RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.24□□□□□ -2.21
PDE4D-218ENST00000509368 DYNC2H1Q8NCM8 4307 aaKnown RBP1.24□□□□□ -2.21
PDE4D-218ENST00000509368 TENM3Q9P273 2699 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 hADV29S1A0JD25 119 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 H3BUT2 72 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 ASAH2BP0C7U1 165 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 COX8AP10176 69 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 HRES1P13985 223 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 LINC00315P59091 139 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 UBE2D3P61077 147 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 UBE2D2P62837 147 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 WFDC2Q14508 124 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 FAM229BQ4G0N7 80 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 ATP5EP2Q5VTU8 51 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 Q86TA4 180 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 LINC00269Q8N2A0 174 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 LYPD1Q8N2G4 141 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 LIMD2Q9BT23 127 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 BPESC1Q9GZL8 116 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 CST11Q9H112 138 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 CDC42SE1Q9NRR8 79 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 MED12LQ86YW9 2145 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 FREM3P0C091 2139 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 H7C2G1 150 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 IGLV1-51P01701 117 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 C4orf3Q8WVX3 66 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 IFI27L1Q96BM0 104 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 ZC2HC1AQ96GY0 325 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 ODF3Q96PU9 254 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 AMELXQ99217 191 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 NXT2Q9NPJ8 142 aaKnown RBP1.24□□□□□ -2.21
PDE4D-218ENST00000509368 TIMM9Q9Y5J7 89 aa1.24□□□□□ -2.21
PDE4D-218ENST00000509368 MALRD1Q5VYJ5 2156 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 IGKV1D-17A0A075B6S4 117 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 TRBV6-7A0A0A0MS04 114 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 TRAV1-1A0A0B4J248 108 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 H7BZZ5 65 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 PIN1P1O15428 100 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 Q8N814 137 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 TRAV23DV6A0A075B6W5 121 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 CLPSL1A2RUU4 121 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 A6NIN4 97 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 M0R129 80 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 RTL8CO15255 209 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 ROS1P08922 2347 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 ROMO1P60602 79 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 C9orf116Q5BN46 136 aaPredicted RBP1.23□□□□□ -2.21
PDE4D-218ENST00000509368 C2orf82Q6UX34 121 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 CYP2G1PQ6ZSU1 146 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 SACSQ9NZJ4 4579 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 PRO1854Q9UHT4 67 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 EPPK1P58107 5090 aaKnown RBP1.23□□□□□ -2.21
PDE4D-218ENST00000509368 DNAH9Q9NYC9 4486 aa1.23□□□□□ -2.21
PDE4D-218ENST00000509368 MED12Q93074 2177 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 SCN3AQ9NY46 2000 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 WNK1Q9H4A3 2382 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 TRBV25-1A0A075B6N4 114 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 SPRR5A0A1B0GTR4 108 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 C11orf86A6NJI1 115 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 ODF3BA8MYP8 253 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 IGHV3-33P01772 117 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 HMGN2P05204 90 aaKnown RBP1.22□□□□□ -2.21
PDE4D-218ENST00000509368 RPL28P46779 137 aaKnown RBP1.22□□□□□ -2.21
PDE4D-218ENST00000509368 CASC2Q6XLA1 102 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 FAM213BQ8TBF2 198 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 TTTY13Q9BZ97 58 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 NDUFA12Q9UI09 145 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 PLXNB1O43157 2135 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 IGHV1-18A0A0C4DH31 117 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 A0A0J9YX75 114 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 A0A1W2PNM2 257 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 IGLV6-57P01721 117 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 SUPT4H1P63272 117 aaKnown RBP1.22□□□□□ -2.21
PDE4D-218ENST00000509368 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.22□□□□□ -2.21
PDE4D-218ENST00000509368 WFDC9Q8NEX5 89 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 PRO2289Q9P1D8 64 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 RYR2Q92736 4967 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 NINQ8N4C6 2090 aa1.22□□□□□ -2.21
PDE4D-218ENST00000509368 CRYM-AS1A6NIL9 109 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 RNASE2P10153 161 aaKnown RBP1.21□□□□□ -2.22
PDE4D-218ENST00000509368 KRTAP12-2P59991 146 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 S100A7L2Q5SY68 101 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 DEFB108BQ8NET1 73 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 LINC00167Q96N53 147 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 COL7A1Q02388 2944 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 DOCK11Q5JSL3 2073 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 IGKV2-24A0A0C4DH68 120 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 LOC101927531A0A1B0GV80 90 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 A0A1B0GWA3 101 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 MRPL33O75394 65 aaKnown RBP1.21□□□□□ -2.22
PDE4D-218ENST00000509368 CRPP02741 224 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 ELOF1P60002 83 aaKnown RBP1.21□□□□□ -2.22
PDE4D-218ENST00000509368 RBM3P98179 157 aaKnown RBP1.21□□□□□ -2.22
PDE4D-218ENST00000509368 Q6JHZ5 121 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 TMEM254Q8TBM7 123 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 HERC2O95714 4834 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 ARFGEF3Q5TH69 2177 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 LCE6AA0A183 80 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 TMEM14DPA8MWL7 114 aa1.21□□□□□ -2.22
PDE4D-218ENST00000509368 FXYD1O00168 92 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms