RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 HIST1H2BKO60814 126 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 HIST1H2BJP06899 126 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 VPREB1P12018 145 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 HIST1H2BOP23527 126 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 HIST1H2BBP33778 126 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 HIST1H2BDP58876 126 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 HIST1H2BCP62807 126 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 HIST2H2BEQ16778 126 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 HIST1H2BHQ93079 126 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 HIST1H2BNQ99877 126 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 HIST1H2BMQ99879 126 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
SCARNA16.1-201ENST00000516133 IGLV1-50A0A075B6I6 118 aa6.75□□□□□ -1.33
SCARNA16.1-201ENST00000516133 IGKCP01834 107 aa6.75□□□□□ -1.33
SCARNA16.1-201ENST00000516133 HERVK_113P61574 105 aa6.75□□□□□ -1.33
SCARNA16.1-201ENST00000516133 MEIG1Q5JSS6 88 aa6.75□□□□□ -1.33
SCARNA16.1-201ENST00000516133 IGKV2-28A0A075B6P5 120 aa6.74□□□□□ -1.33
SCARNA16.1-201ENST00000516133 A0A0U1RRA0 63 aa6.74□□□□□ -1.33
SCARNA16.1-201ENST00000516133 LEPROTO15243 131 aa6.74□□□□□ -1.33
SCARNA16.1-201ENST00000516133 IGKV2D-28P01615 120 aa6.74□□□□□ -1.33
SCARNA16.1-201ENST00000516133 SMIM13P0DJ93 91 aa6.74□□□□□ -1.33
SCARNA16.1-201ENST00000516133 PRR26Q8N8Z3 221 aa6.74□□□□□ -1.33
SCARNA16.1-201ENST00000516133 PMCHL2Q9BQD1 86 aa6.74□□□□□ -1.33
SCARNA16.1-201ENST00000516133 J3QQQ9 107 aa6.73□□□□□ -1.33
SCARNA16.1-201ENST00000516133 KRTAP1-4P0C5Y4 121 aa6.73□□□□□ -1.33
SCARNA16.1-201ENST00000516133 RPL13AP40429 203 aaKnown RBP6.73□□□□□ -1.33
SCARNA16.1-201ENST00000516133 SYS1-DBNDD2H3BUS1 97 aa6.72□□□□□ -1.33
SCARNA16.1-201ENST00000516133 M0R378 163 aa6.72□□□□□ -1.33
SCARNA16.1-201ENST00000516133 NMUP48645 174 aa6.72□□□□□ -1.33
SCARNA16.1-201ENST00000516133 UBE2AP49459 152 aa6.72□□□□□ -1.33
SCARNA16.1-201ENST00000516133 MIR7-3HGQ8N6C7 128 aa6.72□□□□□ -1.33
SCARNA16.1-201ENST00000516133 UBR4Q5T4S7 5183 aa6.72□□□□□ -1.33
SCARNA16.1-201ENST00000516133 LGALS3P17931 250 aaKnown RBP6.71□□□□□ -1.34
SCARNA16.1-201ENST00000516133 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.34
SCARNA16.1-201ENST00000516133 COA6Q5JTJ3 125 aaKnown RBP6.71□□□□□ -1.34
SCARNA16.1-201ENST00000516133 KRTAP13-1Q8IUC0 172 aa6.71□□□□□ -1.34
SCARNA16.1-201ENST00000516133 BOD1L2Q8IYS8 172 aa6.71□□□□□ -1.34
SCARNA16.1-201ENST00000516133 Q8NDZ9 215 aa6.71□□□□□ -1.34
SCARNA16.1-201ENST00000516133 TMEM126AQ9H061 195 aa6.71□□□□□ -1.34
SCARNA16.1-201ENST00000516133 IGKV2D-26A0A0A0MRZ7 120 aa6.7□□□□□ -1.34
SCARNA16.1-201ENST00000516133 LOC107984156A0A0G2JMH3 177 aa6.69□□□□□ -1.34
SCARNA16.1-201ENST00000516133 TMEM238C9JI98 176 aa6.69□□□□□ -1.34
SCARNA16.1-201ENST00000516133 E9PLD3 99 aa6.69□□□□□ -1.34
SCARNA16.1-201ENST00000516133 PET117Q6UWS5 81 aa6.69□□□□□ -1.34
SCARNA16.1-201ENST00000516133 ARL17AQ8IVW1 177 aa6.69□□□□□ -1.34
SCARNA16.1-201ENST00000516133 LINC01545Q5VT33 79 aa6.68□□□□□ -1.34
SCARNA16.1-201ENST00000516133 FAM19A1Q7Z5A9 133 aa6.68□□□□□ -1.34
SCARNA16.1-201ENST00000516133 CRYGAP11844 174 aa6.67□□□□□ -1.34
SCARNA16.1-201ENST00000516133 MIEN1Q9BRT3 115 aa6.67□□□□□ -1.34
SCARNA16.1-201ENST00000516133 S100A1P23297 94 aa6.66□□□□□ -1.34
SCARNA16.1-201ENST00000516133 S100A12P80511 92 aa6.66□□□□□ -1.34
SCARNA16.1-201ENST00000516133 PRLHP81277 87 aa6.66□□□□□ -1.34
SCARNA16.1-201ENST00000516133 DAND5Q8N907 189 aa6.66□□□□□ -1.34
SCARNA16.1-201ENST00000516133 TRBV10-2A0A0K0K1G8 114 aa6.65□□□□□ -1.34
SCARNA16.1-201ENST00000516133 PRYO14603 147 aa6.65□□□□□ -1.34
SCARNA16.1-201ENST00000516133 NCR3O14931 201 aa6.65□□□□□ -1.34
SCARNA16.1-201ENST00000516133 C3orf79P0CE67 100 aa6.65□□□□□ -1.34
SCARNA16.1-201ENST00000516133 FAM229BQ4G0N7 80 aa6.65□□□□□ -1.34
SCARNA16.1-201ENST00000516133 KCNQ1DNQ9H478 68 aa6.65□□□□□ -1.34
SCARNA16.1-201ENST00000516133 A0A0J9YXY3 114 aa6.64□□□□□ -1.35
SCARNA16.1-201ENST00000516133 KRTDAPP60985 99 aa6.64□□□□□ -1.35
SCARNA16.1-201ENST00000516133 LINC00337Q8N6G1 96 aa6.64□□□□□ -1.35
SCARNA16.1-201ENST00000516133 A0A087X002 238 aa6.63□□□□□ -1.35
SCARNA16.1-201ENST00000516133 TRBV10-3A0A0K0K1G6 114 aa6.63□□□□□ -1.35
SCARNA16.1-201ENST00000516133 C20orf202A1L168 122 aa6.63□□□□□ -1.35
SCARNA16.1-201ENST00000516133 NDUFC2O95298 119 aa6.63□□□□□ -1.35
SCARNA16.1-201ENST00000516133 AKR1D1P51857 326 aa6.63□□□□□ -1.35
SCARNA16.1-201ENST00000516133 TYMSOSQ8TAI1 123 aa6.63□□□□□ -1.35
SCARNA16.1-201ENST00000516133 SPANXB1Q9NS25 103 aaPredicted RBP6.63□□□□□ -1.35
SCARNA16.1-201ENST00000516133 LRP2P98164 4655 aa6.63□□□□□ -1.35
SCARNA16.1-201ENST00000516133 ETDCA0A1B0GVM5 59 aa6.62□□□□□ -1.35
SCARNA16.1-201ENST00000516133 SPRR1AP35321 89 aa6.62□□□□□ -1.35
SCARNA16.1-201ENST00000516133 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
SCARNA16.1-201ENST00000516133 HIGD2AQ9BW72 106 aa6.62□□□□□ -1.35
SCARNA16.1-201ENST00000516133 ANAPC11Q9NYG5 84 aa6.62□□□□□ -1.35
SCARNA16.1-201ENST00000516133 TIMM17BO60830 172 aa6.61□□□□□ -1.35
SCARNA16.1-201ENST00000516133 DDTP30046 118 aa6.61□□□□□ -1.35
SCARNA16.1-201ENST00000516133 S100A7L2Q5SY68 101 aa6.61□□□□□ -1.35
SCARNA16.1-201ENST00000516133 ZNF815PA8K554 130 aa6.6□□□□□ -1.35
SCARNA16.1-201ENST00000516133 KRTAP4-16G5E9R7 235 aaPredicted RBP6.6□□□□□ -1.35
SCARNA16.1-201ENST00000516133 ZNF706Q9Y5V0 76 aaPredicted RBP6.6□□□□□ -1.35
SCARNA16.1-201ENST00000516133 IGLV6-57P01721 117 aa6.59□□□□□ -1.35
SCARNA16.1-201ENST00000516133 CBY1Q9Y3M2 126 aa6.59□□□□□ -1.35
SCARNA16.1-201ENST00000516133 NPC2P61916 151 aa6.58□□□□□ -1.36
SCARNA16.1-201ENST00000516133 KRTAP13-2Q52LG2 175 aa6.58□□□□□ -1.36
SCARNA16.1-201ENST00000516133 SOSTDC1Q6X4U4 206 aa6.58□□□□□ -1.36
SCARNA16.1-201ENST00000516133 LINC00308Q8TCZ7 52 aa6.58□□□□□ -1.36
SCARNA16.1-201ENST00000516133 SPRR4Q96PI1 79 aa6.58□□□□□ -1.36
SCARNA16.1-201ENST00000516133 LITAFQ99732 161 aa6.58□□□□□ -1.36
SCARNA16.1-201ENST00000516133 B5MCH6 92 aa6.57□□□□□ -1.36
SCARNA16.1-201ENST00000516133 EIF4EBP3O60516 100 aaPredicted RBP6.57□□□□□ -1.36
SCARNA16.1-201ENST00000516133 TSPAN13O95857 204 aa6.57□□□□□ -1.36
SCARNA16.1-201ENST00000516133 S100A2P29034 98 aa6.57□□□□□ -1.36
SCARNA16.1-201ENST00000516133 SNRPEP62304 92 aaKnown RBP6.57□□□□□ -1.36
SCARNA16.1-201ENST00000516133 SMCR5Q8TEV8 140 aa6.57□□□□□ -1.36
SCARNA16.1-201ENST00000516133 SPANXCQ9NY87 97 aa6.57□□□□□ -1.36
SCARNA16.1-201ENST00000516133 RNF213Q63HN8 5207 aa6.57□□□□□ -1.36
SCARNA16.1-201ENST00000516133 CTAG1AP78358 180 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms