RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 TMEM170BQ5T4T1 132 aa4.35□□□□□ -1.71
HTT-212ENST00000513639 ERG28Q9UKR5 140 aa4.35□□□□□ -1.71
HTT-212ENST00000513639 A0A096LNJ9 63 aa4.34□□□□□ -1.71
HTT-212ENST00000513639 LINC00587B1AMM8 73 aa4.34□□□□□ -1.71
HTT-212ENST00000513639 ATP6V1G1O75348 118 aa4.34□□□□□ -1.71
HTT-212ENST00000513639 ZNF22P17026 224 aaPredicted RBP4.34□□□□□ -1.71
HTT-212ENST00000513639 PRR4Q16378 134 aa4.34□□□□□ -1.71
HTT-212ENST00000513639 TYMSOSQ8TAI1 123 aa4.34□□□□□ -1.71
HTT-212ENST00000513639 CHCHD1Q96BP2 118 aaKnown RBP4.34□□□□□ -1.71
HTT-212ENST00000513639 URB1-AS1Q96HZ7 61 aa4.34□□□□□ -1.71
HTT-212ENST00000513639 SND1-IT1Q9HBX3 110 aa4.34□□□□□ -1.71
HTT-212ENST00000513639 CHTOPQ9Y3Y2 248 aaKnown RBP4.34□□□□□ -1.71
HTT-212ENST00000513639 IGKV2-28A0A075B6P5 120 aa4.33□□□□□ -1.72
HTT-212ENST00000513639 TRAV12-1A0A0B4J245 112 aa4.33□□□□□ -1.72
HTT-212ENST00000513639 IGKV2D-28P01615 120 aa4.33□□□□□ -1.72
HTT-212ENST00000513639 LINC00158P58513 81 aa4.33□□□□□ -1.72
HTT-212ENST00000513639 PMCHL1Q16048 86 aa4.33□□□□□ -1.72
HTT-212ENST00000513639 FAM229BQ4G0N7 80 aa4.33□□□□□ -1.72
HTT-212ENST00000513639 LPAP08519 4548 aa4.33□□□□□ -1.72
HTT-212ENST00000513639 C11orf86A6NJI1 115 aa4.32□□□□□ -1.72
HTT-212ENST00000513639 TSPAN13O95857 204 aa4.32□□□□□ -1.72
HTT-212ENST00000513639 CTAG1AP78358 180 aa4.32□□□□□ -1.72
HTT-212ENST00000513639 IFI27L1Q96BM0 104 aa4.32□□□□□ -1.72
HTT-212ENST00000513639 ZNF625Q96I27 306 aaPredicted RBP4.32□□□□□ -1.72
HTT-212ENST00000513639 IGKV2D-26A0A0A0MRZ7 120 aa4.31□□□□□ -1.72
HTT-212ENST00000513639 M0R378 163 aa4.31□□□□□ -1.72
HTT-212ENST00000513639 VPREB1P12018 145 aa4.31□□□□□ -1.72
HTT-212ENST00000513639 FAM19A1Q7Z5A9 133 aa4.31□□□□□ -1.72
HTT-212ENST00000513639 KRTAP13-1Q8IUC0 172 aa4.31□□□□□ -1.72
HTT-212ENST00000513639 TMEM126AQ9H061 195 aa4.31□□□□□ -1.72
HTT-212ENST00000513639 MUC2Q02817 5179 aa4.31□□□□□ -1.72
HTT-212ENST00000513639 A0A087X002 238 aa4.3□□□□□ -1.72
HTT-212ENST00000513639 TMEM223A0PJW6 202 aa4.3□□□□□ -1.72
HTT-212ENST00000513639 HSBP1O75506 76 aa4.3□□□□□ -1.72
HTT-212ENST00000513639 HERV-K104P63124 156 aa4.3□□□□□ -1.72
HTT-212ENST00000513639 CBLN2Q8IUK8 224 aa4.3□□□□□ -1.72
HTT-212ENST00000513639 MAP1LC3CQ9BXW4 147 aa4.3□□□□□ -1.72
HTT-212ENST00000513639 MYMXA0A1B0GTQ4 84 aa4.29□□□□□ -1.72
HTT-212ENST00000513639 TMEM238C9JI98 176 aa4.29□□□□□ -1.72
HTT-212ENST00000513639 SCO1O75880 301 aa4.29□□□□□ -1.72
HTT-212ENST00000513639 S100A12P80511 92 aa4.29□□□□□ -1.72
HTT-212ENST00000513639 PLEKHB2Q96CS7 222 aa4.29□□□□□ -1.72
HTT-212ENST00000513639 YPEL4Q96NS1 127 aa4.29□□□□□ -1.72
HTT-212ENST00000513639 ANAPC11Q9NYG5 84 aa4.29□□□□□ -1.72
HTT-212ENST00000513639 MEIG1Q5JSS6 88 aa4.28□□□□□ -1.72
HTT-212ENST00000513639 SPAG11AQ6PDA7 123 aa4.28□□□□□ -1.72
HTT-212ENST00000513639 LINC00304Q8N9R0 145 aa4.28□□□□□ -1.72
HTT-212ENST00000513639 A0A0U1RRA0 63 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 LEPROTL1O95214 131 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 SMIM13P0DJ93 91 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 PLNP26678 52 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 PRLHP81277 87 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 KRTAP13-2Q52LG2 175 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 BOD1L2Q8IYS8 172 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 FAM19A2Q8N3H0 131 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 HIGD2AQ9BW72 106 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 KRTAP9-2Q9BYQ4 174 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 NDUFA12Q9UI09 145 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 HSPB8Q9UJY1 196 aa4.27□□□□□ -1.73
HTT-212ENST00000513639 ZNF706Q9Y5V0 76 aaPredicted RBP4.27□□□□□ -1.73
HTT-212ENST00000513639 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
HTT-212ENST00000513639 TRGC2P03986 189 aa4.26□□□□□ -1.73
HTT-212ENST00000513639 MIR7-3HGQ8N6C7 128 aa4.26□□□□□ -1.73
HTT-212ENST00000513639 KCNQ1DNQ9H478 68 aa4.26□□□□□ -1.73
HTT-212ENST00000513639 A0A0U1RQV1 116 aa4.25□□□□□ -1.73
HTT-212ENST00000513639 ETDCA0A1B0GVM5 59 aa4.25□□□□□ -1.73
HTT-212ENST00000513639 H0Y8G0 127 aa4.25□□□□□ -1.73
HTT-212ENST00000513639 PRYO14603 147 aa4.25□□□□□ -1.73
HTT-212ENST00000513639 LEPROTO15243 131 aa4.25□□□□□ -1.73
HTT-212ENST00000513639 NMUP48645 174 aa4.25□□□□□ -1.73
HTT-212ENST00000513639 HERVK_113P61574 105 aa4.25□□□□□ -1.73
HTT-212ENST00000513639 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
HTT-212ENST00000513639 LINC00337Q8N6G1 96 aa4.25□□□□□ -1.73
HTT-212ENST00000513639 Q8NDZ9 215 aa4.25□□□□□ -1.73
HTT-212ENST00000513639 LOC107984156A0A0G2JMH3 177 aa4.24□□□□□ -1.73
HTT-212ENST00000513639 TRBV10-2A0A0K0K1G8 114 aa4.24□□□□□ -1.73
HTT-212ENST00000513639 J3QQQ9 107 aa4.24□□□□□ -1.73
HTT-212ENST00000513639 DPM2O94777 84 aa4.24□□□□□ -1.73
HTT-212ENST00000513639 ARL17AQ8IVW1 177 aa4.24□□□□□ -1.73
HTT-212ENST00000513639 SPRR4Q96PI1 79 aa4.24□□□□□ -1.73
HTT-212ENST00000513639 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
HTT-212ENST00000513639 SERF1AO75920 110 aa4.23□□□□□ -1.73
HTT-212ENST00000513639 IGKCP01834 107 aa4.23□□□□□ -1.73
HTT-212ENST00000513639 FABP4P15090 132 aa4.23□□□□□ -1.73
HTT-212ENST00000513639 LGALS3P17931 250 aaKnown RBP4.23□□□□□ -1.73
HTT-212ENST00000513639 SPRR1AP35321 89 aa4.23□□□□□ -1.73
HTT-212ENST00000513639 SMCR5Q8TEV8 140 aa4.23□□□□□ -1.73
HTT-212ENST00000513639 MIEN1Q9BRT3 115 aa4.23□□□□□ -1.73
HTT-212ENST00000513639 CBY1Q9Y3M2 126 aa4.23□□□□□ -1.73
HTT-212ENST00000513639 IGLV7-46A0A075B6I9 117 aa4.22□□□□□ -1.73
HTT-212ENST00000513639 TRBV10-3A0A0K0K1G6 114 aa4.22□□□□□ -1.73
HTT-212ENST00000513639 NCR3O14931 201 aa4.22□□□□□ -1.73
HTT-212ENST00000513639 COLCA2A8K830 154 aa4.21□□□□□ -1.74
HTT-212ENST00000513639 KRTAP4-16G5E9R7 235 aaPredicted RBP4.21□□□□□ -1.74
HTT-212ENST00000513639 NDUFC2O95298 119 aa4.21□□□□□ -1.74
HTT-212ENST00000513639 SPINK1P00995 79 aa4.21□□□□□ -1.74
HTT-212ENST00000513639 DDTP30046 118 aa4.21□□□□□ -1.74
HTT-212ENST00000513639 JOSD1Q15040 202 aaPredicted RBP4.21□□□□□ -1.74
HTT-212ENST00000513639 S100A7L2Q5SY68 101 aa4.21□□□□□ -1.74
HTT-212ENST00000513639 C3orf22Q8N5N4 141 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms