RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 Q5VSD8 79 aa1.57□□□□□ -2.16
LDHBP3-201ENST00000514909 CRIPTQ9P021 101 aa1.57□□□□□ -2.16
LDHBP3-201ENST00000514909 ZNF831Q5JPB2 1677 aa1.57□□□□□ -2.16
LDHBP3-201ENST00000514909 MYO5CQ9NQX4 1742 aa1.57□□□□□ -2.16
LDHBP3-201ENST00000514909 TTC28Q96AY4 2481 aa1.57□□□□□ -2.16
LDHBP3-201ENST00000514909 IQGAP3Q86VI3 1631 aa1.56□□□□□ -2.16
LDHBP3-201ENST00000514909 WFDC9Q8NEX5 89 aa1.56□□□□□ -2.16
LDHBP3-201ENST00000514909 POLR1AO95602 1720 aaPredicted RBP1.55□□□□□ -2.16
LDHBP3-201ENST00000514909 SPTY2D1-AS1A0A0U1RR47 76 aa1.55□□□□□ -2.16
LDHBP3-201ENST00000514909 UMAD1C9J7I0 102 aa1.55□□□□□ -2.16
LDHBP3-201ENST00000514909 IFI27P40305 119 aaPredicted RBP1.55□□□□□ -2.16
LDHBP3-201ENST00000514909 DNMBPQ6XZF7 1577 aa1.55□□□□□ -2.16
LDHBP3-201ENST00000514909 SCN11AQ9UI33 1791 aa1.54□□□□□ -2.16
LDHBP3-201ENST00000514909 UBR3Q6ZT12 1888 aa1.54□□□□□ -2.16
LDHBP3-201ENST00000514909 FRAS1Q86XX4 4008 aa1.54□□□□□ -2.16
LDHBP3-201ENST00000514909 A0A087WXM4 84 aa1.54□□□□□ -2.16
LDHBP3-201ENST00000514909 COX8AP10176 69 aa1.54□□□□□ -2.16
LDHBP3-201ENST00000514909 DEFA5Q01523 94 aa1.54□□□□□ -2.16
LDHBP3-201ENST00000514909 COL14A1Q05707 1796 aaKnown RBP1.53□□□□□ -2.16
LDHBP3-201ENST00000514909 ZNF469Q96JG9 3925 aaPredicted RBP1.52□□□□□ -2.17
LDHBP3-201ENST00000514909 CD163L1Q9NR16 1453 aa1.51□□□□□ -2.17
LDHBP3-201ENST00000514909 I3L3M4 83 aa1.51□□□□□ -2.17
LDHBP3-201ENST00000514909 SPINK6Q6UWN8 80 aa1.51□□□□□ -2.17
LDHBP3-201ENST00000514909 FBN2P35556 2912 aa1.51□□□□□ -2.17
LDHBP3-201ENST00000514909 IFI6P09912 130 aa1.5□□□□□ -2.17
LDHBP3-201ENST00000514909 RPL38P63173 70 aaKnown RBP1.5□□□□□ -2.17
LDHBP3-201ENST00000514909 FMN2Q9NZ56 1722 aa1.49□□□□□ -2.17
LDHBP3-201ENST00000514909 PLCE1Q9P212 2302 aa1.49□□□□□ -2.17
LDHBP3-201ENST00000514909 URB1O60287 2271 aaKnown RBP1.49□□□□□ -2.17
LDHBP3-201ENST00000514909 ARFGEF2Q9Y6D5 1785 aa1.49□□□□□ -2.17
LDHBP3-201ENST00000514909 DUOX2Q9NRD8 1548 aa1.48□□□□□ -2.17
LDHBP3-201ENST00000514909 PKD1L2Q7Z442 2459 aa1.47□□□□□ -2.17
LDHBP3-201ENST00000514909 C2CD3Q4AC94 2353 aa1.47□□□□□ -2.17
LDHBP3-201ENST00000514909 TIAM2Q8IVF5 1701 aa1.46□□□□□ -2.18
LDHBP3-201ENST00000514909 POLQO75417 2590 aa1.46□□□□□ -2.18
LDHBP3-201ENST00000514909 NOTCH1P46531 2555 aa1.46□□□□□ -2.18
LDHBP3-201ENST00000514909 CPSF4LA6NMK7 179 aaKnown RBP1.46□□□□□ -2.18
LDHBP3-201ENST00000514909 CACNA1AO00555 2505 aa1.46□□□□□ -2.18
LDHBP3-201ENST00000514909 ANK2Q01484 3957 aa1.46□□□□□ -2.18
LDHBP3-201ENST00000514909 SPRR1AP35321 89 aa1.45□□□□□ -2.18
LDHBP3-201ENST00000514909 DOT1LQ8TEK3 1739 aa1.45□□□□□ -2.18
LDHBP3-201ENST00000514909 CFAP43Q8NDM7 1665 aa1.45□□□□□ -2.18
LDHBP3-201ENST00000514909 CLIP1P30622 1438 aa1.44□□□□□ -2.18
LDHBP3-201ENST00000514909 LCE6AA0A183 80 aa1.44□□□□□ -2.18
LDHBP3-201ENST00000514909 PRH1P02810 166 aa1.44□□□□□ -2.18
LDHBP3-201ENST00000514909 SPRR1BP22528 89 aa1.44□□□□□ -2.18
LDHBP3-201ENST00000514909 MRPL34Q9BQ48 92 aaKnown RBP1.44□□□□□ -2.18
LDHBP3-201ENST00000514909 ADAMTS12P58397 1594 aa1.43□□□□□ -2.18
LDHBP3-201ENST00000514909 USF3Q68DE3 2245 aa1.43□□□□□ -2.18
LDHBP3-201ENST00000514909 ANKRD50Q9ULJ7 1429 aa1.43□□□□□ -2.18
LDHBP3-201ENST00000514909 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
LDHBP3-201ENST00000514909 NREPQ16612 68 aa1.43□□□□□ -2.18
LDHBP3-201ENST00000514909 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
LDHBP3-201ENST00000514909 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
LDHBP3-201ENST00000514909 DOPEY2Q9Y3R5 2298 aa1.43□□□□□ -2.18
LDHBP3-201ENST00000514909 ZC3H13Q5T200 1668 aaKnown RBP1.42□□□□□ -2.18
LDHBP3-201ENST00000514909 SPTBN2O15020 2390 aa1.42□□□□□ -2.18
LDHBP3-201ENST00000514909 BCORQ6W2J9 1755 aa1.42□□□□□ -2.18
LDHBP3-201ENST00000514909 HMGA1P17096 107 aaKnown RBP1.42□□□□□ -2.18
LDHBP3-201ENST00000514909 HEPN1Q6WQI6 88 aa1.42□□□□□ -2.18
LDHBP3-201ENST00000514909 PREX1Q8TCU6 1659 aa1.42□□□□□ -2.18
LDHBP3-201ENST00000514909 TSC2P49815 1807 aa1.41□□□□□ -2.18
LDHBP3-201ENST00000514909 Q5BKY6 102 aa1.41□□□□□ -2.18
LDHBP3-201ENST00000514909 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
LDHBP3-201ENST00000514909 PIEZO2Q9H5I5 2752 aa1.41□□□□□ -2.18
LDHBP3-201ENST00000514909 BDP1A6H8Y1 2624 aa1.4□□□□□ -2.18
LDHBP3-201ENST00000514909 ABCA12Q86UK0 2595 aa1.4□□□□□ -2.19
LDHBP3-201ENST00000514909 CCL22O00626 93 aa1.4□□□□□ -2.19
LDHBP3-201ENST00000514909 CACNA1EQ15878 2313 aa1.4□□□□□ -2.19
LDHBP3-201ENST00000514909 CELSR2Q9HCU4 2923 aa1.39□□□□□ -2.19
LDHBP3-201ENST00000514909 SMR3AQ99954 134 aa1.38□□□□□ -2.19
LDHBP3-201ENST00000514909 NWD1Q149M9 1564 aa1.38□□□□□ -2.19
LDHBP3-201ENST00000514909 EIF2AK4Q9P2K8 1649 aaKnown RBP1.37□□□□□ -2.19
LDHBP3-201ENST00000514909 PTPRZ1P23471 2315 aaPredicted RBP1.36□□□□□ -2.19
LDHBP3-201ENST00000514909 USP24Q9UPU5 2620 aa1.36□□□□□ -2.19
LDHBP3-201ENST00000514909 APCP25054 2843 aa1.35□□□□□ -2.19
LDHBP3-201ENST00000514909 F8P00451 2351 aa1.35□□□□□ -2.19
LDHBP3-201ENST00000514909 SMIM31A0A1B0GVY4 71 aa1.35□□□□□ -2.19
LDHBP3-201ENST00000514909 DEFB105AQ8NG35 78 aa1.35□□□□□ -2.19
LDHBP3-201ENST00000514909 CHD9Q3L8U1 2897 aa1.34□□□□□ -2.19
LDHBP3-201ENST00000514909 LMTK2Q8IWU2 1503 aa1.34□□□□□ -2.2
LDHBP3-201ENST00000514909 CICQ96RK0 1608 aaPredicted RBP1.33□□□□□ -2.2
LDHBP3-201ENST00000514909 PTPRQQ9UMZ3 2332 aa1.33□□□□□ -2.2
LDHBP3-201ENST00000514909 H3BVH4 76 aa1.33□□□□□ -2.2
LDHBP3-201ENST00000514909 ERICH3Q5RHP9 1530 aa1.33□□□□□ -2.2
LDHBP3-201ENST00000514909 TNCP24821 2201 aa1.32□□□□□ -2.2
LDHBP3-201ENST00000514909 ASXL1Q8IXJ9 1541 aa1.32□□□□□ -2.2
LDHBP3-201ENST00000514909 DEFB109BQ30KR1 87 aa1.32□□□□□ -2.2
LDHBP3-201ENST00000514909 COX6B2Q6YFQ2 88 aa1.32□□□□□ -2.2
LDHBP3-201ENST00000514909 CDC42BPGQ6DT37 1551 aa1.32□□□□□ -2.2
LDHBP3-201ENST00000514909 ZNF292O60281 2723 aa1.32□□□□□ -2.2
LDHBP3-201ENST00000514909 MROH1Q8NDA8 1641 aa1.32□□□□□ -2.2
LDHBP3-201ENST00000514909 ITSN1Q15811 1721 aa1.32□□□□□ -2.2
LDHBP3-201ENST00000514909 PARP4Q9UKK3 1724 aaKnown RBP1.32□□□□□ -2.2
LDHBP3-201ENST00000514909 APLNQ9ULZ1 77 aa1.31□□□□□ -2.2
LDHBP3-201ENST00000514909 PLCH1Q4KWH8 1693 aa1.31□□□□□ -2.2
LDHBP3-201ENST00000514909 NESP48681 1621 aa1.3□□□□□ -2.2
LDHBP3-201ENST00000514909 RICTORQ6R327 1708 aa1.3□□□□□ -2.2
LDHBP3-201ENST00000514909 EFCAB5A4FU69 1503 aa1.3□□□□□ -2.2
LDHBP3-201ENST00000514909 CSMD3Q7Z407 3707 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms