RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 TRBV25-1A0A075B6N4 114 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 TRBV6-8A0A0A6YYG3 113 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 TRAV26-2A0A0B4J265 109 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 A0A1B0GXF2 115 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 C19orf71A6NCJ1 209 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 A8MWL6 223 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 PSPHP1O15172 72 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 NUPR1O60356 82 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 P01737 135 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 TCRAP04437 139 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 ARMS2P0C7Q2 107 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 SMIM17P0DL12 118 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 UBE2D3P61077 147 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 UBE2D2P62837 147 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 RBX1P62877 108 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 HBBP68871 147 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 MRPL54Q6P161 138 aaKnown RBP2.32□□□□□ -2.04
LINC00534-201ENST00000517400 Q86TA4 180 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 BAGE3Q86Y29 109 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 ZNF664Q8N3J9 261 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 MIR7-3HGQ8N6C7 128 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 LINC00469Q8N7U9 141 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 NUP35Q8NFH5 326 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 C14orf144Q96I85 54 aa2.32□□□□□ -2.04
LINC00534-201ENST00000517400 FABP5P3A8MUU1 101 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 HIGD1CA8MV81 97 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 SH2D1AO60880 128 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 LINC00694P0DN24 101 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 RPL18AQ02543 176 aaKnown RBP2.31□□□□□ -2.04
LINC00534-201ENST00000517400 SAPCD1Q5SSQ6 148 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 FAM162BQ5T6X4 162 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 SPANXN1Q5VSR9 72 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 AMMECR1LQ6DCA0 310 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 SDIM1Q6ZPB5 146 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 MRPL52Q86TS9 123 aaKnown RBP2.31□□□□□ -2.04
LINC00534-201ENST00000517400 SPACA4Q8TDM5 124 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 LINC00526Q96FQ7 95 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 LINC01600Q96MT4 127 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 PRO1933Q9H354 126 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 ZFP30Q9Y2G7 519 aa2.31□□□□□ -2.04
LINC00534-201ENST00000517400 IGHV1-24A0A0C4DH33 117 aa2.3□□□□□ -2.04
LINC00534-201ENST00000517400 A0A1B0GW15 77 aa2.3□□□□□ -2.04
LINC00534-201ENST00000517400 F2Z2F3 143 aa2.3□□□□□ -2.04
LINC00534-201ENST00000517400 PMCHP20382 165 aa2.3□□□□□ -2.04
LINC00534-201ENST00000517400 FOXA3P55318 350 aaPredicted RBP2.3□□□□□ -2.04
LINC00534-201ENST00000517400 C6orf99Q4VX62 202 aa2.3□□□□□ -2.04
LINC00534-201ENST00000517400 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
LINC00534-201ENST00000517400 OR2D3Q8NGH3 330 aa2.3□□□□□ -2.04
LINC00534-201ENST00000517400 C18orf32Q8TCD1 76 aa2.3□□□□□ -2.04
LINC00534-201ENST00000517400 CHCHD1Q96BP2 118 aaKnown RBP2.3□□□□□ -2.04
LINC00534-201ENST00000517400 C2orf88Q9BSF0 95 aa2.3□□□□□ -2.04
LINC00534-201ENST00000517400 A0A096LNI7 61 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 TRBV10-1A0A0K0K1A3 114 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 A0A1B0GUT8 65 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 C20orf202A1L168 122 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 NTF3P20783 257 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 XCL1P47992 114 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 UBE2D1P51668 147 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 KRTDAPP60985 99 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 CNBPP62633 177 aaKnown RBP2.29□□□□□ -2.04
LINC00534-201ENST00000517400 PMCHL1Q16048 86 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 C1orf137Q5JT78 98 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 GATD1Q8NB37 220 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 OR10AG1Q8NH19 301 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 MIEN1Q9BRT3 115 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 VAMP8Q9BV40 100 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 PLAC8Q9NZF1 115 aa2.29□□□□□ -2.04
LINC00534-201ENST00000517400 FAT4Q6V0I7 4981 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.28□□□□□ -2.04
LINC00534-201ENST00000517400 IGKV2-29A2NJV5 120 aaPredicted RBP2.28□□□□□ -2.04
LINC00534-201ENST00000517400 M0R143 59 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 OR5AL1P0C617 328 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 C3orf79P0CE67 100 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 CRIP1P50238 77 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 RPS20P60866 119 aaKnown RBP2.28□□□□□ -2.04
LINC00534-201ENST00000517400 SPATA45Q537H7 98 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 TMEM97Q5BJF2 176 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 SPINK6Q6UWN8 80 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 FAM19A2Q8N3H0 131 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 PTH2Q96A98 100 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 BORCS7Q96B45 105 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 CARD19Q96LW7 228 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 AP1S3Q96PC3 154 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 SNHG12Q9BXW3 62 aa2.28□□□□□ -2.04
LINC00534-201ENST00000517400 TRAV8-4A0A0B4J246 113 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 A0A1B0GV90 55 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 LINC00614P0C842 121 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 COTL1Q14019 142 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 LYZL1Q6UWQ5 148 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 FER1L6-AS1Q8NA97 138 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 CNFNQ9BYD5 112 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 ST20Q9HBF5 79 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 LINC00474Q9P2X8 69 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 UQCR10Q9UDW1 63 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 HSPB8Q9UJY1 196 aa2.27□□□□□ -2.05
LINC00534-201ENST00000517400 D6R8Y8 96 aa2.26□□□□□ -2.05
LINC00534-201ENST00000517400 SYS1-DBNDD2H3BUS1 97 aa2.26□□□□□ -2.05
LINC00534-201ENST00000517400 TCAPO15273 167 aa2.26□□□□□ -2.05
LINC00534-201ENST00000517400 LEPROTL1O95214 131 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms