RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 Q6ZR54 194 aa4.99□□□□□ -1.61
SCARNA20.1-201ENST00000516009 Q6ZRN7 208 aaPredicted RBP4.99□□□□□ -1.61
SCARNA20.1-201ENST00000516009 IGKV2-28A0A075B6P5 120 aa4.98□□□□□ -1.61
SCARNA20.1-201ENST00000516009 IGKV2D-28P01615 120 aa4.98□□□□□ -1.61
SCARNA20.1-201ENST00000516009 TLX1NBP0CAT3 122 aa4.98□□□□□ -1.61
SCARNA20.1-201ENST00000516009 GAGE2EQ4V326 116 aa4.98□□□□□ -1.61
SCARNA20.1-201ENST00000516009 GTF2H5Q6ZYL4 71 aa4.98□□□□□ -1.61
SCARNA20.1-201ENST00000516009 XAGE1AQ9HD64 81 aa4.98□□□□□ -1.61
SCARNA20.1-201ENST00000516009 GAGE2DQ9UEU5 116 aa4.98□□□□□ -1.61
SCARNA20.1-201ENST00000516009 SPCS1Q9Y6A9 102 aa4.98□□□□□ -1.61
SCARNA20.1-201ENST00000516009 DNAH2Q9P225 4427 aa4.97□□□□□ -1.61
SCARNA20.1-201ENST00000516009 LRCOL1A6NCL2 159 aa4.97□□□□□ -1.61
SCARNA20.1-201ENST00000516009 GAGE10A6NGK3 116 aa4.97□□□□□ -1.61
SCARNA20.1-201ENST00000516009 K7EP34 96 aa4.97□□□□□ -1.61
SCARNA20.1-201ENST00000516009 SCGB1C2P0DMR2 95 aa4.97□□□□□ -1.61
SCARNA20.1-201ENST00000516009 CNBPP62633 177 aaKnown RBP4.97□□□□□ -1.61
SCARNA20.1-201ENST00000516009 RPL18AQ02543 176 aaKnown RBP4.97□□□□□ -1.61
SCARNA20.1-201ENST00000516009 Q6ZRP5 223 aa4.97□□□□□ -1.61
SCARNA20.1-201ENST00000516009 LINC00337Q8N6G1 96 aa4.97□□□□□ -1.61
SCARNA20.1-201ENST00000516009 OR13C6PQ8NH95 151 aa4.97□□□□□ -1.61
SCARNA20.1-201ENST00000516009 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.96□□□□□ -1.62
SCARNA20.1-201ENST00000516009 LOC107984640A0A0U1RRK4 108 aa4.96□□□□□ -1.62
SCARNA20.1-201ENST00000516009 NCR3O14931 201 aa4.96□□□□□ -1.62
SCARNA20.1-201ENST00000516009 COX6CP09669 75 aa4.96□□□□□ -1.62
SCARNA20.1-201ENST00000516009 UBE2V1Q13404 147 aa4.96□□□□□ -1.62
SCARNA20.1-201ENST00000516009 C1orf134Q5TEV5 83 aa4.96□□□□□ -1.62
SCARNA20.1-201ENST00000516009 TRBV10-2A0A0K0K1G8 114 aa4.95□□□□□ -1.62
SCARNA20.1-201ENST00000516009 TRIAP1O43715 76 aa4.95□□□□□ -1.62
SCARNA20.1-201ENST00000516009 PRR3P79522 188 aaKnown RBP4.95□□□□□ -1.62
SCARNA20.1-201ENST00000516009 S100A7L2Q5SY68 101 aa4.95□□□□□ -1.62
SCARNA20.1-201ENST00000516009 Q8NDZ9 215 aa4.95□□□□□ -1.62
SCARNA20.1-201ENST00000516009 DNAH17Q9UFH2 4485 aa4.94□□□□□ -1.62
SCARNA20.1-201ENST00000516009 TRBV20-1A0A075B6N2 111 aa4.94□□□□□ -1.62
SCARNA20.1-201ENST00000516009 A0A087WTM6 91 aa4.94□□□□□ -1.62
SCARNA20.1-201ENST00000516009 VPREB1P12018 145 aa4.94□□□□□ -1.62
SCARNA20.1-201ENST00000516009 RPL28P46779 137 aaKnown RBP4.94□□□□□ -1.62
SCARNA20.1-201ENST00000516009 GAGE2BQ13066 116 aa4.94□□□□□ -1.62
SCARNA20.1-201ENST00000516009 C9orf129Q5T035 196 aaKnown RBP4.94□□□□□ -1.62
SCARNA20.1-201ENST00000516009 Q8N814 137 aa4.94□□□□□ -1.62
SCARNA20.1-201ENST00000516009 TMEM126AQ9H061 195 aa4.94□□□□□ -1.62
SCARNA20.1-201ENST00000516009 PKIGQ9Y2B9 76 aa4.94□□□□□ -1.62
SCARNA20.1-201ENST00000516009 KMT2AQ03164 3969 aa4.94□□□□□ -1.62
SCARNA20.1-201ENST00000516009 TCL1BO95988 128 aa4.93□□□□□ -1.62
SCARNA20.1-201ENST00000516009 SMIM11BQ8TCY0 68 aa4.93□□□□□ -1.62
SCARNA20.1-201ENST00000516009 PLA2G2DQ9UNK4 145 aa4.93□□□□□ -1.62
SCARNA20.1-201ENST00000516009 H3BMG7 143 aa4.92□□□□□ -1.62
SCARNA20.1-201ENST00000516009 M0R378 163 aa4.92□□□□□ -1.62
SCARNA20.1-201ENST00000516009 C9orf163Q8N9P6 203 aa4.92□□□□□ -1.62
SCARNA20.1-201ENST00000516009 NKAPP1Q8N9T2 125 aa4.92□□□□□ -1.62
SCARNA20.1-201ENST00000516009 TRBV10-3A0A0K0K1G6 114 aa4.91□□□□□ -1.62
SCARNA20.1-201ENST00000516009 C16orf90A8MZG2 172 aa4.91□□□□□ -1.62
SCARNA20.1-201ENST00000516009 IGLV6-57P01721 117 aa4.91□□□□□ -1.62
SCARNA20.1-201ENST00000516009 ATXN8Q156A1 80 aa4.91□□□□□ -1.62
SCARNA20.1-201ENST00000516009 SERTAD4-AS1Q5TG53 156 aa4.91□□□□□ -1.62
SCARNA20.1-201ENST00000516009 CBY1Q9Y3M2 126 aa4.91□□□□□ -1.62
SCARNA20.1-201ENST00000516009 SACSQ9NZJ4 4579 aa4.91□□□□□ -1.62
SCARNA20.1-201ENST00000516009 IGLV5-37A0A075B6J1 123 aa4.9□□□□□ -1.63
SCARNA20.1-201ENST00000516009 A0A096LNI7 61 aa4.9□□□□□ -1.63
SCARNA20.1-201ENST00000516009 IGKV2-24A0A0C4DH68 120 aa4.9□□□□□ -1.63
SCARNA20.1-201ENST00000516009 H0YGX0 51 aa4.9□□□□□ -1.63
SCARNA20.1-201ENST00000516009 CLEC2BQ92478 149 aa4.9□□□□□ -1.63
SCARNA20.1-201ENST00000516009 TRAV23DV6A0A075B6W5 121 aa4.89□□□□□ -1.63
SCARNA20.1-201ENST00000516009 FAM168BA1KXE4 195 aa4.89□□□□□ -1.63
SCARNA20.1-201ENST00000516009 LST1O00453 97 aa4.89□□□□□ -1.63
SCARNA20.1-201ENST00000516009 RTL8CO15255 209 aa4.89□□□□□ -1.63
SCARNA20.1-201ENST00000516009 C6orf99Q4VX62 202 aa4.89□□□□□ -1.63
SCARNA20.1-201ENST00000516009 FAM19A5Q7Z5A7 132 aaPredicted RBP4.89□□□□□ -1.63
SCARNA20.1-201ENST00000516009 HYDINQ4G0P3 5121 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 LCE6AA0A183 80 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 C9JAW5 83 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 F8W1H4 67 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 TNP2Q05952 138 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 LINC01620Q4KN68 170 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 SDIM1Q6ZPB5 146 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 C7orf33Q8WU49 177 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 DIRC1Q969H9 104 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 LINC00474Q9P2X8 69 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 C22orf24Q9Y442 160 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 FRAS1Q86XX4 4008 aa4.88□□□□□ -1.63
SCARNA20.1-201ENST00000516009 IGLV5-52A0A0A0MRZ9 124 aa4.87□□□□□ -1.63
SCARNA20.1-201ENST00000516009 TRACP01848 142 aa4.87□□□□□ -1.63
SCARNA20.1-201ENST00000516009 CHTF8P0CG12 524 aa4.87□□□□□ -1.63
SCARNA20.1-201ENST00000516009 MRPL55Q7Z7F7 128 aaKnown RBP4.87□□□□□ -1.63
SCARNA20.1-201ENST00000516009 KRTAP7-1Q8IUC3 87 aa4.87□□□□□ -1.63
SCARNA20.1-201ENST00000516009 MTURNQ8N3F0 131 aa4.87□□□□□ -1.63
SCARNA20.1-201ENST00000516009 PRO0461Q9UI25 63 aa4.87□□□□□ -1.63
SCARNA20.1-201ENST00000516009 HECTD4Q9Y4D8 3996 aa4.86□□□□□ -1.63
SCARNA20.1-201ENST00000516009 DNAH11Q96DT5 4516 aa4.86□□□□□ -1.63
SCARNA20.1-201ENST00000516009 A0A1W2PNN7 141 aa4.86□□□□□ -1.63
SCARNA20.1-201ENST00000516009 M0QXV9 152 aa4.86□□□□□ -1.63
SCARNA20.1-201ENST00000516009 SLC25A20O43772 301 aa4.86□□□□□ -1.63
SCARNA20.1-201ENST00000516009 ZNF73O43830 326 aaPredicted RBP4.86□□□□□ -1.63
SCARNA20.1-201ENST00000516009 SNCGO76070 127 aa4.86□□□□□ -1.63
SCARNA20.1-201ENST00000516009 FAM218AQ96MZ4 157 aa4.86□□□□□ -1.63
SCARNA20.1-201ENST00000516009 LINC00167Q96N53 147 aa4.86□□□□□ -1.63
SCARNA20.1-201ENST00000516009 IGLV1-50A0A075B6I6 118 aa4.85□□□□□ -1.63
SCARNA20.1-201ENST00000516009 A0A087WYN8 130 aa4.85□□□□□ -1.63
SCARNA20.1-201ENST00000516009 TRBV7-6A0A0J9YX20 115 aa4.85□□□□□ -1.63
SCARNA20.1-201ENST00000516009 A0A1B0GX51 115 aa4.85□□□□□ -1.63
SCARNA20.1-201ENST00000516009 RPL37AP8A6NKH3 93 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms