RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 TRBV7-7A0A0K0K1E9 115 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 ELOF1P60002 83 aaKnown RBP2.87□□□□□ -1.95
VCAN-209ENST00000513016 EXPH5Q8NEV8 1989 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 A8MTW9 85 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 SNURFQ9Y675 71 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 MT-ATP8P03928 68 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 COX7CP15954 63 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 Q96NJ1 140 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 H3BPC8 53 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 CHTF8P0CG12 524 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 APLNQ9ULZ1 77 aa2.87□□□□□ -1.95
VCAN-209ENST00000513016 SMIM26A0A096LP01 95 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 ACYP2P14621 99 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 CXCL6P80162 114 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 ZNF861PO60384 105 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 CPAMD8Q8IZJ3 1885 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 DEFB116Q30KQ4 102 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 C9orf163Q8N9P6 203 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 C1orf64Q8NEQ6 169 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 ARHGAP32A7KAX9 2087 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 DSCAML1Q8TD84 2053 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 ZNF575Q86XF7 245 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 LINC00476Q8WZB0 136 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 Q8N3U1 123 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 URB1-AS1Q96HZ7 61 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 RBM12B-AS1Q9P1G2 102 aa2.86□□□□□ -1.95
VCAN-209ENST00000513016 LINC01546A6NGU7 62 aa2.85□□□□□ -1.95
VCAN-209ENST00000513016 CSNK1G2-AS1Q8NCQ2 148 aa2.85□□□□□ -1.95
VCAN-209ENST00000513016 KRTAP10-3P60369 221 aa2.85□□□□□ -1.95
VCAN-209ENST00000513016 MYO18BQ8IUG5 2567 aa2.85□□□□□ -1.95
VCAN-209ENST00000513016 ATG2AQ2TAZ0 1938 aa2.85□□□□□ -1.95
VCAN-209ENST00000513016 ST20-AS1Q8NBB2 130 aa2.85□□□□□ -1.95
VCAN-209ENST00000513016 LINC00528Q8N1L1 170 aa2.85□□□□□ -1.95
VCAN-209ENST00000513016 KRTAP1-3Q8IUG1 177 aa2.84□□□□□ -1.95
VCAN-209ENST00000513016 SMR3BP02814 79 aaPredicted RBP2.84□□□□□ -1.96
VCAN-209ENST00000513016 LINC00612Q8N6U2 182 aa2.84□□□□□ -1.96
VCAN-209ENST00000513016 PLA2G2DQ9UNK4 145 aa2.84□□□□□ -1.96
VCAN-209ENST00000513016 TLX1NBP0CAT3 122 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 CCDC179H3BU77 68 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 IGLV7-43P04211 117 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 IGLV1-50A0A075B6I6 118 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 KRTAP1-1Q07627 177 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 TRBV7-4A0A0J9YYF1 115 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 PRR34Q9NV39 138 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 LOC101927531A0A1B0GV80 90 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 A0A096LNJ9 63 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 TRAV22A0A0B4J277 110 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 SOSTDC1Q6X4U4 206 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 PSORS1C2Q9UIG4 136 aa2.83□□□□□ -1.96
VCAN-209ENST00000513016 HCFC1P51610 2035 aa2.82□□□□□ -1.96
VCAN-209ENST00000513016 KCNQ1DNQ9H478 68 aa2.82□□□□□ -1.96
VCAN-209ENST00000513016 MRPL34Q9BQ48 92 aaKnown RBP2.82□□□□□ -1.96
VCAN-209ENST00000513016 A0A1B0GU69 56 aa2.82□□□□□ -1.96
VCAN-209ENST00000513016 CNBPP62633 177 aaKnown RBP2.82□□□□□ -1.96
VCAN-209ENST00000513016 CASC10Q5T4H9 136 aa2.81□□□□□ -1.96
VCAN-209ENST00000513016 JMJD1CQ15652 2540 aa2.81□□□□□ -1.96
VCAN-209ENST00000513016 PTPRBP23467 1997 aa2.81□□□□□ -1.96
VCAN-209ENST00000513016 LRRK2Q5S007 2527 aa2.81□□□□□ -1.96
VCAN-209ENST00000513016 CHD8Q9HCK8 2581 aa2.81□□□□□ -1.96
VCAN-209ENST00000513016 LOC110117498A0A087WWA1 95 aa2.81□□□□□ -1.96
VCAN-209ENST00000513016 TMEM254Q8TBM7 123 aa2.81□□□□□ -1.96
VCAN-209ENST00000513016 TANC2Q9HCD6 1990 aa2.81□□□□□ -1.96
VCAN-209ENST00000513016 EML5Q05BV3 1969 aa2.81□□□□□ -1.96
VCAN-209ENST00000513016 A8MWP4 228 aa2.81□□□□□ -1.96
VCAN-209ENST00000513016 PSPHP1O15172 72 aa2.81□□□□□ -1.96
VCAN-209ENST00000513016 IGLV5-37A0A075B6J1 123 aa2.8□□□□□ -1.96
VCAN-209ENST00000513016 IGLV6-57P01721 117 aa2.8□□□□□ -1.96
VCAN-209ENST00000513016 LINC00846Q9NV44 126 aa2.8□□□□□ -1.96
VCAN-209ENST00000513016 SMIM29Q86T20 159 aa2.8□□□□□ -1.96
VCAN-209ENST00000513016 PLXNB1O43157 2135 aa2.8□□□□□ -1.96
VCAN-209ENST00000513016 LINC00310P59036 64 aa2.8□□□□□ -1.96
VCAN-209ENST00000513016 DOPEY1Q5JWR5 2465 aa2.79□□□□□ -1.96
VCAN-209ENST00000513016 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
VCAN-209ENST00000513016 Q9UF83 564 aa2.79□□□□□ -1.96
VCAN-209ENST00000513016 C15orf56Q8N910 161 aa2.79□□□□□ -1.96
VCAN-209ENST00000513016 ZFYVE26Q68DK2 2539 aa2.79□□□□□ -1.96
VCAN-209ENST00000513016 ZNF462Q96JM2 2506 aa2.79□□□□□ -1.96
VCAN-209ENST00000513016 WIPF1O43516 503 aa2.79□□□□□ -1.96
VCAN-209ENST00000513016 TLN1Q9Y490 2541 aaKnown RBP2.79□□□□□ -1.96
VCAN-209ENST00000513016 A0A087WVE0 104 aa2.79□□□□□ -1.96
VCAN-209ENST00000513016 Q6ZQT0 140 aa2.78□□□□□ -1.96
VCAN-209ENST00000513016 FAM168BA1KXE4 195 aa2.78□□□□□ -1.96
VCAN-209ENST00000513016 TNP2Q05952 138 aa2.78□□□□□ -1.96
VCAN-209ENST00000513016 AGRNO00468 2067 aa2.78□□□□□ -1.96
VCAN-209ENST00000513016 COL27A1Q8IZC6 1860 aaPredicted RBP2.78□□□□□ -1.96
VCAN-209ENST00000513016 GIG44P09565 113 aaPredicted RBP2.78□□□□□ -1.96
VCAN-209ENST00000513016 ABCA12Q86UK0 2595 aa2.78□□□□□ -1.96
VCAN-209ENST00000513016 Q6ZSA8 131 aa2.78□□□□□ -1.96
VCAN-209ENST00000513016 IGLV7-46A0A075B6I9 117 aa2.77□□□□□ -1.97
VCAN-209ENST00000513016 LCE6AA0A183 80 aa2.77□□□□□ -1.97
VCAN-209ENST00000513016 PRO0628Q9UI54 55 aa2.77□□□□□ -1.97
VCAN-209ENST00000513016 SPRR4Q96PI1 79 aa2.77□□□□□ -1.97
VCAN-209ENST00000513016 PIEZO2Q9H5I5 2752 aa2.77□□□□□ -1.97
VCAN-209ENST00000513016 C9orf92A6NGG3 77 aa2.77□□□□□ -1.97
VCAN-209ENST00000513016 C8orf17Q9NRJ1 99 aa2.77□□□□□ -1.97
VCAN-209ENST00000513016 A0A1B0GVX0 72 aa2.77□□□□□ -1.97
VCAN-209ENST00000513016 CD164Q04900 197 aa2.77□□□□□ -1.97
VCAN-209ENST00000513016 DSCR10P59022 87 aa2.77□□□□□ -1.97
VCAN-209ENST00000513016 FAM229BQ4G0N7 80 aa2.76□□□□□ -1.97
VCAN-209ENST00000513016 OBSCN-AS1Q96MR7 158 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms