RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 PSORS1C2Q9UIG4 136 aa5.28□□□□□ -1.56
PDPN-209ENST00000510906 TRBV30A0A0K0K1B3 111 aa5.27□□□□□ -1.57
PDPN-209ENST00000510906 FAM19A5Q7Z5A7 132 aaPredicted RBP5.27□□□□□ -1.57
PDPN-209ENST00000510906 FAM19A3Q7Z5A8 133 aa5.27□□□□□ -1.57
PDPN-209ENST00000510906 KRTAP11-1Q8IUC1 163 aa5.27□□□□□ -1.57
PDPN-209ENST00000510906 KRTAP7-1Q8IUC3 87 aa5.27□□□□□ -1.57
PDPN-209ENST00000510906 HIST3H2BBQ8N257 126 aa5.27□□□□□ -1.57
PDPN-209ENST00000510906 TIMM17AQ99595 171 aa5.27□□□□□ -1.57
PDPN-209ENST00000510906 ALKBH7Q9BT30 221 aaPredicted RBP5.27□□□□□ -1.57
PDPN-209ENST00000510906 GNB1LQ9BYB4 327 aa5.27□□□□□ -1.57
PDPN-209ENST00000510906 TOMM7Q9P0U1 55 aa5.27□□□□□ -1.57
PDPN-209ENST00000510906 CDKN2A-AS1Q9UH64 79 aa5.27□□□□□ -1.57
PDPN-209ENST00000510906 TRAPPC1Q9Y5R8 145 aa5.27□□□□□ -1.57
PDPN-209ENST00000510906 HERVK_113P63121 156 aa5.26□□□□□ -1.57
PDPN-209ENST00000510906 C1orf137Q5JT78 98 aa5.26□□□□□ -1.57
PDPN-209ENST00000510906 REG3GQ6UW15 175 aa5.26□□□□□ -1.57
PDPN-209ENST00000510906 ERASQ7Z444 233 aa5.26□□□□□ -1.57
PDPN-209ENST00000510906 PACRGQ96M98 296 aaPredicted RBP5.26□□□□□ -1.57
PDPN-209ENST00000510906 SCGB3A1Q96QR1 104 aa5.26□□□□□ -1.57
PDPN-209ENST00000510906 NDUFC2-KCTD14E9PQ53 114 aa5.25□□□□□ -1.57
PDPN-209ENST00000510906 G0S2P27469 103 aa5.25□□□□□ -1.57
PDPN-209ENST00000510906 KRTAP10-8P60410 259 aa5.25□□□□□ -1.57
PDPN-209ENST00000510906 C6orf226Q5I0X4 101 aa5.25□□□□□ -1.57
PDPN-209ENST00000510906 C9orf129Q5T035 196 aaKnown RBP5.25□□□□□ -1.57
PDPN-209ENST00000510906 Q8IZM0 81 aa5.25□□□□□ -1.57
PDPN-209ENST00000510906 GEMIN7Q9H840 131 aaKnown RBP5.25□□□□□ -1.57
PDPN-209ENST00000510906 LINC01546A6NGU7 62 aa5.24□□□□□ -1.57
PDPN-209ENST00000510906 M0QXV9 152 aa5.24□□□□□ -1.57
PDPN-209ENST00000510906 CKS1BP61024 79 aa5.24□□□□□ -1.57
PDPN-209ENST00000510906 SEC11AP67812 179 aa5.24□□□□□ -1.57
PDPN-209ENST00000510906 LINC00469Q8N7U9 141 aa5.24□□□□□ -1.57
PDPN-209ENST00000510906 SMIM1B2RUZ4 78 aa5.23□□□□□ -1.57
PDPN-209ENST00000510906 IGLV7-43P04211 117 aa5.23□□□□□ -1.57
PDPN-209ENST00000510906 FABP4P15090 132 aa5.23□□□□□ -1.57
PDPN-209ENST00000510906 FA2HQ7L5A8 372 aa5.23□□□□□ -1.57
PDPN-209ENST00000510906 HIST1H2BLQ99880 126 aa5.23□□□□□ -1.57
PDPN-209ENST00000510906 TINCRA0A1B0GVN0 87 aa5.22□□□□□ -1.57
PDPN-209ENST00000510906 UBE2BP63146 152 aa5.22□□□□□ -1.57
PDPN-209ENST00000510906 SMIM29Q86T20 159 aa5.22□□□□□ -1.57
PDPN-209ENST00000510906 CST9LQ9H4G1 147 aa5.22□□□□□ -1.57
PDPN-209ENST00000510906 XAGE1AQ9HD64 81 aa5.22□□□□□ -1.57
PDPN-209ENST00000510906 A0A096LNJ9 63 aa5.21□□□□□ -1.58
PDPN-209ENST00000510906 IGLV9-49A0A0B4J1Y8 123 aa5.21□□□□□ -1.58
PDPN-209ENST00000510906 LINC01549A6NIU2 74 aa5.21□□□□□ -1.58
PDPN-209ENST00000510906 F8VRH5 84 aa5.21□□□□□ -1.58
PDPN-209ENST00000510906 SPINK8P0C7L1 97 aa5.21□□□□□ -1.58
PDPN-209ENST00000510906 IGKV2D-30A0A075B6S6 120 aa5.2□□□□□ -1.58
PDPN-209ENST00000510906 CXCL5P42830 114 aa5.2□□□□□ -1.58
PDPN-209ENST00000510906 JOSD1Q15040 202 aaPredicted RBP5.2□□□□□ -1.58
PDPN-209ENST00000510906 PMVKQ15126 192 aa5.2□□□□□ -1.58
PDPN-209ENST00000510906 PDZD11Q5EBL8 140 aa5.2□□□□□ -1.58
PDPN-209ENST00000510906 PYY3Q5JQD4 70 aa5.2□□□□□ -1.58
PDPN-209ENST00000510906 BAGE3Q86Y29 109 aa5.2□□□□□ -1.58
PDPN-209ENST00000510906 C18orf32Q8TCD1 76 aa5.2□□□□□ -1.58
PDPN-209ENST00000510906 COX7B2Q8TF08 81 aa5.2□□□□□ -1.58
PDPN-209ENST00000510906 DIRC1Q969H9 104 aa5.2□□□□□ -1.58
PDPN-209ENST00000510906 PCP4L1A6NKN8 68 aa5.19□□□□□ -1.58
PDPN-209ENST00000510906 H0Y9J4 135 aa5.19□□□□□ -1.58
PDPN-209ENST00000510906 C22orf24Q9Y442 160 aa5.19□□□□□ -1.58
PDPN-209ENST00000510906 TSTD3H0UI37 97 aa5.18□□□□□ -1.58
PDPN-209ENST00000510906 LINC00614P0C842 121 aa5.18□□□□□ -1.58
PDPN-209ENST00000510906 IGLC3P0DOY3 106 aa5.18□□□□□ -1.58
PDPN-209ENST00000510906 PMCHL1Q16048 86 aa5.18□□□□□ -1.58
PDPN-209ENST00000510906 H3BRM9 83 aa5.17□□□□□ -1.58
PDPN-209ENST00000510906 SERF1AO75920 110 aa5.17□□□□□ -1.58
PDPN-209ENST00000510906 HBDP02042 147 aa5.17□□□□□ -1.58
PDPN-209ENST00000510906 KRTAP1-4P0C5Y4 121 aa5.17□□□□□ -1.58
PDPN-209ENST00000510906 ZNF22P17026 224 aaPredicted RBP5.16□□□□□ -1.58
PDPN-209ENST00000510906 MRPL55Q7Z7F7 128 aaKnown RBP5.16□□□□□ -1.58
PDPN-209ENST00000510906 TP73-AS1Q9UF72 201 aa5.16□□□□□ -1.58
PDPN-209ENST00000510906 ZNF861PO60384 105 aa5.15□□□□□ -1.59
PDPN-209ENST00000510906 CHCHD1Q96BP2 118 aaKnown RBP5.15□□□□□ -1.59
PDPN-209ENST00000510906 LINC00167Q96N53 147 aa5.15□□□□□ -1.59
PDPN-209ENST00000510906 C11orf86A6NJI1 115 aa5.14□□□□□ -1.59
PDPN-209ENST00000510906 RPL37AP8A6NKH3 93 aa5.14□□□□□ -1.59
PDPN-209ENST00000510906 NUPR1O60356 82 aa5.14□□□□□ -1.59
PDPN-209ENST00000510906 HSBP1O75506 76 aa5.14□□□□□ -1.59
PDPN-209ENST00000510906 ATP5LO75964 103 aa5.14□□□□□ -1.59
PDPN-209ENST00000510906 PFN2P35080 140 aa5.14□□□□□ -1.59
PDPN-209ENST00000510906 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
PDPN-209ENST00000510906 IGLV1-50A0A075B6I6 118 aa5.13□□□□□ -1.59
PDPN-209ENST00000510906 TMEM170BQ5T4T1 132 aa5.13□□□□□ -1.59
PDPN-209ENST00000510906 BCE1O60756 84 aa5.12□□□□□ -1.59
PDPN-209ENST00000510906 NKAPP1Q8N9T2 125 aa5.12□□□□□ -1.59
PDPN-209ENST00000510906 ZNF625Q96I27 306 aaPredicted RBP5.12□□□□□ -1.59
PDPN-209ENST00000510906 ERG28Q9UKR5 140 aa5.12□□□□□ -1.59
PDPN-209ENST00000510906 CHTOPQ9Y3Y2 248 aaKnown RBP5.12□□□□□ -1.59
PDPN-209ENST00000510906 LINC00587B1AMM8 73 aa5.11□□□□□ -1.59
PDPN-209ENST00000510906 DDTP30046 118 aa5.11□□□□□ -1.59
PDPN-209ENST00000510906 RPL28P46779 137 aaKnown RBP5.11□□□□□ -1.59
PDPN-209ENST00000510906 CTAG1AP78358 180 aa5.11□□□□□ -1.59
PDPN-209ENST00000510906 SND1-IT1Q9HBX3 110 aa5.11□□□□□ -1.59
PDPN-209ENST00000510906 IGKV2-28A0A075B6P5 120 aa5.1□□□□□ -1.59
PDPN-209ENST00000510906 C20orf202A1L168 122 aa5.1□□□□□ -1.59
PDPN-209ENST00000510906 IGKV2D-28P01615 120 aa5.1□□□□□ -1.59
PDPN-209ENST00000510906 KRTDAPP60985 99 aa5.1□□□□□ -1.59
PDPN-209ENST00000510906 FAM19A2Q8N3H0 131 aa5.1□□□□□ -1.59
PDPN-209ENST00000510906 Q8NDZ9 215 aa5.1□□□□□ -1.59
PDPN-209ENST00000510906 IFI27L1Q96BM0 104 aa5.1□□□□□ -1.59
PDPN-209ENST00000510906 VAMP8Q9BV40 100 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms