BNQ99877 126 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 HIST1H2BMQ99879 126 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 OPRPNQ99935 248 aaPredicted RBP1.78□□□□□ -2.12
SKP1-204ENST00000517691 CDC42SE2Q9NRR3 84 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 UBE2D4Q9Y2X8 147 aa1.78□□□□□ -2.12
SKP1-204ENST00000517691 SACSQ9NZJ4 4579 aa1.78□□□□□ -2.13
SKP1-204ENST00000517691 WFDC2Q14508 124 aa1.78□□□□□ -2.13
SKP1-204ENST00000517691 C14orf177Q52M58 125 aa1.78□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms