RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.74□□□□□ -2.29
SNX2-208ENST00000509281 IGKV3OR2-268A0A0C4DH90 116 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 DUXBA0A1W2PPF3 345 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 RBAKDNA6NC62 111 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 FABP5P3A8MUU1 101 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 A8MWV9 139 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 M0R036 132 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 HMGB3O15347 200 aaKnown RBP0.74□□□□□ -2.29
SNX2-208ENST00000509281 CRPP02741 224 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 MT-ND6P03923 174 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 RNASE3P12724 160 aaKnown RBP0.74□□□□□ -2.29
SNX2-208ENST00000509281 S100A11P31949 105 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 CRIP1P50238 77 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 NKX2-5P52952 324 aaPredicted RBP0.74□□□□□ -2.29
SNX2-208ENST00000509281 DEFA3P59666 94 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 S100A10P60903 97 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 UBE2D3P61077 147 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 CNBPP62633 177 aaKnown RBP0.74□□□□□ -2.29
SNX2-208ENST00000509281 UBE2D2P62837 147 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 SSBP1Q04837 148 aaKnown RBP0.74□□□□□ -2.29
SNX2-208ENST00000509281 FABP9Q0Z7S8 132 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 SPCS2Q15005 226 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 FAM74A4Q5TZK3 123 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 UNQ6190/PRO20217Q6UXQ8 127 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 PHF5AQ7RTV0 110 aaKnown RBP0.74□□□□□ -2.29
SNX2-208ENST00000509281 TOMM5Q8N4H5 51 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 SMIM4Q8WVI0 70 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 PFDN5Q99471 154 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 DERL1Q9BUN8 251 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 GGACTQ9BVM4 153 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 UQCC1Q9NVA1 299 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 LENEPQ9Y5L5 61 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 MUC2Q02817 5179 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 TNXBP22105 4242 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 A0A087WXM4 84 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 TRAV1-1A0A0B4J248 108 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 PIGBOS1A0A0B4J2F0 54 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 IGHV1-24A0A0C4DH33 117 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 TRBV6-1A0A0K0K1D8 114 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 TRBV10-2A0A0K0K1G8 114 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 UBE2L5PA0A1B0GUS4 154 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 H3BVH4 76 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 SIX6O95475 246 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 LINC00694P0DN24 101 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 TPT1P13693 172 aaKnown RBP0.73□□□□□ -2.29
SNX2-208ENST00000509281 SULT1A1P50225 295 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 DEFA1P59665 94 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 RAB4BP61018 213 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 EIF5AP63241 154 aaKnown RBP0.73□□□□□ -2.29
SNX2-208ENST00000509281 UBE2L3P68036 154 aaKnown RBP0.73□□□□□ -2.29
SNX2-208ENST00000509281 CCL20P78556 96 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 MRPS10P82664 201 aaKnown RBP0.73□□□□□ -2.29
SNX2-208ENST00000509281 IFITM2Q01629 132 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 PDE6HQ13956 83 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 C9orf116Q5BN46 136 aaPredicted RBP0.73□□□□□ -2.29
SNX2-208ENST00000509281 FAM74A1Q5RGS3 127 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.73□□□□□ -2.29
SNX2-208ENST00000509281 AP3S1Q92572 193 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 DIRC1Q969H9 104 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 AQP10Q96PS8 301 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 SLC25A21Q9BQT8 299 aaPredicted RBP0.73□□□□□ -2.29
SNX2-208ENST00000509281 SMIM3Q9BZL3 60 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 Q9H521 79 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 OTORQ9NRC9 128 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 IL36BQ9NZH7 164 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 OR5AC2Q9NZP5 309 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 EPDR1Q9UM22 224 aa0.73□□□□□ -2.29
SNX2-208ENST00000509281 TRBV25-1A0A075B6N4 114 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.72□□□□□ -2.29
SNX2-208ENST00000509281 TRBV10-1A0A0K0K1A3 114 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 LOC107984640A0A0U1RRK4 108 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 LINC00959A0A1B0GUT2 108 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 IGKV2-29A2NJV5 120 aaPredicted RBP0.72□□□□□ -2.29
SNX2-208ENST00000509281 C17orf112F2Z3M2 114 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 CCL25O15444 150 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 NDUFB6O95139 128 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 TCRAP04437 139 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 TRGC1P0CF51 173 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 BCL2P10415 239 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 CRYGAP11844 174 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 GCHFRP30047 84 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 FAUP35544 74 aaKnown RBP0.72□□□□□ -2.29
SNX2-208ENST00000509281 AKR1C3P42330 323 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 UBE2D1P51668 147 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 AP3S2P59780 193 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 PKIAP61925 76 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 HIST1H4AP62805 103 aaKnown RBP0.72□□□□□ -2.29
SNX2-208ENST00000509281 CTAG1AP78358 180 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 ZNF56Q15929 161 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 BATFQ16520 125 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 IQCJQ1A5X6 159 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 TMEM97Q5BJF2 176 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 SPANXN1Q5VSR9 72 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 EIF5AL1Q6IS14 154 aaKnown RBP0.72□□□□□ -2.29
SNX2-208ENST00000509281 C5orf38Q86SI9 138 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 OR5A1Q8NGJ0 315 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 OR10AG1Q8NH19 301 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 NPCDR1Q9BY65 106 aa0.72□□□□□ -2.29
SNX2-208ENST00000509281 WDR61Q9GZS3 305 aaKnown RBP0.72□□□□□ -2.29
SNX2-208ENST00000509281 LYRM2Q9NU23 88 aaPredicted RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 258 ms