RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 C6orf201Q7Z4U5 140 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 EXOC3-AS1Q8N2X6 119 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 PACRGLQ8N7B6 248 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 TERB2Q8NHR7 220 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 PP6455Q8WZ26 134 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 DPH3Q96FX2 82 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 ZC2HC1AQ96GY0 325 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 C2orf88Q9BSF0 95 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 PDCD10Q9BUL8 212 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 TTTY13Q9BZ97 58 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 MED9Q9NWA0 146 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 TAS2R4Q9NYW5 299 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 HIGD1AQ9Y241 93 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 U3KQ87 197 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.28
LINC01088-211ENST00000515597 A0A087WX48 190 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 TRGV1A0A0A0MS02 117 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 TRAV13-1A0A0B4J241 112 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 TRBV7-6A0A0J9YX20 115 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 LOC107984640A0A0U1RRK4 108 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 DLEU1O43261 78 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 LYRM1O43325 122 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 NCR2O95944 276 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 IFNGP01579 166 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 METTL15P1P0C7V9 234 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 SMIM6P0DI80 62 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 LINC00694P0DN24 101 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 S100PP25815 95 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 RAB5CP51148 216 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 TMBIM6P55061 237 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 RRAS2P62070 204 aaPredicted RBP0.83□□□□□ -2.28
LINC01088-211ENST00000515597 HBBP68871 147 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 HSD17B12Q53GQ0 312 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 C1orf137Q5JT78 98 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 SPANXN5Q5MJ07 72 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 XAF1Q6GPH4 301 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 HRCT1Q6UXD1 115 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 PHF5AQ7RTV0 110 aaKnown RBP0.83□□□□□ -2.28
LINC01088-211ENST00000515597 LINC00305Q7Z4B0 112 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.83□□□□□ -2.28
LINC01088-211ENST00000515597 OR5H6Q8NGV6 325 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 ATP6V0E2Q8NHE4 81 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 ZNF431Q8TF32 576 aaPredicted RBP0.83□□□□□ -2.28
LINC01088-211ENST00000515597 BRK1Q8WUW1 75 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 COPS9Q8WXC6 57 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 PRELID3AQ96N28 172 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 IMMP2LQ96T52 175 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 PRADC1Q9BSG0 188 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 NPCDR1Q9BY65 106 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 LPAR5Q9H1C0 372 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 LINC00846Q9NV44 126 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 BET1LQ9NYM9 111 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 OR5AC2Q9NZP5 309 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 TP73-AS1Q9UF72 201 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 NAT8Q9UHE5 227 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 NAT8BQ9UHF3 227 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 GNG8Q9UK08 70 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 ERG28Q9UKR5 140 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 BAIAP2Q9UQB8 552 aa0.83□□□□□ -2.28
LINC01088-211ENST00000515597 TRAV7A0A075B6U4 112 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 TRBV6-7A0A0A0MS04 114 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 IGHV1-58A0A0C4DH39 117 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 TRBV10-2A0A0K0K1G8 114 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 PNMA8CA0A1B0GUJ8 204 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 A0A1B0GV90 55 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 BBIP1A8MTZ0 92 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 A8MWV9 139 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 LINC00587B1AMM8 73 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 C17orf112F2Z3M2 114 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 H3BT86 120 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 H7BYZ3 331 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 H7C2G1 150 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 TIMM17BO60830 172 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 CXCL1P09341 107 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 TRAPPC2P0DI81 140 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 TRAPPC2BP0DI82 140 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 TPT1P13693 172 aaKnown RBP0.82□□□□□ -2.28
LINC01088-211ENST00000515597 RPL28P46779 137 aaKnown RBP0.82□□□□□ -2.28
LINC01088-211ENST00000515597 ZNF80P51504 273 aaPredicted RBP0.82□□□□□ -2.28
LINC01088-211ENST00000515597 FXYD2P54710 66 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 SNRPD3P62318 126 aaKnown RBP0.82□□□□□ -2.28
LINC01088-211ENST00000515597 RPS25P62851 125 aaKnown RBP0.82□□□□□ -2.28
LINC01088-211ENST00000515597 QRFPP83859 136 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 PRCDQ00LT1 54 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 HIST1H1AQ02539 215 aaPredicted RBP0.82□□□□□ -2.28
LINC01088-211ENST00000515597 GLIPR1L1Q6UWM5 242 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 C7orf65Q6ZTY9 151 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 ATOH7Q8N100 152 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 TP53RKQ96S44 253 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 C12orf57Q99622 126 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 TMEM191AQ9H0A3 160 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 OTORQ9NRC9 128 aa0.82□□□□□ -2.28
LINC01088-211ENST00000515597 MUC5ACP98088 5654 aa0.81□□□□□ -2.28
LINC01088-211ENST00000515597 IGKV2D-26A0A0A0MRZ7 120 aa0.81□□□□□ -2.28
LINC01088-211ENST00000515597 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.81□□□□□ -2.28
LINC01088-211ENST00000515597 TRAV1-1A0A0B4J248 108 aa0.81□□□□□ -2.28
LINC01088-211ENST00000515597 TRAV12-3A0A0B4J271 114 aa0.81□□□□□ -2.28
LINC01088-211ENST00000515597 TRBV27A0A0K0K1C4 114 aa0.81□□□□□ -2.28
LINC01088-211ENST00000515597 ZNF670-ZNF695F2Z2N8 137 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms