RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SPEGQ15772 3267 aa2.55□□□□□ -2
NEDD4-209ENST00000508871 ZNF861PO60384 105 aa2.55□□□□□ -2
NEDD4-209ENST00000508871 S4R3C0 116 aa2.55□□□□□ -2
NEDD4-209ENST00000508871 BDP1A6H8Y1 2624 aa2.55□□□□□ -2
NEDD4-209ENST00000508871 LINC00322Q6ZN03 302 aaPredicted RBP2.55□□□□□ -2
NEDD4-209ENST00000508871 Q8N9L7 120 aa2.55□□□□□ -2
NEDD4-209ENST00000508871 ST20-AS1Q8NBB2 130 aa2.55□□□□□ -2
NEDD4-209ENST00000508871 LORP23490 312 aaPredicted RBP2.55□□□□□ -2
NEDD4-209ENST00000508871 AKAP6Q13023 2319 aa2.55□□□□□ -2
NEDD4-209ENST00000508871 ZNF292O60281 2723 aa2.54□□□□□ -2
NEDD4-209ENST00000508871 H0Y9P7 68 aa2.54□□□□□ -2
NEDD4-209ENST00000508871 GDF5OSQ5U4N7 250 aa2.54□□□□□ -2
NEDD4-209ENST00000508871 AGRNO00468 2067 aa2.54□□□□□ -2
NEDD4-209ENST00000508871 NREPQ16612 68 aa2.54□□□□□ -2
NEDD4-209ENST00000508871 CNTRLQ7Z7A1 2325 aa2.54□□□□□ -2
NEDD4-209ENST00000508871 ZNF625Q96I27 306 aaPredicted RBP2.54□□□□□ -2
NEDD4-209ENST00000508871 VPS13AQ96RL7 3174 aa2.54□□□□□ -2
NEDD4-209ENST00000508871 A0A087WYN8 130 aa2.53□□□□□ -2
NEDD4-209ENST00000508871 DEFB114Q30KQ6 69 aa2.53□□□□□ -2
NEDD4-209ENST00000508871 PRO0461Q9UI25 63 aa2.53□□□□□ -2
NEDD4-209ENST00000508871 C16orf90A8MZG2 172 aa2.53□□□□□ -2.01
NEDD4-209ENST00000508871 ENHOQ6UWT2 76 aa2.53□□□□□ -2.01
NEDD4-209ENST00000508871 ZNF575Q86XF7 245 aa2.53□□□□□ -2.01
NEDD4-209ENST00000508871 IBA57-AS1B1ANH7 110 aa2.52□□□□□ -2.01
NEDD4-209ENST00000508871 TRBV6-5A0A0K0K1A5 114 aa2.52□□□□□ -2.01
NEDD4-209ENST00000508871 FRYQ5TBA9 3013 aa2.52□□□□□ -2.01
NEDD4-209ENST00000508871 NAV3Q8IVL0 2385 aa2.52□□□□□ -2.01
NEDD4-209ENST00000508871 GPR179Q6PRD1 2367 aa2.52□□□□□ -2.01
NEDD4-209ENST00000508871 C22orf24Q9Y442 160 aa2.52□□□□□ -2.01
NEDD4-209ENST00000508871 EPM2AB3EWF7 344 aa2.52□□□□□ -2.01
NEDD4-209ENST00000508871 KLKP1Q107X0 134 aa2.52□□□□□ -2.01
NEDD4-209ENST00000508871 MAPK1IP1LQ8NDC0 245 aa2.52□□□□□ -2.01
NEDD4-209ENST00000508871 AKAP13Q12802 2813 aa2.51□□□□□ -2.01
NEDD4-209ENST00000508871 A0A0J9YY99 117 aa2.51□□□□□ -2.01
NEDD4-209ENST00000508871 R4GN34 69 aa2.51□□□□□ -2.01
NEDD4-209ENST00000508871 FREM2Q5SZK8 3169 aa2.51□□□□□ -2.01
NEDD4-209ENST00000508871 A6NN06 94 aa2.51□□□□□ -2.01
NEDD4-209ENST00000508871 RTL8CO15255 209 aa2.51□□□□□ -2.01
NEDD4-209ENST00000508871 IGLV1-51P01701 117 aa2.51□□□□□ -2.01
NEDD4-209ENST00000508871 PRR9Q5T870 116 aa2.51□□□□□ -2.01
NEDD4-209ENST00000508871 TMEM263Q8WUH6 116 aaKnown RBP2.51□□□□□ -2.01
NEDD4-209ENST00000508871 Q8NAQ8 132 aa2.51□□□□□ -2.01
NEDD4-209ENST00000508871 PDE6GP18545 87 aa2.51□□□□□ -2.01
NEDD4-209ENST00000508871 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
NEDD4-209ENST00000508871 AKAP9Q99996 3911 aa2.5□□□□□ -2.01
NEDD4-209ENST00000508871 H7BZZ5 65 aa2.5□□□□□ -2.01
NEDD4-209ENST00000508871 C10orf99Q6UWK7 81 aa2.5□□□□□ -2.01
NEDD4-209ENST00000508871 Q8N3U1 123 aa2.5□□□□□ -2.01
NEDD4-209ENST00000508871 PTPRZ1P23471 2315 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-209ENST00000508871 GAS8-AS1O95177 125 aa2.5□□□□□ -2.01
NEDD4-209ENST00000508871 MOBPQ13875 183 aa2.5□□□□□ -2.01
NEDD4-209ENST00000508871 WDFY4Q6ZS81 3184 aa2.5□□□□□ -2.01
NEDD4-209ENST00000508871 PTPRQQ9UMZ3 2332 aa2.5□□□□□ -2.01
NEDD4-209ENST00000508871 KIF25-AS1Q9Y6Z4 181 aa2.5□□□□□ -2.01
NEDD4-209ENST00000508871 A0A0C4DFX4 3053 aa2.5□□□□□ -2.01
NEDD4-209ENST00000508871 ANK3Q12955 4377 aaKnown RBP2.5□□□□□ -2.01
NEDD4-209ENST00000508871 USF3Q68DE3 2245 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 ABCA2Q9BZC7 2435 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 ICE1Q9Y2F5 2266 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 UBE2D3P61077 147 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 UBE2D2P62837 147 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 KRTAP19-4Q3LI73 84 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 PLCE1Q9P212 2302 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 KRTAP4-16G5E9R7 235 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-209ENST00000508871 UBE2DNLQ8IWF7 75 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 SMIM2Q9BVW6 85 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 IGHV3OR16-8A0A075B7F1 116 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 I3L3M4 83 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 DEFB131AP59861 70 aa2.49□□□□□ -2.01
NEDD4-209ENST00000508871 TRGV1A0A0A0MS02 117 aa2.48□□□□□ -2.01
NEDD4-209ENST00000508871 SPANXA2-OT1Q8N9U9 137 aa2.48□□□□□ -2.01
NEDD4-209ENST00000508871 MUC6Q6W4X9 2439 aa2.48□□□□□ -2.01
NEDD4-209ENST00000508871 DMXL1Q9Y485 3027 aa2.48□□□□□ -2.01
NEDD4-209ENST00000508871 LINC00315P59091 139 aa2.48□□□□□ -2.01
NEDD4-209ENST00000508871 LINC00612Q8N6U2 182 aa2.48□□□□□ -2.01
NEDD4-209ENST00000508871 Q8N9P0 234 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-209ENST00000508871 COL6A6A6NMZ7 2263 aa2.48□□□□□ -2.01
NEDD4-209ENST00000508871 TNCP24821 2201 aa2.48□□□□□ -2.01
NEDD4-209ENST00000508871 HRES1P13985 223 aa2.48□□□□□ -2.01
NEDD4-209ENST00000508871 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-209ENST00000508871 KRTAP10-3P60369 221 aa2.47□□□□□ -2.01
NEDD4-209ENST00000508871 POLR2KP53803 58 aaKnown RBP2.47□□□□□ -2.01
NEDD4-209ENST00000508871 DEFB136Q30KP8 78 aa2.47□□□□□ -2.01
NEDD4-209ENST00000508871 KRTAP24-1Q3LI83 254 aa2.47□□□□□ -2.01
NEDD4-209ENST00000508871 KPRPQ5T749 579 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-209ENST00000508871 A0A1B0GU33 70 aa2.47□□□□□ -2.01
NEDD4-209ENST00000508871 M0QY20 66 aa2.47□□□□□ -2.01
NEDD4-209ENST00000508871 SPINK13Q1W4C9 94 aa2.47□□□□□ -2.01
NEDD4-209ENST00000508871 SPTBN2O15020 2390 aa2.47□□□□□ -2.01
NEDD4-209ENST00000508871 NCOR1O75376 2440 aa2.47□□□□□ -2.01
NEDD4-209ENST00000508871 A0A0G2JQZ4 141 aa2.47□□□□□ -2.01
NEDD4-209ENST00000508871 CFAP47Q6ZTR5 3102 aa2.47□□□□□ -2.01
NEDD4-209ENST00000508871 FAM186AA6NE01 2351 aa2.46□□□□□ -2.01
NEDD4-209ENST00000508871 CACNA1HO95180 2353 aa2.46□□□□□ -2.02
NEDD4-209ENST00000508871 IGKV3OR2-268A0A0C4DH90 116 aa2.46□□□□□ -2.02
NEDD4-209ENST00000508871 AMELXQ99217 191 aa2.46□□□□□ -2.02
NEDD4-209ENST00000508871 LINC01600Q96MT4 127 aa2.45□□□□□ -2.02
NEDD4-209ENST00000508871 H0YGX0 51 aa2.45□□□□□ -2.02
NEDD4-209ENST00000508871 SLPIP03973 132 aa2.45□□□□□ -2.02
NEDD4-209ENST00000508871 CACNA1AO00555 2505 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms