RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 TMEM170BQ5T4T1 132 aa13.87□□□□□ -0.19
CCND3-221ENST00000514588 COMMD7Q86VX2 200 aa13.87□□□□□ -0.19
CCND3-221ENST00000514588 BAGE3Q86Y29 109 aa13.87□□□□□ -0.19
CCND3-221ENST00000514588 IGLV7-46A0A075B6I9 117 aa13.86□□□□□ -0.19
CCND3-221ENST00000514588 CTAG1AP78358 180 aa13.86□□□□□ -0.19
CCND3-221ENST00000514588 SFTA2Q6UW10 78 aa13.86□□□□□ -0.19
CCND3-221ENST00000514588 CBLN2Q8IUK8 224 aa13.86□□□□□ -0.19
CCND3-221ENST00000514588 C3orf22Q8N5N4 141 aa13.86□□□□□ -0.19
CCND3-221ENST00000514588 TRAPPC1Q9Y5R8 145 aa13.86□□□□□ -0.19
CCND3-221ENST00000514588 FAT4Q6V0I7 4981 aa13.85□□□□□ -0.19
CCND3-221ENST00000514588 LCE2AQ5TA79 106 aaPredicted RBP13.85□□□□□ -0.19
CCND3-221ENST00000514588 CDIP1Q9H305 208 aa13.85□□□□□ -0.19
CCND3-221ENST00000514588 HIGD2AQ9BW72 106 aa13.84□□□□□ -0.19
CCND3-221ENST00000514588 LINC00158P58513 81 aa13.81□□□□□ -0.2
CCND3-221ENST00000514588 KRTAP9-2Q9BYQ4 174 aa13.8□□□□□ -0.2
CCND3-221ENST00000514588 SPRR4Q96PI1 79 aa13.79□□□□□ -0.2
CCND3-221ENST00000514588 CHTOPQ9Y3Y2 248 aaKnown RBP13.79□□□□□ -0.2
CCND3-221ENST00000514588 MUC17Q685J3 4493 aa13.79□□□□□ -0.2
CCND3-221ENST00000514588 A0A0U1RRA0 63 aa13.78□□□□□ -0.2
CCND3-221ENST00000514588 TMEM223A0PJW6 202 aa13.77□□□□□ -0.21
CCND3-221ENST00000514588 PPDPFQ9H3Y8 114 aa13.76□□□□□ -0.21
CCND3-221ENST00000514588 SPAG11AQ6PDA7 123 aa13.75□□□□□ -0.21
CCND3-221ENST00000514588 SMIM13P0DJ93 91 aa13.73□□□□□ -0.21
CCND3-221ENST00000514588 TRAV12-1A0A0B4J245 112 aa13.72□□□□□ -0.21
CCND3-221ENST00000514588 BOD1L2Q8IYS8 172 aa13.72□□□□□ -0.21
CCND3-221ENST00000514588 ZNF706Q9Y5V0 76 aaPredicted RBP13.72□□□□□ -0.21
CCND3-221ENST00000514588 PRYO14603 147 aa13.71□□□□□ -0.21
CCND3-221ENST00000514588 IFI27L1Q96BM0 104 aa13.7□□□□□ -0.22
CCND3-221ENST00000514588 NCR3O14931 201 aa13.69□□□□□ -0.22
CCND3-221ENST00000514588 ATP6V1G1O75348 118 aa13.69□□□□□ -0.22
CCND3-221ENST00000514588 SPRR1AP35321 89 aa13.69□□□□□ -0.22
CCND3-221ENST00000514588 LINC00337Q8N6G1 96 aa13.69□□□□□ -0.22
CCND3-221ENST00000514588 KCNQ1DNQ9H478 68 aa13.69□□□□□ -0.22
CCND3-221ENST00000514588 C4orf48Q5BLP8 95 aa13.68□□□□□ -0.22
CCND3-221ENST00000514588 MIR7-3HGQ8N6C7 128 aa13.68□□□□□ -0.22
CCND3-221ENST00000514588 KRTAP4-16G5E9R7 235 aaPredicted RBP13.67□□□□□ -0.22
CCND3-221ENST00000514588 MEIG1Q5JSS6 88 aa13.67□□□□□ -0.22
CCND3-221ENST00000514588 FP248Q71RG6 208 aaPredicted RBP13.67□□□□□ -0.22
CCND3-221ENST00000514588 DAND5Q8N907 189 aa13.67□□□□□ -0.22
CCND3-221ENST00000514588 Q8NBF4 154 aa13.67□□□□□ -0.22
CCND3-221ENST00000514588 CHCHD1Q96BP2 118 aaKnown RBP13.67□□□□□ -0.22
CCND3-221ENST00000514588 APOC3P02656 99 aa13.66□□□□□ -0.22
CCND3-221ENST00000514588 SMCR5Q8TEV8 140 aa13.66□□□□□ -0.22
CCND3-221ENST00000514588 HERV-K104P63124 156 aa13.65□□□□□ -0.22
CCND3-221ENST00000514588 TRBV10-3A0A0K0K1G6 114 aa13.63□□□□□ -0.23
CCND3-221ENST00000514588 ETDCA0A1B0GVM5 59 aa13.63□□□□□ -0.23
CCND3-221ENST00000514588 SNAPINO95295 136 aa13.62□□□□□ -0.23
CCND3-221ENST00000514588 KRTAP13-3Q3SY46 172 aa13.62□□□□□ -0.23
CCND3-221ENST00000514588 YPEL4Q96NS1 127 aa13.62□□□□□ -0.23
CCND3-221ENST00000514588 NDUFA12Q9UI09 145 aa13.62□□□□□ -0.23
CCND3-221ENST00000514588 LINC00587B1AMM8 73 aa13.6□□□□□ -0.23
CCND3-221ENST00000514588 LINC00483Q53H64 154 aa13.6□□□□□ -0.23
CCND3-221ENST00000514588 SVBPQ8N300 66 aa13.6□□□□□ -0.23
CCND3-221ENST00000514588 MYMXA0A1B0GTQ4 84 aa13.58□□□□□ -0.24
CCND3-221ENST00000514588 SPINK1P00995 79 aa13.58□□□□□ -0.24
CCND3-221ENST00000514588 FAM19A2Q8N3H0 131 aa13.58□□□□□ -0.24
CCND3-221ENST00000514588 NDUFA5Q16718 116 aa13.57□□□□□ -0.24
CCND3-221ENST00000514588 MAP1LC3CQ9BXW4 147 aa13.57□□□□□ -0.24
CCND3-221ENST00000514588 B5MCH6 92 aa13.56□□□□□ -0.24
CCND3-221ENST00000514588 GAGE2AQ6NT46 116 aa13.56□□□□□ -0.24
CCND3-221ENST00000514588 HSBP1O75506 76 aa13.55□□□□□ -0.24
CCND3-221ENST00000514588 TSPEAR-AS2P59090 65 aa13.55□□□□□ -0.24
CCND3-221ENST00000514588 ERC2-IT1O76042 136 aa13.54□□□□□ -0.24
CCND3-221ENST00000514588 LOC107984156A0A0G2JMH3 177 aa13.53□□□□□ -0.24
CCND3-221ENST00000514588 H0Y8G0 127 aa13.53□□□□□ -0.24
CCND3-221ENST00000514588 S100A12P80511 92 aa13.53□□□□□ -0.24
CCND3-221ENST00000514588 ASB16-AS1Q495Z4 193 aa13.53□□□□□ -0.24
CCND3-221ENST00000514588 ARL17AQ8IVW1 177 aa13.53□□□□□ -0.24
CCND3-221ENST00000514588 DDTP30046 118 aa13.51□□□□□ -0.25
CCND3-221ENST00000514588 MOBPQ13875 183 aa13.51□□□□□ -0.25
CCND3-221ENST00000514588 IGLV9-49A0A0B4J1Y8 123 aa13.5□□□□□ -0.25
CCND3-221ENST00000514588 LEPROTO15243 131 aa13.5□□□□□ -0.25
CCND3-221ENST00000514588 Q9BRP9 147 aa13.5□□□□□ -0.25
CCND3-221ENST00000514588 TRBV10-2A0A0K0K1G8 114 aa13.49□□□□□ -0.25
CCND3-221ENST00000514588 SSBP3-AS1Q7Z2R9 100 aa13.48□□□□□ -0.25
CCND3-221ENST00000514588 RPS29P62273 56 aaKnown RBP13.47□□□□□ -0.25
CCND3-221ENST00000514588 Q6ZRX8 168 aa13.47□□□□□ -0.25
CCND3-221ENST00000514588 Q8N377 158 aa13.47□□□□□ -0.25
CCND3-221ENST00000514588 LEPROTL1O95214 131 aa13.46□□□□□ -0.25
CCND3-221ENST00000514588 KRTAP4-1Q9BYQ7 146 aa13.46□□□□□ -0.25
CCND3-221ENST00000514588 SPANXB1Q9NS25 103 aaPredicted RBP13.46□□□□□ -0.25
CCND3-221ENST00000514588 J3QQQ9 107 aa13.45□□□□□ -0.26
CCND3-221ENST00000514588 PLNP26678 52 aa13.45□□□□□ -0.26
CCND3-221ENST00000514588 LINC00310P59036 64 aa13.45□□□□□ -0.26
CCND3-221ENST00000514588 KRTAP9-6A0A140TA67 174 aa13.43□□□□□ -0.26
CCND3-221ENST00000514588 IGLV6-57P01721 117 aa13.43□□□□□ -0.26
CCND3-221ENST00000514588 SERF1AO75920 110 aa13.42□□□□□ -0.26
CCND3-221ENST00000514588 SEC61BP60468 96 aaKnown RBP13.42□□□□□ -0.26
CCND3-221ENST00000514588 MIEN1Q9BRT3 115 aa13.42□□□□□ -0.26
CCND3-221ENST00000514588 TRGC2P03986 189 aa13.41□□□□□ -0.26
CCND3-221ENST00000514588 NMUP48645 174 aa13.41□□□□□ -0.26
CCND3-221ENST00000514588 PMCHL2Q9BQD1 86 aa13.41□□□□□ -0.26
CCND3-221ENST00000514588 SLC25A20O43772 301 aa13.4□□□□□ -0.26
CCND3-221ENST00000514588 DPM2O94777 84 aa13.4□□□□□ -0.26
CCND3-221ENST00000514588 NDUFC2O95298 119 aa13.4□□□□□ -0.26
CCND3-221ENST00000514588 S100A7L2Q5SY68 101 aa13.4□□□□□ -0.26
CCND3-221ENST00000514588 HERVK_113P61574 105 aa13.39□□□□□ -0.27
CCND3-221ENST00000514588 TRAV23DV6A0A075B6W5 121 aa13.38□□□□□ -0.27
CCND3-221ENST00000514588 LGALS3P17931 250 aaKnown RBP13.38□□□□□ -0.27
CCND3-221ENST00000514588 EIF4EBP3O60516 100 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms