RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 SNHG12Q9BXW3 62 aa5.19□□□□□ -1.58
SMAD1-209ENST00000511125 PKHD1P08F94 4074 aa5.19□□□□□ -1.58
SMAD1-209ENST00000511125 A6NDN8 102 aa5.19□□□□□ -1.58
SMAD1-209ENST00000511125 BVES-AS1Q5T3Y7 98 aa5.19□□□□□ -1.58
SMAD1-209ENST00000511125 RPL37AP8A6NKH3 93 aa5.18□□□□□ -1.58
SMAD1-209ENST00000511125 NDUFC2-KCTD14E9PQ53 114 aa5.18□□□□□ -1.58
SMAD1-209ENST00000511125 C14orf177Q52M58 125 aa5.18□□□□□ -1.58
SMAD1-209ENST00000511125 C9orf129Q5T035 196 aaKnown RBP5.18□□□□□ -1.58
SMAD1-209ENST00000511125 HSD52Q0P140 79 aa5.18□□□□□ -1.58
SMAD1-209ENST00000511125 SERTAD4-AS1Q5TG53 156 aa5.18□□□□□ -1.58
SMAD1-209ENST00000511125 TRBV30A0A0K0K1B3 111 aa5.17□□□□□ -1.58
SMAD1-209ENST00000511125 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.17□□□□□ -1.58
SMAD1-209ENST00000511125 IGKV2-28A0A075B6P5 120 aa5.17□□□□□ -1.58
SMAD1-209ENST00000511125 IGKV2D-28P01615 120 aa5.17□□□□□ -1.58
SMAD1-209ENST00000511125 FAM30AQ9NZY2 134 aa5.17□□□□□ -1.58
SMAD1-209ENST00000511125 A0A1W2PNN7 141 aa5.16□□□□□ -1.58
SMAD1-209ENST00000511125 C9orf163Q8N9P6 203 aa5.16□□□□□ -1.58
SMAD1-209ENST00000511125 HIGD1BQ9P298 99 aa5.16□□□□□ -1.58
SMAD1-209ENST00000511125 DNAH5Q8TE73 4624 aa5.16□□□□□ -1.58
SMAD1-209ENST00000511125 LOC107984640A0A0U1RRK4 108 aa5.16□□□□□ -1.58
SMAD1-209ENST00000511125 Q1RN00 199 aa5.16□□□□□ -1.58
SMAD1-209ENST00000511125 M0R143 59 aa5.15□□□□□ -1.58
SMAD1-209ENST00000511125 CFC1BP0CG36 223 aa5.15□□□□□ -1.58
SMAD1-209ENST00000511125 CFC1P0CG37 223 aa5.15□□□□□ -1.58
SMAD1-209ENST00000511125 SDIM1Q6ZPB5 146 aa5.15□□□□□ -1.58
SMAD1-209ENST00000511125 KRTAP10-1P60331 282 aa5.15□□□□□ -1.59
SMAD1-209ENST00000511125 CNBPP62633 177 aaKnown RBP5.15□□□□□ -1.59
SMAD1-209ENST00000511125 RPL24P83731 157 aaKnown RBP5.15□□□□□ -1.59
SMAD1-209ENST00000511125 SPANXDQ9BXN6 97 aa5.15□□□□□ -1.59
SMAD1-209ENST00000511125 SPANXCQ9NY87 97 aa5.15□□□□□ -1.59
SMAD1-209ENST00000511125 PKD1P98161 4303 aa5.15□□□□□ -1.59
SMAD1-209ENST00000511125 SPANXB1Q9NS25 103 aaPredicted RBP5.14□□□□□ -1.59
SMAD1-209ENST00000511125 C16orf90A8MZG2 172 aa5.14□□□□□ -1.59
SMAD1-209ENST00000511125 S100A7L2Q5SY68 101 aa5.14□□□□□ -1.59
SMAD1-209ENST00000511125 PHF5AQ7RTV0 110 aaKnown RBP5.14□□□□□ -1.59
SMAD1-209ENST00000511125 LINC00337Q8N6G1 96 aa5.14□□□□□ -1.59
SMAD1-209ENST00000511125 COX17Q14061 63 aa5.14□□□□□ -1.59
SMAD1-209ENST00000511125 NKAPP1Q8N9T2 125 aa5.14□□□□□ -1.59
SMAD1-209ENST00000511125 TIMM17BO60830 172 aa5.13□□□□□ -1.59
SMAD1-209ENST00000511125 RPL13AP40429 203 aaKnown RBP5.13□□□□□ -1.59
SMAD1-209ENST00000511125 KRTAP7-1Q8IUC3 87 aa5.13□□□□□ -1.59
SMAD1-209ENST00000511125 A0A087WYN8 130 aa5.13□□□□□ -1.59
SMAD1-209ENST00000511125 SRRM2Q9UQ35 2752 aaKnown RBP5.12□□□□□ -1.59
SMAD1-209ENST00000511125 PGPEP1Q9NXJ5 209 aa5.12□□□□□ -1.59
SMAD1-209ENST00000511125 LOC107984156A0A0G2JMH3 177 aa5.12□□□□□ -1.59
SMAD1-209ENST00000511125 SMR3BP02814 79 aaPredicted RBP5.12□□□□□ -1.59
SMAD1-209ENST00000511125 ARL17AQ8IVW1 177 aa5.12□□□□□ -1.59
SMAD1-209ENST00000511125 C22orf24Q9Y442 160 aa5.12□□□□□ -1.59
SMAD1-209ENST00000511125 EPPK1P58107 5090 aaKnown RBP5.12□□□□□ -1.59
SMAD1-209ENST00000511125 TRBV10-3A0A0K0K1G6 114 aa5.12□□□□□ -1.59
SMAD1-209ENST00000511125 H3BUT2 72 aa5.12□□□□□ -1.59
SMAD1-209ENST00000511125 PSMB2P49721 201 aa5.12□□□□□ -1.59
SMAD1-209ENST00000511125 M0QXV9 152 aa5.11□□□□□ -1.59
SMAD1-209ENST00000511125 UBE2BP63146 152 aa5.11□□□□□ -1.59
SMAD1-209ENST00000511125 TMEM238LA0A1B0GVL6 79 aa5.11□□□□□ -1.59
SMAD1-209ENST00000511125 A6NJY4 79 aa5.11□□□□□ -1.59
SMAD1-209ENST00000511125 VPREB1P12018 145 aa5.11□□□□□ -1.59
SMAD1-209ENST00000511125 IFITM1P13164 125 aa5.11□□□□□ -1.59
SMAD1-209ENST00000511125 TAL2Q16559 108 aa5.1□□□□□ -1.59
SMAD1-209ENST00000511125 KRTAP11-1Q8IUC1 163 aa5.1□□□□□ -1.59
SMAD1-209ENST00000511125 C7orf33Q8WU49 177 aa5.1□□□□□ -1.59
SMAD1-209ENST00000511125 LRP1BQ9NZR2 4599 aa5.1□□□□□ -1.59
SMAD1-209ENST00000511125 DYNC1H1Q14204 4646 aaKnown RBP5.1□□□□□ -1.59
SMAD1-209ENST00000511125 LINC00167Q96N53 147 aa5.1□□□□□ -1.59
SMAD1-209ENST00000511125 PRO1854Q9UHT4 67 aa5.1□□□□□ -1.59
SMAD1-209ENST00000511125 SCGB1C2P0DMR2 95 aa5.1□□□□□ -1.59
SMAD1-209ENST00000511125 RNF151Q2KHN1 245 aa5.09□□□□□ -1.59
SMAD1-209ENST00000511125 TAX1BP3O14907 124 aa5.08□□□□□ -1.6
SMAD1-209ENST00000511125 TSPAN13O95857 204 aa5.08□□□□□ -1.6
SMAD1-209ENST00000511125 TLX1NBP0CAT3 122 aa5.08□□□□□ -1.6
SMAD1-209ENST00000511125 COL5A1-AS1Q5SY13 56 aa5.08□□□□□ -1.6
SMAD1-209ENST00000511125 LINC00336Q6ZUF6 198 aa5.08□□□□□ -1.6
SMAD1-209ENST00000511125 SCXQ7RTU7 201 aa5.08□□□□□ -1.6
SMAD1-209ENST00000511125 MTURNQ8N3F0 131 aa5.08□□□□□ -1.6
SMAD1-209ENST00000511125 CIRBP-AS1Q8TBR5 109 aa5.08□□□□□ -1.6
SMAD1-209ENST00000511125 MRPL55Q7Z7F7 128 aaKnown RBP5.08□□□□□ -1.6
SMAD1-209ENST00000511125 SMIM11BQ8TCY0 68 aa5.08□□□□□ -1.6
SMAD1-209ENST00000511125 DNAH8Q96JB1 4490 aa5.08□□□□□ -1.6
SMAD1-209ENST00000511125 F8WDY8 70 aa5.08□□□□□ -1.6
SMAD1-209ENST00000511125 A0A1B0GV90 55 aa5.07□□□□□ -1.6
SMAD1-209ENST00000511125 C6orf99Q4VX62 202 aa5.07□□□□□ -1.6
SMAD1-209ENST00000511125 SPACA4Q8TDM5 124 aa5.07□□□□□ -1.6
SMAD1-209ENST00000511125 COPS9Q8WXC6 57 aa5.07□□□□□ -1.6
SMAD1-209ENST00000511125 CLEC2BQ92478 149 aa5.07□□□□□ -1.6
SMAD1-209ENST00000511125 A0A1B0GVY2 172 aa5.06□□□□□ -1.6
SMAD1-209ENST00000511125 M0R378 163 aa5.06□□□□□ -1.6
SMAD1-209ENST00000511125 A0A1B0GV72 72 aa5.06□□□□□ -1.6
SMAD1-209ENST00000511125 TRAV13-2A0A0B4J235 113 aa5.06□□□□□ -1.6
SMAD1-209ENST00000511125 TRIAP1O43715 76 aa5.06□□□□□ -1.6
SMAD1-209ENST00000511125 PRLHP81277 87 aa5.06□□□□□ -1.6
SMAD1-209ENST00000511125 VAMP3Q15836 100 aa5.05□□□□□ -1.6
SMAD1-209ENST00000511125 TMEM126AQ9H061 195 aa5.05□□□□□ -1.6
SMAD1-209ENST00000511125 A0A0B4J2C4 111 aa5.05□□□□□ -1.6
SMAD1-209ENST00000511125 FAT1Q14517 4588 aa5.05□□□□□ -1.6
SMAD1-209ENST00000511125 TRAV23DV6A0A075B6W5 121 aa5.04□□□□□ -1.6
SMAD1-209ENST00000511125 NDUFC2O95298 119 aa5.04□□□□□ -1.6
SMAD1-209ENST00000511125 KIAA1109Q2LD37 5005 aa5.04□□□□□ -1.6
SMAD1-209ENST00000511125 LINC00474Q9P2X8 69 aa5.04□□□□□ -1.6
SMAD1-209ENST00000511125 FAM19A1Q7Z5A9 133 aa5.03□□□□□ -1.6
SMAD1-209ENST00000511125 C9orf118A6NHY6 69 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms