RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 PCP2Q8IVA1 136 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 CEND1Q8N111 149 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 RMI2Q96E14 147 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 SPANXB1Q9NS25 103 aaPredicted RBP3.01□□□□□ -1.93
CLDND1-228ENST00000513873 Q9UF83 564 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 CELA1Q9UNI1 258 aa3.01□□□□□ -1.93
CLDND1-228ENST00000513873 KLK5Q9Y337 293 aaPredicted RBP3.01□□□□□ -1.93
CLDND1-228ENST00000513873 SRRM2Q9UQ35 2752 aaKnown RBP3□□□□□ -1.93
CLDND1-228ENST00000513873 A0A096LPF7 62 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 A0A0J9YXY3 114 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 LINC00959A0A1B0GUT2 108 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 COX7A2LO14548 114 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 NDUFA1O15239 70 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 DNAH10OSP0CZ25 163 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 IGHV3-30-3P0DP02 117 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 REG3AQ06141 175 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 MIAQ16674 131 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 MPV17L2Q567V2 206 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 C6orf226Q5I0X4 101 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 BVES-AS1Q5T3Y7 98 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 LINC00242Q5T6M2 205 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 ZFAND6Q6FIF0 208 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 C10orf126Q8N4M7 172 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 SNHG12Q9BXW3 62 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 RETNQ9HD89 108 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 CDKN2A-AS1Q9UH64 79 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 NDUFA12Q9UI09 145 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 KIAA1109Q2LD37 5005 aa3□□□□□ -1.93
CLDND1-228ENST00000513873 DMBT1Q9UGM3 2413 aaPredicted RBP3□□□□□ -1.93
CLDND1-228ENST00000513873 IGKV2D-26A0A0A0MRZ7 120 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 TRAV8-3A0A0A6YYJ7 113 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 IGKV3OR2-268A0A0C4DH90 116 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 NUPR2A6NF83 97 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 F8WDY8 70 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 SPINK8P0C7L1 97 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 CKS1BP61024 79 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 RNASE13Q5GAN3 156 aaKnown RBP2.99□□□□□ -1.93
CLDND1-228ENST00000513873 MEIG1Q5JSS6 88 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 GTF2H5Q6ZYL4 71 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 LINC00269Q8N2A0 174 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 COX7B2Q8TF08 81 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 RAB37Q96AX2 223 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 PPDPFQ9H3Y8 114 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 DHRS4-AS1Q9P1J3 65 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 TP73-AS1Q9UF72 201 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 KMT2AQ03164 3969 aa2.99□□□□□ -1.93
CLDND1-228ENST00000513873 ABCA13Q86UQ4 5058 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 IGLV4-60A0A075B6I1 120 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 IGHV3-64A0A075B6Q5 118 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 IGHV3OR16-9A0A0B4J2B5 98 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 IBA57-AS1B1ANH7 110 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 IGLL5B9A064 214 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 FABP2P12104 132 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 XCL1P47992 114 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 COX17Q14061 63 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 VAMP3Q15836 100 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 LINC01556Q5JQF7 62 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 C2orf91Q6ZV80 131 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 Q8IZM0 81 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 SPANXDQ9BXN6 97 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 SPANXCQ9NY87 97 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 TOMM7Q9P0U1 55 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 SORL1Q92673 2214 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 HERC1Q15751 4861 aa2.98□□□□□ -1.93
CLDND1-228ENST00000513873 ALMS1Q8TCU4 4167 aa2.97□□□□□ -1.93
CLDND1-228ENST00000513873 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
CLDND1-228ENST00000513873 SNCGO76070 127 aa2.97□□□□□ -1.93
CLDND1-228ENST00000513873 COX6CP09669 75 aa2.97□□□□□ -1.93
CLDND1-228ENST00000513873 COX6A2Q02221 97 aa2.97□□□□□ -1.93
CLDND1-228ENST00000513873 UBE2DNLQ8IWF7 75 aa2.97□□□□□ -1.93
CLDND1-228ENST00000513873 CHCHD10Q8WYQ3 142 aaPredicted RBP2.97□□□□□ -1.93
CLDND1-228ENST00000513873 Q9HAA7 133 aa2.97□□□□□ -1.93
CLDND1-228ENST00000513873 NHP2Q9NX24 153 aaKnown RBP2.97□□□□□ -1.93
CLDND1-228ENST00000513873 KLK12Q9UKR0 248 aa2.97□□□□□ -1.93
CLDND1-228ENST00000513873 PKIGQ9Y2B9 76 aa2.97□□□□□ -1.93
CLDND1-228ENST00000513873 CBY1Q9Y3M2 126 aa2.97□□□□□ -1.93
CLDND1-228ENST00000513873 A0A0B4J2C4 111 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 IGHV3-30P01768 117 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 IGHV3-33P01772 117 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 IGHV3-30-5P0DP03 117 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 LINC00158P58513 81 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 ESRGQ1W209 222 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 TTC32Q5I0X7 151 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 C5orf38Q86SI9 138 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 FAM104AQ969W3 186 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 UBE2WQ96B02 151 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 UPK3BQ9BT76 320 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 PRO1854Q9UHT4 67 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 ERG28Q9UKR5 140 aa2.96□□□□□ -1.94
CLDND1-228ENST00000513873 HUWE1Q7Z6Z7 4374 aaKnown RBP2.96□□□□□ -1.94
CLDND1-228ENST00000513873 TRBV20-1A0A075B6N2 111 aa2.95□□□□□ -1.94
CLDND1-228ENST00000513873 TRAV13-2A0A0B4J235 113 aa2.95□□□□□ -1.94
CLDND1-228ENST00000513873 A0A1B0GWB2 263 aa2.95□□□□□ -1.94
CLDND1-228ENST00000513873 FAM168BA1KXE4 195 aa2.95□□□□□ -1.94
CLDND1-228ENST00000513873 SCGB1C2P0DMR2 95 aa2.95□□□□□ -1.94
CLDND1-228ENST00000513873 PSMB2P49721 201 aa2.95□□□□□ -1.94
CLDND1-228ENST00000513873 TSPEAR-AS2P59090 65 aa2.95□□□□□ -1.94
CLDND1-228ENST00000513873 KRTAP13-3Q3SY46 172 aa2.95□□□□□ -1.94
CLDND1-228ENST00000513873 CLPSL2Q6UWE3 100 aa2.95□□□□□ -1.94
CLDND1-228ENST00000513873 MUSTN1Q8IVN3 82 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms