RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 C4orf48Q5BLP8 95 aa6.36□□□□□ -1.39
SKP2-207ENST00000513263 ANAPC11Q9NYG5 84 aa6.36□□□□□ -1.39
SKP2-207ENST00000513263 LINC00587B1AMM8 73 aa6.35□□□□□ -1.39
SKP2-207ENST00000513263 M0R378 163 aa6.35□□□□□ -1.39
SKP2-207ENST00000513263 APOC3P02656 99 aa6.35□□□□□ -1.39
SKP2-207ENST00000513263 C10orf91Q5T1B1 145 aa6.35□□□□□ -1.39
SKP2-207ENST00000513263 PLEKHB2Q96CS7 222 aa6.35□□□□□ -1.39
SKP2-207ENST00000513263 RETNLBQ9BQ08 111 aa6.35□□□□□ -1.39
SKP2-207ENST00000513263 HIGD2AQ9BW72 106 aa6.35□□□□□ -1.39
SKP2-207ENST00000513263 TMEM238C9JI98 176 aa6.34□□□□□ -1.39
SKP2-207ENST00000513263 PRYO14603 147 aa6.34□□□□□ -1.39
SKP2-207ENST00000513263 LINC00614P0C842 121 aa6.34□□□□□ -1.39
SKP2-207ENST00000513263 TMEM170BQ5T4T1 132 aa6.34□□□□□ -1.39
SKP2-207ENST00000513263 SVBPQ8N300 66 aa6.34□□□□□ -1.39
SKP2-207ENST00000513263 TMEM238LA0A1B0GVL6 79 aa6.33□□□□□ -1.4
SKP2-207ENST00000513263 ATP6V1G1O75348 118 aa6.33□□□□□ -1.4
SKP2-207ENST00000513263 SCO1O75880 301 aa6.33□□□□□ -1.4
SKP2-207ENST00000513263 SNAPINO95295 136 aa6.33□□□□□ -1.4
SKP2-207ENST00000513263 FAM19A2Q8N3H0 131 aa6.33□□□□□ -1.4
SKP2-207ENST00000513263 ZNF625Q96I27 306 aaPredicted RBP6.33□□□□□ -1.4
SKP2-207ENST00000513263 PPDPFQ9H3Y8 114 aa6.33□□□□□ -1.4
SKP2-207ENST00000513263 NDUFA12Q9UI09 145 aa6.33□□□□□ -1.4
SKP2-207ENST00000513263 LINC00158P58513 81 aa6.32□□□□□ -1.4
SKP2-207ENST00000513263 LCE2AQ5TA79 106 aaPredicted RBP6.32□□□□□ -1.4
SKP2-207ENST00000513263 BAGE3Q86Y29 109 aa6.32□□□□□ -1.4
SKP2-207ENST00000513263 C18orf32Q8TCD1 76 aa6.32□□□□□ -1.4
SKP2-207ENST00000513263 SPRR4Q96PI1 79 aa6.32□□□□□ -1.4
SKP2-207ENST00000513263 KRTAP9-2Q9BYQ4 174 aa6.32□□□□□ -1.4
SKP2-207ENST00000513263 RPS10P5Q9NQ39 176 aa6.32□□□□□ -1.4
SKP2-207ENST00000513263 A0A096LNJ9 63 aa6.31□□□□□ -1.4
SKP2-207ENST00000513263 C11orf86A6NJI1 115 aa6.31□□□□□ -1.4
SKP2-207ENST00000513263 HERV-K104P63124 156 aa6.31□□□□□ -1.4
SKP2-207ENST00000513263 LINC00337Q8N6G1 96 aa6.31□□□□□ -1.4
SKP2-207ENST00000513263 MAP1LC3CQ9BXW4 147 aa6.31□□□□□ -1.4
SKP2-207ENST00000513263 TRAPPC1Q9Y5R8 145 aa6.31□□□□□ -1.4
SKP2-207ENST00000513263 SPINK1P00995 79 aa6.3□□□□□ -1.4
SKP2-207ENST00000513263 S100A1P23297 94 aa6.3□□□□□ -1.4
SKP2-207ENST00000513263 CHTOPQ9Y3Y2 248 aaKnown RBP6.3□□□□□ -1.4
SKP2-207ENST00000513263 TRAV12-1A0A0B4J245 112 aa6.29□□□□□ -1.4
SKP2-207ENST00000513263 ETDCA0A1B0GVM5 59 aa6.29□□□□□ -1.4
SKP2-207ENST00000513263 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
SKP2-207ENST00000513263 MEIG1Q5JSS6 88 aa6.29□□□□□ -1.4
SKP2-207ENST00000513263 C3orf22Q8N5N4 141 aa6.29□□□□□ -1.4
SKP2-207ENST00000513263 CHCHD1Q96BP2 118 aaKnown RBP6.28□□□□□ -1.4
SKP2-207ENST00000513263 KCNQ1DNQ9H478 68 aa6.28□□□□□ -1.4
SKP2-207ENST00000513263 TMEM223A0PJW6 202 aa6.27□□□□□ -1.41
SKP2-207ENST00000513263 SPRR1AP35321 89 aa6.27□□□□□ -1.41
SKP2-207ENST00000513263 BOD1L2Q8IYS8 172 aa6.27□□□□□ -1.41
SKP2-207ENST00000513263 MYMXA0A1B0GTQ4 84 aa6.26□□□□□ -1.41
SKP2-207ENST00000513263 Q8NBF4 154 aa6.26□□□□□ -1.41
SKP2-207ENST00000513263 IFI27L1Q96BM0 104 aa6.26□□□□□ -1.41
SKP2-207ENST00000513263 A6NJY4 79 aa6.25□□□□□ -1.41
SKP2-207ENST00000513263 SEC61BP60468 96 aaKnown RBP6.25□□□□□ -1.41
SKP2-207ENST00000513263 PMCHL1Q16048 86 aa6.25□□□□□ -1.41
SKP2-207ENST00000513263 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
SKP2-207ENST00000513263 Q8NDZ9 215 aa6.25□□□□□ -1.41
SKP2-207ENST00000513263 URB1-AS1Q96HZ7 61 aa6.25□□□□□ -1.41
SKP2-207ENST00000513263 TRBV10-2A0A0K0K1G8 114 aa6.24□□□□□ -1.41
SKP2-207ENST00000513263 NCR3O14931 201 aa6.24□□□□□ -1.41
SKP2-207ENST00000513263 SMIM13P0DJ93 91 aa6.24□□□□□ -1.41
SKP2-207ENST00000513263 ASB16-AS1Q495Z4 193 aa6.24□□□□□ -1.41
SKP2-207ENST00000513263 MIR7-3HGQ8N6C7 128 aa6.24□□□□□ -1.41
SKP2-207ENST00000513263 DAND5Q8N907 189 aa6.24□□□□□ -1.41
SKP2-207ENST00000513263 MIEN1Q9BRT3 115 aa6.24□□□□□ -1.41
SKP2-207ENST00000513263 CBY1Q9Y3M2 126 aa6.24□□□□□ -1.41
SKP2-207ENST00000513263 A0A0U1RRA0 63 aa6.23□□□□□ -1.41
SKP2-207ENST00000513263 KRTAP13-3Q3SY46 172 aa6.23□□□□□ -1.41
SKP2-207ENST00000513263 SSBP3-AS1Q7Z2R9 100 aa6.23□□□□□ -1.41
SKP2-207ENST00000513263 KRTAP4-16G5E9R7 235 aaPredicted RBP6.22□□□□□ -1.41
SKP2-207ENST00000513263 SLC25A20O43772 301 aa6.22□□□□□ -1.41
SKP2-207ENST00000513263 LINC01547P58512 204 aaPredicted RBP6.22□□□□□ -1.41
SKP2-207ENST00000513263 JOSD1Q15040 202 aaPredicted RBP6.22□□□□□ -1.41
SKP2-207ENST00000513263 SMCR5Q8TEV8 140 aa6.22□□□□□ -1.41
SKP2-207ENST00000513263 TRBV10-3A0A0K0K1G6 114 aa6.21□□□□□ -1.42
SKP2-207ENST00000513263 HSBP1O75506 76 aa6.21□□□□□ -1.42
SKP2-207ENST00000513263 PLNP26678 52 aa6.21□□□□□ -1.42
SKP2-207ENST00000513263 NMUP48645 174 aa6.21□□□□□ -1.42
SKP2-207ENST00000513263 SPANXB1Q9NS25 103 aaPredicted RBP6.21□□□□□ -1.42
SKP2-207ENST00000513263 LOC107984156A0A0G2JMH3 177 aa6.2□□□□□ -1.42
SKP2-207ENST00000513263 DDTP30046 118 aa6.2□□□□□ -1.42
SKP2-207ENST00000513263 HERVK_113P61574 105 aa6.2□□□□□ -1.42
SKP2-207ENST00000513263 GAGE2AQ6NT46 116 aa6.2□□□□□ -1.42
SKP2-207ENST00000513263 Q6ZRX8 168 aa6.2□□□□□ -1.42
SKP2-207ENST00000513263 ARL17AQ8IVW1 177 aa6.2□□□□□ -1.42
SKP2-207ENST00000513263 C5orf52A6NGY3 159 aa6.19□□□□□ -1.42
SKP2-207ENST00000513263 B5MCH6 92 aa6.19□□□□□ -1.42
SKP2-207ENST00000513263 NDUFC2O95298 119 aa6.19□□□□□ -1.42
SKP2-207ENST00000513263 MOBPQ13875 183 aa6.19□□□□□ -1.42
SKP2-207ENST00000513263 IGLV9-49A0A0B4J1Y8 123 aa6.18□□□□□ -1.42
SKP2-207ENST00000513263 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
SKP2-207ENST00000513263 S100A7L2Q5SY68 101 aa6.18□□□□□ -1.42
SKP2-207ENST00000513263 LEPROTO15243 131 aa6.17□□□□□ -1.42
SKP2-207ENST00000513263 HINT1P49773 126 aaPredicted RBP6.17□□□□□ -1.42
SKP2-207ENST00000513263 SLC25A34Q6PIV7 304 aa6.17□□□□□ -1.42
SKP2-207ENST00000513263 Q8N377 158 aa6.17□□□□□ -1.42
SKP2-207ENST00000513263 LEPROTL1O95214 131 aa6.16□□□□□ -1.42
SKP2-207ENST00000513263 YPEL4Q96NS1 127 aa6.16□□□□□ -1.42
SKP2-207ENST00000513263 LIMD2Q9BT23 127 aa6.16□□□□□ -1.42
SKP2-207ENST00000513263 HSPB8Q9UJY1 196 aa6.16□□□□□ -1.42
SKP2-207ENST00000513263 TRAV23DV6A0A075B6W5 121 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms