RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 IFITM2Q01629 132 aa2.88□□□□□ -1.95
PTPN13-208ENST00000511105 SS18Q15532 418 aa2.88□□□□□ -1.95
PTPN13-208ENST00000511105 TMEM136Q6ZRR5 245 aa2.88□□□□□ -1.95
PTPN13-208ENST00000511105 Q6ZUT4 128 aa2.88□□□□□ -1.95
PTPN13-208ENST00000511105 A0A096LNI7 61 aa2.87□□□□□ -1.95
PTPN13-208ENST00000511105 RAB14P61106 215 aa2.87□□□□□ -1.95
PTPN13-208ENST00000511105 Q6ZRU5 148 aa2.87□□□□□ -1.95
PTPN13-208ENST00000511105 PRELID3AQ96N28 172 aa2.87□□□□□ -1.95
PTPN13-208ENST00000511105 IMMP2LQ96T52 175 aa2.87□□□□□ -1.95
PTPN13-208ENST00000511105 UBE2D4Q9Y2X8 147 aa2.87□□□□□ -1.95
PTPN13-208ENST00000511105 PKHD1L1Q86WI1 4243 aa2.86□□□□□ -1.95
PTPN13-208ENST00000511105 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.86□□□□□ -1.95
PTPN13-208ENST00000511105 TRBV27A0A0K0K1C4 114 aa2.86□□□□□ -1.95
PTPN13-208ENST00000511105 A0A1W2PNN7 141 aa2.86□□□□□ -1.95
PTPN13-208ENST00000511105 C7orf77A4D0Y5 90 aa2.86□□□□□ -1.95
PTPN13-208ENST00000511105 F8W036 122 aa2.86□□□□□ -1.95
PTPN13-208ENST00000511105 HBBP68871 147 aa2.86□□□□□ -1.95
PTPN13-208ENST00000511105 Q5W150 140 aa2.86□□□□□ -1.95
PTPN13-208ENST00000511105 SRRM2Q9UQ35 2752 aaKnown RBP2.85□□□□□ -1.95
PTPN13-208ENST00000511105 IGHV1-58A0A0C4DH39 117 aa2.85□□□□□ -1.95
PTPN13-208ENST00000511105 ADCYAP1P18509 176 aa2.85□□□□□ -1.95
PTPN13-208ENST00000511105 CNBPP62633 177 aaKnown RBP2.85□□□□□ -1.95
PTPN13-208ENST00000511105 C9orf116Q5BN46 136 aaPredicted RBP2.85□□□□□ -1.95
PTPN13-208ENST00000511105 UNQ6190/PRO20217Q6UXQ8 127 aa2.85□□□□□ -1.95
PTPN13-208ENST00000511105 PHF5AQ7RTV0 110 aaKnown RBP2.85□□□□□ -1.95
PTPN13-208ENST00000511105 SPACA4Q8TDM5 124 aa2.85□□□□□ -1.95
PTPN13-208ENST00000511105 ORAOV1Q8WV07 137 aa2.85□□□□□ -1.95
PTPN13-208ENST00000511105 SMIM2Q9BVW6 85 aa2.85□□□□□ -1.95
PTPN13-208ENST00000511105 SND1-IT1Q9HBX3 110 aa2.85□□□□□ -1.95
PTPN13-208ENST00000511105 ANAPC11Q9NYG5 84 aa2.85□□□□□ -1.95
PTPN13-208ENST00000511105 RBM12B-AS1Q9P1G2 102 aa2.85□□□□□ -1.95
PTPN13-208ENST00000511105 HMCN2Q8NDA2 5059 aa2.84□□□□□ -1.95
PTPN13-208ENST00000511105 LINC00862A6NCI5 91 aa2.84□□□□□ -1.95
PTPN13-208ENST00000511105 C1orf196B1AJZ1 125 aa2.84□□□□□ -1.95
PTPN13-208ENST00000511105 COX7A2LO14548 114 aa2.84□□□□□ -1.95
PTPN13-208ENST00000511105 MT-ND4LP03901 98 aa2.84□□□□□ -1.95
PTPN13-208ENST00000511105 ZNF25P17030 456 aaPredicted RBP2.84□□□□□ -1.95
PTPN13-208ENST00000511105 IFI27P40305 119 aaPredicted RBP2.84□□□□□ -1.95
PTPN13-208ENST00000511105 C4orf26Q17RF5 130 aa2.84□□□□□ -1.95
PTPN13-208ENST00000511105 C2orf82Q6UX34 121 aa2.84□□□□□ -1.95
PTPN13-208ENST00000511105 KRTAP11-1Q8IUC1 163 aa2.84□□□□□ -1.95
PTPN13-208ENST00000511105 CARD19Q96LW7 228 aa2.84□□□□□ -1.95
PTPN13-208ENST00000511105 C20orf78Q9BR46 151 aa2.84□□□□□ -1.95
PTPN13-208ENST00000511105 TOMM7Q9P0U1 55 aa2.84□□□□□ -1.95
PTPN13-208ENST00000511105 UBR4Q5T4S7 5183 aa2.84□□□□□ -1.96
PTPN13-208ENST00000511105 TRBV24-1A0A075B6N3 115 aa2.83□□□□□ -1.96
PTPN13-208ENST00000511105 GVQW2A0A096LPI5 108 aaPredicted RBP2.83□□□□□ -1.96
PTPN13-208ENST00000511105 TMEM218A2RU14 115 aa2.83□□□□□ -1.96
PTPN13-208ENST00000511105 SPAG11BQ08648 103 aa2.83□□□□□ -1.96
PTPN13-208ENST00000511105 DEFB116Q30KQ4 102 aa2.83□□□□□ -1.96
PTPN13-208ENST00000511105 CLLU1Q5K131 121 aa2.83□□□□□ -1.96
PTPN13-208ENST00000511105 COMMD7Q86VX2 200 aa2.83□□□□□ -1.96
PTPN13-208ENST00000511105 ORMDL3Q8N138 153 aa2.83□□□□□ -1.96
PTPN13-208ENST00000511105 Q8N8P6 123 aa2.83□□□□□ -1.96
PTPN13-208ENST00000511105 PACRGQ96M98 296 aaPredicted RBP2.83□□□□□ -1.96
PTPN13-208ENST00000511105 PLAC8Q9NZF1 115 aa2.83□□□□□ -1.96
PTPN13-208ENST00000511105 TGIF2-C20orf24A0A0A6YYL0 155 aa2.82□□□□□ -1.96
PTPN13-208ENST00000511105 LOC107984640A0A0U1RRK4 108 aa2.82□□□□□ -1.96
PTPN13-208ENST00000511105 TINCRA0A1B0GVN0 87 aa2.82□□□□□ -1.96
PTPN13-208ENST00000511105 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.82□□□□□ -1.96
PTPN13-208ENST00000511105 PPP1R17O96001 155 aa2.82□□□□□ -1.96
PTPN13-208ENST00000511105 S100A8P05109 93 aa2.82□□□□□ -1.96
PTPN13-208ENST00000511105 NDUFA6P56556 154 aa2.82□□□□□ -1.96
PTPN13-208ENST00000511105 RAB5BP61020 215 aa2.82□□□□□ -1.96
PTPN13-208ENST00000511105 FABP9Q0Z7S8 132 aa2.82□□□□□ -1.96
PTPN13-208ENST00000511105 CIRBPQ14011 172 aaKnown RBP2.82□□□□□ -1.96
PTPN13-208ENST00000511105 FAM19A5Q7Z5A7 132 aaPredicted RBP2.82□□□□□ -1.96
PTPN13-208ENST00000511105 MAP1LC3AQ9H492 121 aa2.82□□□□□ -1.96
PTPN13-208ENST00000511105 SMDT1Q9H4I9 107 aa2.82□□□□□ -1.96
PTPN13-208ENST00000511105 C6orf48Q9UBA6 75 aa2.82□□□□□ -1.96
PTPN13-208ENST00000511105 C8orf87E5RJ46 101 aa2.81□□□□□ -1.96
PTPN13-208ENST00000511105 APOMO95445 188 aa2.81□□□□□ -1.96
PTPN13-208ENST00000511105 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
PTPN13-208ENST00000511105 PMCHL1Q16048 86 aa2.81□□□□□ -1.96
PTPN13-208ENST00000511105 COX19Q49B96 90 aa2.81□□□□□ -1.96
PTPN13-208ENST00000511105 PDZD11Q5EBL8 140 aa2.81□□□□□ -1.96
PTPN13-208ENST00000511105 C1orf137Q5JT78 98 aa2.81□□□□□ -1.96
PTPN13-208ENST00000511105 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
PTPN13-208ENST00000511105 TMEM141Q96I45 108 aa2.81□□□□□ -1.96
PTPN13-208ENST00000511105 NDUFA1O15239 70 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 APOC3P02656 99 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 PPBPP02775 128 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 MT-ND6P03923 174 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 SPINK8P0C7L1 97 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 UBE2D1P51668 147 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 ATP5L2Q7Z4Y8 100 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 YPEL4Q96NS1 127 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 TIMM21Q9BVV7 248 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 XAGE1AQ9HD64 81 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 SPANXA1Q9NS26 97 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 CDKN2A-AS1Q9UH64 79 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 PSORS1C2Q9UIG4 136 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 CYSLTR1Q9Y271 337 aa2.8□□□□□ -1.96
PTPN13-208ENST00000511105 IGIPA6NJ69 53 aa2.79□□□□□ -1.96
PTPN13-208ENST00000511105 SCO1O75880 301 aa2.79□□□□□ -1.96
PTPN13-208ENST00000511105 S100PP25815 95 aa2.79□□□□□ -1.96
PTPN13-208ENST00000511105 MRPS36P82909 103 aaKnown RBP2.79□□□□□ -1.96
PTPN13-208ENST00000511105 SMAGPQ0VAQ4 97 aa2.79□□□□□ -1.96
PTPN13-208ENST00000511105 SPANXA2-OT1Q8N9U9 137 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms