RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 GIG44P09565 113 aaPredicted RBP9.07□□□□□ -0.96
PCDHA4-202ENST00000512229 H3BNG1 76 aa9.06□□□□□ -0.96
PCDHA4-202ENST00000512229 DHRS4-AS1Q9P1J3 65 aa9.06□□□□□ -0.96
PCDHA4-202ENST00000512229 KRTAP10-3P60369 221 aa9.06□□□□□ -0.96
PCDHA4-202ENST00000512229 CCKP06307 115 aa9.05□□□□□ -0.96
PCDHA4-202ENST00000512229 LINC00337Q8N6G1 96 aa9.05□□□□□ -0.96
PCDHA4-202ENST00000512229 BPY2O14599 106 aa9.05□□□□□ -0.96
PCDHA4-202ENST00000512229 LINC01556Q5JQF7 62 aa9.05□□□□□ -0.96
PCDHA4-202ENST00000512229 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.05□□□□□ -0.96
PCDHA4-202ENST00000512229 Q6ZRU5 148 aa9.04□□□□□ -0.96
PCDHA4-202ENST00000512229 SETXQ7Z333 2677 aaKnown RBP9.04□□□□□ -0.96
PCDHA4-202ENST00000512229 F8WDY8 70 aa9.04□□□□□ -0.96
PCDHA4-202ENST00000512229 SDIM1Q6ZPB5 146 aa9.04□□□□□ -0.96
PCDHA4-202ENST00000512229 UBR5O95071 2799 aaPredicted RBP9.03□□□□□ -0.96
PCDHA4-202ENST00000512229 NHLRC4P0CG21 123 aaPredicted RBP9.03□□□□□ -0.96
PCDHA4-202ENST00000512229 Q8N814 137 aa9.03□□□□□ -0.96
PCDHA4-202ENST00000512229 LINC00474Q9P2X8 69 aa9.02□□□□□ -0.97
PCDHA4-202ENST00000512229 ZANQ9Y493 2812 aa9.02□□□□□ -0.97
PCDHA4-202ENST00000512229 A0A087WYN8 130 aa9.02□□□□□ -0.97
PCDHA4-202ENST00000512229 Q8N3U1 123 aa9.01□□□□□ -0.97
PCDHA4-202ENST00000512229 NOTCH1P46531 2555 aa9.01□□□□□ -0.97
PCDHA4-202ENST00000512229 NDUFS5O43920 106 aa9.01□□□□□ -0.97
PCDHA4-202ENST00000512229 UPK3BQ9BT76 320 aa9.01□□□□□ -0.97
PCDHA4-202ENST00000512229 UTP20O75691 2785 aaKnown RBP9.01□□□□□ -0.97
PCDHA4-202ENST00000512229 CR1P17927 2039 aa9□□□□□ -0.97
PCDHA4-202ENST00000512229 PLAC8L1A1L4L8 177 aa9□□□□□ -0.97
PCDHA4-202ENST00000512229 M0QXV9 152 aa9□□□□□ -0.97
PCDHA4-202ENST00000512229 ATP5EP2Q5VTU8 51 aa9□□□□□ -0.97
PCDHA4-202ENST00000512229 ZNF575Q86XF7 245 aa9□□□□□ -0.97
PCDHA4-202ENST00000512229 NDUFV3P56181 108 aaKnown RBP8.99□□□□□ -0.97
PCDHA4-202ENST00000512229 C4orf48Q5BLP8 95 aa8.99□□□□□ -0.97
PCDHA4-202ENST00000512229 XGP55808 180 aa8.99□□□□□ -0.97
PCDHA4-202ENST00000512229 SOSTDC1Q6X4U4 206 aa8.99□□□□□ -0.97
PCDHA4-202ENST00000512229 ITPR2Q14571 2701 aa8.98□□□□□ -0.97
PCDHA4-202ENST00000512229 PPDPFQ9H3Y8 114 aa8.98□□□□□ -0.97
PCDHA4-202ENST00000512229 SCXQ7RTU7 201 aa8.98□□□□□ -0.97
PCDHA4-202ENST00000512229 C3orf84H3BNL1 204 aa8.98□□□□□ -0.97
PCDHA4-202ENST00000512229 ENHOQ6UWT2 76 aa8.98□□□□□ -0.97
PCDHA4-202ENST00000512229 FAM240AA0A1B0GVK7 77 aa8.97□□□□□ -0.97
PCDHA4-202ENST00000512229 SMIM20Q8N5G0 67 aa8.97□□□□□ -0.97
PCDHA4-202ENST00000512229 H0Y9J4 135 aa8.96□□□□□ -0.97
PCDHA4-202ENST00000512229 C7orf33Q8WU49 177 aa8.96□□□□□ -0.97
PCDHA4-202ENST00000512229 C10orf25Q5T742 122 aa8.96□□□□□ -0.98
PCDHA4-202ENST00000512229 IMUPQ9GZP8 106 aa8.96□□□□□ -0.98
PCDHA4-202ENST00000512229 NBEAL1Q6ZS30 2694 aa8.95□□□□□ -0.98
PCDHA4-202ENST00000512229 C6orf48Q9UBA6 75 aa8.95□□□□□ -0.98
PCDHA4-202ENST00000512229 LRCOL1A6NCL2 159 aa8.94□□□□□ -0.98
PCDHA4-202ENST00000512229 KRTAP10-11P60412 298 aa8.94□□□□□ -0.98
PCDHA4-202ENST00000512229 MP68P56378 58 aa8.94□□□□□ -0.98
PCDHA4-202ENST00000512229 LINC00575Q6W349 94 aa8.94□□□□□ -0.98
PCDHA4-202ENST00000512229 LINC00612Q8N6U2 182 aa8.94□□□□□ -0.98
PCDHA4-202ENST00000512229 MRPL55Q7Z7F7 128 aaKnown RBP8.93□□□□□ -0.98
PCDHA4-202ENST00000512229 REG3GQ6UW15 175 aa8.93□□□□□ -0.98
PCDHA4-202ENST00000512229 LITAFQ99732 161 aa8.92□□□□□ -0.98
PCDHA4-202ENST00000512229 DCHS2Q6V1P9 2916 aa8.91□□□□□ -0.98
PCDHA4-202ENST00000512229 LINC00588Q9Y4M8 146 aa8.91□□□□□ -0.98
PCDHA4-202ENST00000512229 MDFIQ99750 246 aa8.9□□□□□ -0.98
PCDHA4-202ENST00000512229 BAHCC1Q9P281 2608 aa8.9□□□□□ -0.98
PCDHA4-202ENST00000512229 FAM19A3Q7Z5A8 133 aa8.89□□□□□ -0.99
PCDHA4-202ENST00000512229 SS18L2Q9UHA2 77 aa8.89□□□□□ -0.99
PCDHA4-202ENST00000512229 ZNF706Q9Y5V0 76 aaPredicted RBP8.89□□□□□ -0.99
PCDHA4-202ENST00000512229 K7EIL1 84 aa8.89□□□□□ -0.99
PCDHA4-202ENST00000512229 SMCPP49901 116 aaPredicted RBP8.89□□□□□ -0.99
PCDHA4-202ENST00000512229 PRYO14603 147 aa8.88□□□□□ -0.99
PCDHA4-202ENST00000512229 C1orf134Q5TEV5 83 aa8.88□□□□□ -0.99
PCDHA4-202ENST00000512229 C22orf24Q9Y442 160 aa8.88□□□□□ -0.99
PCDHA4-202ENST00000512229 UQCRQO14949 82 aa8.88□□□□□ -0.99
PCDHA4-202ENST00000512229 C20orf197Q8N268 126 aa8.88□□□□□ -0.99
PCDHA4-202ENST00000512229 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
PCDHA4-202ENST00000512229 PRO0461Q9UI25 63 aa8.87□□□□□ -0.99
PCDHA4-202ENST00000512229 NBEAL2Q6ZNJ1 2754 aa8.87□□□□□ -0.99
PCDHA4-202ENST00000512229 IGLV5-52A0A0A0MRZ9 124 aa8.87□□□□□ -0.99
PCDHA4-202ENST00000512229 Q6JHZ5 121 aa8.87□□□□□ -0.99
PCDHA4-202ENST00000512229 DNAH10OSP0CZ25 163 aa8.87□□□□□ -0.99
PCDHA4-202ENST00000512229 SPATA3Q8NHX4 192 aa8.86□□□□□ -0.99
PCDHA4-202ENST00000512229 SMG1Q96Q15 3661 aaKnown RBP8.86□□□□□ -0.99
PCDHA4-202ENST00000512229 FAM218AQ96MZ4 157 aa8.85□□□□□ -0.99
PCDHA4-202ENST00000512229 NF1P21359 2839 aa8.85□□□□□ -0.99
PCDHA4-202ENST00000512229 CELSR2Q9HCU4 2923 aa8.85□□□□□ -0.99
PCDHA4-202ENST00000512229 IGLV9-49A0A0B4J1Y8 123 aa8.84□□□□□ -0.99
PCDHA4-202ENST00000512229 PRR34Q9NV39 138 aa8.84□□□□□ -0.99
PCDHA4-202ENST00000512229 EIF4EBP3O60516 100 aaPredicted RBP8.84□□□□□ -0.99
PCDHA4-202ENST00000512229 Q6Q795 121 aa8.84□□□□□ -0.99
PCDHA4-202ENST00000512229 GVQW2A0A096LPI5 108 aaPredicted RBP8.83□□□□□ -1
PCDHA4-202ENST00000512229 LINC00167Q96N53 147 aa8.83□□□□□ -1
PCDHA4-202ENST00000512229 PRLHP81277 87 aa8.82□□□□□ -1
PCDHA4-202ENST00000512229 SERP2Q8N6R1 65 aa8.81□□□□□ -1
PCDHA4-202ENST00000512229 LINC00846Q9NV44 126 aa8.81□□□□□ -1
PCDHA4-202ENST00000512229 KIAA0087Q14695 138 aa8.81□□□□□ -1
PCDHA4-202ENST00000512229 C3orf22Q8N5N4 141 aa8.8□□□□□ -1
PCDHA4-202ENST00000512229 NBDYA0A0U1RRE5 68 aa8.8□□□□□ -1
PCDHA4-202ENST00000512229 SPINK6Q6UWN8 80 aa8.8□□□□□ -1
PCDHA4-202ENST00000512229 HRCT1Q6UXD1 115 aa8.8□□□□□ -1
PCDHA4-202ENST00000512229 CDIP1Q9H305 208 aa8.79□□□□□ -1
PCDHA4-202ENST00000512229 A0A087WVE0 104 aa8.78□□□□□ -1
PCDHA4-202ENST00000512229 TMEM258P61165 79 aa8.78□□□□□ -1
PCDHA4-202ENST00000512229 WFDC13Q8IUB5 93 aa8.78□□□□□ -1
PCDHA4-202ENST00000512229 Q9BRP9 147 aa8.78□□□□□ -1
PCDHA4-202ENST00000512229 Q6ZRP5 223 aa8.78□□□□□ -1
PCDHA4-202ENST00000512229 TM2D3Q9BRN9 247 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms