RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 BAGE3Q86Y29 109 aa8.54□□□□□ -1.04
CCHCR1-229ENST00000512418 RETNLBQ9BQ08 111 aa8.54□□□□□ -1.04
CCHCR1-229ENST00000512418 CTAG1AP78358 180 aa8.53□□□□□ -1.04
CCHCR1-229ENST00000512418 Q8NDZ9 215 aa8.53□□□□□ -1.04
CCHCR1-229ENST00000512418 CBLN2Q8IUK8 224 aa8.52□□□□□ -1.05
CCHCR1-229ENST00000512418 PLEKHB2Q96CS7 222 aa8.52□□□□□ -1.05
CCHCR1-229ENST00000512418 LINC00158P58513 81 aa8.5□□□□□ -1.05
CCHCR1-229ENST00000512418 TPRXLQ17RH7 258 aa8.5□□□□□ -1.05
CCHCR1-229ENST00000512418 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
CCHCR1-229ENST00000512418 CHTOPQ9Y3Y2 248 aaKnown RBP8.5□□□□□ -1.05
CCHCR1-229ENST00000512418 CDIP1Q9H305 208 aa8.48□□□□□ -1.05
CCHCR1-229ENST00000512418 IGLV7-46A0A075B6I9 117 aa8.47□□□□□ -1.05
CCHCR1-229ENST00000512418 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
CCHCR1-229ENST00000512418 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
CCHCR1-229ENST00000512418 TRAV12-1A0A0B4J245 112 aa8.46□□□□□ -1.06
CCHCR1-229ENST00000512418 A0A0U1RRA0 63 aa8.46□□□□□ -1.06
CCHCR1-229ENST00000512418 SPAG11AQ6PDA7 123 aa8.46□□□□□ -1.06
CCHCR1-229ENST00000512418 SPRR4Q96PI1 79 aa8.46□□□□□ -1.06
CCHCR1-229ENST00000512418 FAT4Q6V0I7 4981 aa8.46□□□□□ -1.06
CCHCR1-229ENST00000512418 MUC17Q685J3 4493 aa8.45□□□□□ -1.06
CCHCR1-229ENST00000512418 APOC3P02656 99 aa8.45□□□□□ -1.06
CCHCR1-229ENST00000512418 IFI27L1Q96BM0 104 aa8.45□□□□□ -1.06
CCHCR1-229ENST00000512418 CHCHD1Q96BP2 118 aaKnown RBP8.45□□□□□ -1.06
CCHCR1-229ENST00000512418 ZNF706Q9Y5V0 76 aaPredicted RBP8.45□□□□□ -1.06
CCHCR1-229ENST00000512418 PRYO14603 147 aa8.44□□□□□ -1.06
CCHCR1-229ENST00000512418 ATP6V1G1O75348 118 aa8.44□□□□□ -1.06
CCHCR1-229ENST00000512418 SNAPINO95295 136 aa8.44□□□□□ -1.06
CCHCR1-229ENST00000512418 SMIM13P0DJ93 91 aa8.44□□□□□ -1.06
CCHCR1-229ENST00000512418 SVBPQ8N300 66 aa8.44□□□□□ -1.06
CCHCR1-229ENST00000512418 NDUFA5Q16718 116 aa8.43□□□□□ -1.06
CCHCR1-229ENST00000512418 MEIG1Q5JSS6 88 aa8.43□□□□□ -1.06
CCHCR1-229ENST00000512418 BOD1L2Q8IYS8 172 aa8.43□□□□□ -1.06
CCHCR1-229ENST00000512418 SPRR1AP35321 89 aa8.42□□□□□ -1.06
CCHCR1-229ENST00000512418 HERV-K104P63124 156 aa8.42□□□□□ -1.06
CCHCR1-229ENST00000512418 MIR7-3HGQ8N6C7 128 aa8.42□□□□□ -1.06
CCHCR1-229ENST00000512418 LINC00337Q8N6G1 96 aa8.42□□□□□ -1.06
CCHCR1-229ENST00000512418 PPDPFQ9H3Y8 114 aa8.42□□□□□ -1.06
CCHCR1-229ENST00000512418 LINC00587B1AMM8 73 aa8.41□□□□□ -1.06
CCHCR1-229ENST00000512418 NCR3O14931 201 aa8.41□□□□□ -1.06
CCHCR1-229ENST00000512418 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
CCHCR1-229ENST00000512418 KCNQ1DNQ9H478 68 aa8.41□□□□□ -1.06
CCHCR1-229ENST00000512418 C4orf48Q5BLP8 95 aa8.4□□□□□ -1.06
CCHCR1-229ENST00000512418 FP248Q71RG6 208 aaPredicted RBP8.4□□□□□ -1.06
CCHCR1-229ENST00000512418 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
CCHCR1-229ENST00000512418 YPEL4Q96NS1 127 aa8.39□□□□□ -1.07
CCHCR1-229ENST00000512418 NDUFA12Q9UI09 145 aa8.39□□□□□ -1.07
CCHCR1-229ENST00000512418 MYMXA0A1B0GTQ4 84 aa8.38□□□□□ -1.07
CCHCR1-229ENST00000512418 KRTAP4-16G5E9R7 235 aaPredicted RBP8.38□□□□□ -1.07
CCHCR1-229ENST00000512418 HSBP1O75506 76 aa8.38□□□□□ -1.07
CCHCR1-229ENST00000512418 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
CCHCR1-229ENST00000512418 TRBV10-3A0A0K0K1G6 114 aa8.37□□□□□ -1.07
CCHCR1-229ENST00000512418 S100A12P80511 92 aa8.37□□□□□ -1.07
CCHCR1-229ENST00000512418 Q8NBF4 154 aa8.37□□□□□ -1.07
CCHCR1-229ENST00000512418 SMCR5Q8TEV8 140 aa8.37□□□□□ -1.07
CCHCR1-229ENST00000512418 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
CCHCR1-229ENST00000512418 DAND5Q8N907 189 aa8.36□□□□□ -1.07
CCHCR1-229ENST00000512418 KRTAP9-2Q9BYQ4 174 aa8.36□□□□□ -1.07
CCHCR1-229ENST00000512418 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
CCHCR1-229ENST00000512418 H0Y8G0 127 aa8.34□□□□□ -1.07
CCHCR1-229ENST00000512418 SPINK1P00995 79 aa8.34□□□□□ -1.07
CCHCR1-229ENST00000512418 TSPEAR-AS2P59090 65 aa8.33□□□□□ -1.08
CCHCR1-229ENST00000512418 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 TRBV10-2A0A0K0K1G8 114 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 B5MCH6 92 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 PLNP26678 52 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 KRTAP13-3Q3SY46 172 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 LEPROTO15243 131 aa8.31□□□□□ -1.08
CCHCR1-229ENST00000512418 LEPROTL1O95214 131 aa8.31□□□□□ -1.08
CCHCR1-229ENST00000512418 DDTP30046 118 aa8.31□□□□□ -1.08
CCHCR1-229ENST00000512418 GAGE2AQ6NT46 116 aa8.31□□□□□ -1.08
CCHCR1-229ENST00000512418 J3QQQ9 107 aa8.3□□□□□ -1.08
CCHCR1-229ENST00000512418 MOBPQ13875 183 aa8.3□□□□□ -1.08
CCHCR1-229ENST00000512418 MIEN1Q9BRT3 115 aa8.3□□□□□ -1.08
CCHCR1-229ENST00000512418 SPANXB1Q9NS25 103 aaPredicted RBP8.3□□□□□ -1.08
CCHCR1-229ENST00000512418 IGLV9-49A0A0B4J1Y8 123 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 ERC2-IT1O76042 136 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 TRGC2P03986 189 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 NMUP48645 174 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 HERVK_113P61574 105 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 Q6ZRX8 168 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 SERF1AO75920 110 aa8.28□□□□□ -1.08
CCHCR1-229ENST00000512418 LINC00310P59036 64 aa8.28□□□□□ -1.08
CCHCR1-229ENST00000512418 SSBP3-AS1Q7Z2R9 100 aa8.28□□□□□ -1.08
CCHCR1-229ENST00000512418 Q9BRP9 147 aa8.28□□□□□ -1.08
CCHCR1-229ENST00000512418 HSPB8Q9UJY1 196 aa8.28□□□□□ -1.08
CCHCR1-229ENST00000512418 DPM2O94777 84 aa8.27□□□□□ -1.09
CCHCR1-229ENST00000512418 NDUFC2O95298 119 aa8.27□□□□□ -1.09
CCHCR1-229ENST00000512418 LGALS3P17931 250 aaKnown RBP8.27□□□□□ -1.09
CCHCR1-229ENST00000512418 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.09
CCHCR1-229ENST00000512418 IGLV6-57P01721 117 aa8.26□□□□□ -1.09
CCHCR1-229ENST00000512418 S100A7L2Q5SY68 101 aa8.26□□□□□ -1.09
CCHCR1-229ENST00000512418 IGKCP01834 107 aa8.25□□□□□ -1.09
CCHCR1-229ENST00000512418 Q8N377 158 aa8.25□□□□□ -1.09
CCHCR1-229ENST00000512418 TRAV23DV6A0A075B6W5 121 aa8.24□□□□□ -1.09
CCHCR1-229ENST00000512418 FABP4P15090 132 aa8.24□□□□□ -1.09
CCHCR1-229ENST00000512418 JOSD1Q15040 202 aaPredicted RBP8.24□□□□□ -1.09
CCHCR1-229ENST00000512418 PMCHL2Q9BQD1 86 aa8.24□□□□□ -1.09
CCHCR1-229ENST00000512418 SLC25A20O43772 301 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms