RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 PTHLHP12272 177 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 TPT1P13693 172 aaKnown RBP0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 PRR9Q5T870 116 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 ZCCHC23Q6ZST2 131 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 FAM216BQ8N7L0 139 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 OBSCN-AS1Q96MR7 158 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 TXNL4BQ9NX01 149 aaKnown RBP0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 NINQ8N4C6 2090 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 LINC01546A6NGU7 62 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 PIRTP0C851 137 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 DYNLT1P63172 113 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 TMEM170BQ5T4T1 132 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 LINC00643Q86TS7 51 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 FAM223AQ8IWN6 122 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 CMTM2Q8TAZ6 248 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 FAM213BQ8TBF2 198 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 COPS9Q8WXC6 57 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 TTTY13Q9BZ97 58 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 MANBALQ9NQG1 85 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 DNAH8Q96JB1 4490 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 DOCK11Q5JSL3 2073 aa0.83□□□□□ -2.28
AC025539.1-201ENST00000515343 ABCA1O95477 2261 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 IGHV1-24A0A0C4DH33 117 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 UMAD1C9J7I0 102 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 H3BMM0 161 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 HCRTO43612 131 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 ACYP1P07311 99 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 MSMBP08118 114 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 XCL1P47992 114 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 CNBPP62633 177 aaKnown RBP0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 ESRGQ1W209 222 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 SPINT4Q6UDR6 99 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 MIR17HGQ75NE6 70 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 CLECL1Q8IZS7 167 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 C1orf64Q8NEQ6 169 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 UBE2WQ96B02 151 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 Q96M85 177 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 CYP4F30PQ9H0H9 118 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 UBE2D4Q9Y2X8 147 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 TRBV25-1A0A075B6N4 114 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 FXYD6-FXYD2A0A087WZ82 144 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 IGKV2D-26A0A0A0MRZ7 120 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 TRAV22A0A0B4J277 110 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 FAM24AA6NFZ4 105 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 FAM223BA6NKX1 122 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 C17orf98A8MV24 154 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 NDUFC1O43677 76 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 PIPP12273 146 aaPredicted RBP0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 MIFP14174 115 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 PEBP1P30086 187 aaKnown RBP0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 FXYD2P54710 66 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 KRTAP2-1Q9BYU5 128 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 SLC25A20O43772 301 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 LY6G6CO95867 125 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 ZNF22P17026 224 aaPredicted RBP0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 SOSTDC1Q6X4U4 206 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 CNEP1R1Q8N9A8 125 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 ZCCHC13Q8WW36 166 aaKnown RBP0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 LINC00467Q9BRT7 94 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 CMC2Q9NRP2 79 aa0.82□□□□□ -2.28
AC025539.1-201ENST00000515343 NAP1L6A6NFF2 107 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 GNGT2O14610 69 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 SH2D1AO60880 128 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 S100A4P26447 101 aaKnown RBP0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 LY6EQ16553 131 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 GDF5OSQ5U4N7 250 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 C20orf166-AS1Q96NR2 134 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 AP1S3Q96PC3 154 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 NPCDR1Q9BY65 106 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 ICOSQ9Y6W8 199 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 LY6HO94772 140 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 FXYD7P58549 80 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 CYP2G1PQ6ZSU1 146 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 Q8NAQ8 132 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 CLEC2BQ92478 149 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 NDUFA12Q9UI09 145 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 A0A0B4J2C4 111 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 TRBV10-3A0A0K0K1G6 114 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 A0A1B0GU33 70 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 ODF3BA8MYP8 253 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 IGHV1-69P01742 117 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 MIAQ16674 131 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 Q6JHZ5 121 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 IFI27L1Q96BM0 104 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 TMEM141Q96I45 108 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 MUC4Q99102 2169 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 TTTY12Q9BZ98 90 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 CENPEQ02224 2701 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 WNK2Q9Y3S1 2297 aa0.81□□□□□ -2.28
AC025539.1-201ENST00000515343 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 KANTRA0A1W2PQU2 76 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 SMIM13P0DJ93 91 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 C9orf163Q8N9P6 203 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 SMIM4Q8WVI0 70 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 NMES1Q9C002 83 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 J3QLW9 94 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 FXYD1O00168 92 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 PSCAO43653 123 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 TMEM136Q6ZRR5 245 aa0.8□□□□□ -2.28
AC025539.1-201ENST00000515343 OSTCQ9NRP0 149 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms