RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 K7EQZ3 153 aa6.08□□□□□ -1.44
VCAN-208ENST00000512590 VPREB1P12018 145 aa6.08□□□□□ -1.44
VCAN-208ENST00000512590 TTC28Q96AY4 2481 aa6.08□□□□□ -1.44
VCAN-208ENST00000512590 ABCA2Q9BZC7 2435 aa6.08□□□□□ -1.44
VCAN-208ENST00000512590 H3BPC8 53 aa6.07□□□□□ -1.44
VCAN-208ENST00000512590 Q6ZRX8 168 aa6.07□□□□□ -1.44
VCAN-208ENST00000512590 TECTAO75443 2155 aa6.07□□□□□ -1.44
VCAN-208ENST00000512590 ZNF861PO60384 105 aa6.07□□□□□ -1.44
VCAN-208ENST00000512590 ZNF580Q9UK33 172 aa6.07□□□□□ -1.44
VCAN-208ENST00000512590 HELZP42694 1942 aaKnown RBP6.07□□□□□ -1.44
VCAN-208ENST00000512590 C8orf17Q9NRJ1 99 aa6.06□□□□□ -1.44
VCAN-208ENST00000512590 CDC42SE1Q9NRR8 79 aa6.06□□□□□ -1.44
VCAN-208ENST00000512590 EXPH5Q8NEV8 1989 aa6.05□□□□□ -1.44
VCAN-208ENST00000512590 TANC2Q9HCD6 1990 aa6.04□□□□□ -1.44
VCAN-208ENST00000512590 LINC00846Q9NV44 126 aa6.04□□□□□ -1.44
VCAN-208ENST00000512590 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
VCAN-208ENST00000512590 C11orf72Q8NBR9 251 aa6.04□□□□□ -1.44
VCAN-208ENST00000512590 CEP350Q5VT06 3117 aa6.04□□□□□ -1.44
VCAN-208ENST00000512590 UQCR11O14957 56 aa6.04□□□□□ -1.44
VCAN-208ENST00000512590 PLXNA2O75051 1894 aa6.04□□□□□ -1.44
VCAN-208ENST00000512590 LITAFQ99732 161 aa6.03□□□□□ -1.44
VCAN-208ENST00000512590 SPG11Q96JI7 2443 aa6.03□□□□□ -1.44
VCAN-208ENST00000512590 IGIPA6NJ69 53 aa6.03□□□□□ -1.44
VCAN-208ENST00000512590 IGLV7-43P04211 117 aa6.03□□□□□ -1.44
VCAN-208ENST00000512590 C10orf142B7Z368 130 aa6.03□□□□□ -1.44
VCAN-208ENST00000512590 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
VCAN-208ENST00000512590 MED12LQ86YW9 2145 aa6.02□□□□□ -1.45
VCAN-208ENST00000512590 GVQW2A0A096LPI5 108 aaPredicted RBP6.02□□□□□ -1.45
VCAN-208ENST00000512590 CUL9Q8IWT3 2517 aa6.01□□□□□ -1.45
VCAN-208ENST00000512590 A8MWP4 228 aa6.01□□□□□ -1.45
VCAN-208ENST00000512590 KIF26AQ9ULI4 1882 aaPredicted RBP6.01□□□□□ -1.45
VCAN-208ENST00000512590 ELOF1P60002 83 aaKnown RBP6.01□□□□□ -1.45
VCAN-208ENST00000512590 CSPG4Q6UVK1 2322 aa6.01□□□□□ -1.45
VCAN-208ENST00000512590 ANAPC1Q9H1A4 1944 aa6.01□□□□□ -1.45
VCAN-208ENST00000512590 A0A1B0GW54 56 aa6.01□□□□□ -1.45
VCAN-208ENST00000512590 A0A1W2PPR1 153 aa6□□□□□ -1.45
VCAN-208ENST00000512590 CCDC179H3BU77 68 aa5.99□□□□□ -1.45
VCAN-208ENST00000512590 AMELXQ99217 191 aa5.99□□□□□ -1.45
VCAN-208ENST00000512590 Q8NAQ8 132 aa5.99□□□□□ -1.45
VCAN-208ENST00000512590 FAM168BA1KXE4 195 aa5.99□□□□□ -1.45
VCAN-208ENST00000512590 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
VCAN-208ENST00000512590 DNAH12Q6ZR08 3092 aa5.98□□□□□ -1.45
VCAN-208ENST00000512590 ACACBO00763 2458 aa5.98□□□□□ -1.45
VCAN-208ENST00000512590 KRTAP10-11P60412 298 aa5.98□□□□□ -1.45
VCAN-208ENST00000512590 ADAMTSL4-AS1Q5T5F5 129 aa5.97□□□□□ -1.45
VCAN-208ENST00000512590 PLA2G2DQ9UNK4 145 aa5.97□□□□□ -1.45
VCAN-208ENST00000512590 CASC10Q5T4H9 136 aa5.97□□□□□ -1.45
VCAN-208ENST00000512590 Q8N1X5 172 aa5.97□□□□□ -1.45
VCAN-208ENST00000512590 GAS8-AS1O95177 125 aa5.97□□□□□ -1.45
VCAN-208ENST00000512590 A8MUN3 132 aa5.96□□□□□ -1.45
VCAN-208ENST00000512590 ANAPC11Q9NYG5 84 aa5.96□□□□□ -1.46
VCAN-208ENST00000512590 ARHGAP21Q5T5U3 1957 aa5.96□□□□□ -1.46
VCAN-208ENST00000512590 LAMA3Q16787 3333 aa5.95□□□□□ -1.46
VCAN-208ENST00000512590 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
VCAN-208ENST00000512590 A0A1B0GVX0 72 aa5.94□□□□□ -1.46
VCAN-208ENST00000512590 RAI1Q7Z5J4 1906 aaPredicted RBP5.94□□□□□ -1.46
VCAN-208ENST00000512590 NOTCH4Q99466 2003 aa5.94□□□□□ -1.46
VCAN-208ENST00000512590 Q6ZPA2 131 aa5.93□□□□□ -1.46
VCAN-208ENST00000512590 PRR26Q8N8Z3 221 aa5.93□□□□□ -1.46
VCAN-208ENST00000512590 NAV3Q8IVL0 2385 aa5.93□□□□□ -1.46
VCAN-208ENST00000512590 COL5A1P20908 1838 aaPredicted RBP5.93□□□□□ -1.46
VCAN-208ENST00000512590 ATG2AQ2TAZ0 1938 aa5.93□□□□□ -1.46
VCAN-208ENST00000512590 COL4A4P53420 1690 aaPredicted RBP5.93□□□□□ -1.46
VCAN-208ENST00000512590 TRBV7-4A0A0J9YYF1 115 aa5.92□□□□□ -1.46
VCAN-208ENST00000512590 TSPEAR-AS2P59090 65 aa5.92□□□□□ -1.46
VCAN-208ENST00000512590 ADAMTS20P59510 1910 aa5.92□□□□□ -1.46
VCAN-208ENST00000512590 COA5Q86WW8 74 aa5.92□□□□□ -1.46
VCAN-208ENST00000512590 BRCA2P51587 3418 aa5.92□□□□□ -1.46
VCAN-208ENST00000512590 S4R3F8 94 aa5.91□□□□□ -1.46
VCAN-208ENST00000512590 PTPRSQ13332 1948 aa5.91□□□□□ -1.46
VCAN-208ENST00000512590 PLXNB1O43157 2135 aa5.91□□□□□ -1.46
VCAN-208ENST00000512590 PCNX3Q9H6A9 2034 aa5.9□□□□□ -1.46
VCAN-208ENST00000512590 DENND4CQ5VZ89 1909 aa5.9□□□□□ -1.47
VCAN-208ENST00000512590 IGFL1Q6UW32 110 aa5.9□□□□□ -1.47
VCAN-208ENST00000512590 FAM104AQ969W3 186 aa5.9□□□□□ -1.47
VCAN-208ENST00000512590 OXTP01178 125 aa5.9□□□□□ -1.47
VCAN-208ENST00000512590 TNP2Q05952 138 aa5.89□□□□□ -1.47
VCAN-208ENST00000512590 CACNA1AO00555 2505 aa5.89□□□□□ -1.47
VCAN-208ENST00000512590 ZNF106Q9H2Y7 1883 aaKnown RBP5.89□□□□□ -1.47
VCAN-208ENST00000512590 CNFNQ9BYD5 112 aa5.89□□□□□ -1.47
VCAN-208ENST00000512590 PCDH15Q96QU1 1955 aa5.89□□□□□ -1.47
VCAN-208ENST00000512590 LINC00612Q8N6U2 182 aa5.88□□□□□ -1.47
VCAN-208ENST00000512590 KTN1-AS1Q86SY8 53 aa5.88□□□□□ -1.47
VCAN-208ENST00000512590 R4GN34 69 aa5.88□□□□□ -1.47
VCAN-208ENST00000512590 BDP1A6H8Y1 2624 aa5.88□□□□□ -1.47
VCAN-208ENST00000512590 AGRNO00468 2067 aa5.88□□□□□ -1.47
VCAN-208ENST00000512590 ERC2-IT1O76042 136 aa5.88□□□□□ -1.47
VCAN-208ENST00000512590 PLXNB3Q9ULL4 1909 aa5.88□□□□□ -1.47
VCAN-208ENST00000512590 LAMA2P24043 3122 aaKnown RBP5.86□□□□□ -1.47
VCAN-208ENST00000512590 C15orf56Q8N910 161 aa5.86□□□□□ -1.47
VCAN-208ENST00000512590 C2orf16Q68DN1 1984 aa5.86□□□□□ -1.47
VCAN-208ENST00000512590 NUP210LQ5VU65 1888 aa5.86□□□□□ -1.47
VCAN-208ENST00000512590 H1FX-AS1Q4G0G2 97 aa5.86□□□□□ -1.47
VCAN-208ENST00000512590 NAV2Q8IVL1 2488 aa5.86□□□□□ -1.47
VCAN-208ENST00000512590 LTBP2Q14767 1821 aa5.86□□□□□ -1.47
VCAN-208ENST00000512590 COL4A3Q01955 1670 aa5.86□□□□□ -1.47
VCAN-208ENST00000512590 C19orf73Q9NVV2 129 aa5.85□□□□□ -1.47
VCAN-208ENST00000512590 MKI67P46013 3256 aaKnown RBP5.84□□□□□ -1.47
VCAN-208ENST00000512590 LCA10Q71F78 164 aa5.84□□□□□ -1.47
VCAN-208ENST00000512590 ALPK3Q96L96 1907 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms