RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 IGKV2D-26A0A0A0MRZ7 120 aa10.31□□□□□ -0.76
SKP2-204ENST00000508514 C3orf22Q8N5N4 141 aa10.31□□□□□ -0.76
SKP2-204ENST00000508514 HBDP02042 147 aa10.3□□□□□ -0.76
SKP2-204ENST00000508514 RPL24P83731 157 aaKnown RBP10.3□□□□□ -0.76
SKP2-204ENST00000508514 RHEBQ15382 184 aa10.3□□□□□ -0.76
SKP2-204ENST00000508514 BAGE3Q86Y29 109 aa10.3□□□□□ -0.76
SKP2-204ENST00000508514 TRAPPC1Q9Y5R8 145 aa10.29□□□□□ -0.76
SKP2-204ENST00000508514 TMEM170BQ5T4T1 132 aa10.28□□□□□ -0.76
SKP2-204ENST00000508514 A0A0U1RQV1 116 aa10.27□□□□□ -0.77
SKP2-204ENST00000508514 TPRXLQ17RH7 258 aa10.27□□□□□ -0.77
SKP2-204ENST00000508514 CBLN2Q8IUK8 224 aa10.27□□□□□ -0.77
SKP2-204ENST00000508514 KRTAP9-2Q9BYQ4 174 aa10.27□□□□□ -0.77
SKP2-204ENST00000508514 IGLV7-46A0A075B6I9 117 aa10.26□□□□□ -0.77
SKP2-204ENST00000508514 A0A0U1RRA0 63 aa10.24□□□□□ -0.77
SKP2-204ENST00000508514 TMEM223A0PJW6 202 aa10.24□□□□□ -0.77
SKP2-204ENST00000508514 LINC00158P58513 81 aa10.24□□□□□ -0.77
SKP2-204ENST00000508514 CTAG1AP78358 180 aa10.24□□□□□ -0.77
SKP2-204ENST00000508514 SPRR4Q96PI1 79 aa10.24□□□□□ -0.77
SKP2-204ENST00000508514 HIGD2AQ9BW72 106 aa10.24□□□□□ -0.77
SKP2-204ENST00000508514 CHTOPQ9Y3Y2 248 aaKnown RBP10.24□□□□□ -0.77
SKP2-204ENST00000508514 CDIP1Q9H305 208 aa10.23□□□□□ -0.77
SKP2-204ENST00000508514 SFTA2Q6UW10 78 aa10.22□□□□□ -0.77
SKP2-204ENST00000508514 SMIM13P0DJ93 91 aa10.2□□□□□ -0.78
SKP2-204ENST00000508514 PPDPFQ9H3Y8 114 aa10.2□□□□□ -0.78
SKP2-204ENST00000508514 KRTAP4-16G5E9R7 235 aaPredicted RBP10.19□□□□□ -0.78
SKP2-204ENST00000508514 SPRR1AP35321 89 aa10.19□□□□□ -0.78
SKP2-204ENST00000508514 YPEL4Q96NS1 127 aa10.19□□□□□ -0.78
SKP2-204ENST00000508514 TRAV12-1A0A0B4J245 112 aa10.18□□□□□ -0.78
SKP2-204ENST00000508514 DAND5Q8N907 189 aa10.17□□□□□ -0.78
SKP2-204ENST00000508514 IFI27L1Q96BM0 104 aa10.17□□□□□ -0.78
SKP2-204ENST00000508514 APOC3P02656 99 aa10.16□□□□□ -0.78
SKP2-204ENST00000508514 SPAG11AQ6PDA7 123 aa10.16□□□□□ -0.78
SKP2-204ENST00000508514 BOD1L2Q8IYS8 172 aa10.16□□□□□ -0.78
SKP2-204ENST00000508514 KCNQ1DNQ9H478 68 aa10.16□□□□□ -0.78
SKP2-204ENST00000508514 PRYO14603 147 aa10.15□□□□□ -0.78
SKP2-204ENST00000508514 NCR3O14931 201 aa10.15□□□□□ -0.78
SKP2-204ENST00000508514 MIR7-3HGQ8N6C7 128 aa10.15□□□□□ -0.78
SKP2-204ENST00000508514 LINC00337Q8N6G1 96 aa10.15□□□□□ -0.78
SKP2-204ENST00000508514 SMCR5Q8TEV8 140 aa10.15□□□□□ -0.78
SKP2-204ENST00000508514 Q8NBF4 154 aa10.14□□□□□ -0.79
SKP2-204ENST00000508514 CHCHD1Q96BP2 118 aaKnown RBP10.14□□□□□ -0.79
SKP2-204ENST00000508514 TRBV10-3A0A0K0K1G6 114 aa10.12□□□□□ -0.79
SKP2-204ENST00000508514 KRTAP13-3Q3SY46 172 aa10.12□□□□□ -0.79
SKP2-204ENST00000508514 TSPEAR-AS2P59090 65 aa10.11□□□□□ -0.79
SKP2-204ENST00000508514 LINC00483Q53H64 154 aa10.11□□□□□ -0.79
SKP2-204ENST00000508514 MEIG1Q5JSS6 88 aa10.11□□□□□ -0.79
SKP2-204ENST00000508514 FAM19A2Q8N3H0 131 aa10.11□□□□□ -0.79
SKP2-204ENST00000508514 ZNF706Q9Y5V0 76 aaPredicted RBP10.11□□□□□ -0.79
SKP2-204ENST00000508514 ERC2-IT1O76042 136 aa10.1□□□□□ -0.79
SKP2-204ENST00000508514 SNAPINO95295 136 aa10.1□□□□□ -0.79
SKP2-204ENST00000508514 HERV-K104P63124 156 aa10.1□□□□□ -0.79
SKP2-204ENST00000508514 FP248Q71RG6 208 aaPredicted RBP10.1□□□□□ -0.79
SKP2-204ENST00000508514 NDUFA12Q9UI09 145 aa10.1□□□□□ -0.79
SKP2-204ENST00000508514 ATP6V1G1O75348 118 aa10.09□□□□□ -0.79
SKP2-204ENST00000508514 SVBPQ8N300 66 aa10.09□□□□□ -0.79
SKP2-204ENST00000508514 B5MCH6 92 aa10.08□□□□□ -0.8
SKP2-204ENST00000508514 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
SKP2-204ENST00000508514 KRTAP4-1Q9BYQ7 146 aa10.08□□□□□ -0.8
SKP2-204ENST00000508514 LOC107984156A0A0G2JMH3 177 aa10.07□□□□□ -0.8
SKP2-204ENST00000508514 ETDCA0A1B0GVM5 59 aa10.07□□□□□ -0.8
SKP2-204ENST00000508514 ARL17AQ8IVW1 177 aa10.07□□□□□ -0.8
SKP2-204ENST00000508514 LINC00310P59036 64 aa10.06□□□□□ -0.8
SKP2-204ENST00000508514 MYMXA0A1B0GTQ4 84 aa10.05□□□□□ -0.8
SKP2-204ENST00000508514 SPINK1P00995 79 aa10.05□□□□□ -0.8
SKP2-204ENST00000508514 GAGE2AQ6NT46 116 aa10.05□□□□□ -0.8
SKP2-204ENST00000508514 Q9BRP9 147 aa10.05□□□□□ -0.8
SKP2-204ENST00000508514 LINC00587B1AMM8 73 aa10.04□□□□□ -0.8
SKP2-204ENST00000508514 ASB16-AS1Q495Z4 193 aa10.04□□□□□ -0.8
SKP2-204ENST00000508514 H0Y8G0 127 aa10.03□□□□□ -0.8
SKP2-204ENST00000508514 HSBP1O75506 76 aa10.03□□□□□ -0.8
SKP2-204ENST00000508514 LEPROTO15243 131 aa10.02□□□□□ -0.81
SKP2-204ENST00000508514 MOBPQ13875 183 aa10.02□□□□□ -0.81
SKP2-204ENST00000508514 NDUFA5Q16718 116 aa10.02□□□□□ -0.81
SKP2-204ENST00000508514 EIF4EBP3O60516 100 aaPredicted RBP10.01□□□□□ -0.81
SKP2-204ENST00000508514 DDTP30046 118 aa10.01□□□□□ -0.81
SKP2-204ENST00000508514 Q8N377 158 aa10.01□□□□□ -0.81
SKP2-204ENST00000508514 MAP1LC3CQ9BXW4 147 aa10.01□□□□□ -0.81
SKP2-204ENST00000508514 IGLV9-49A0A0B4J1Y8 123 aa10□□□□□ -0.81
SKP2-204ENST00000508514 TRBV10-2A0A0K0K1G8 114 aa10□□□□□ -0.81
SKP2-204ENST00000508514 SERF1AO75920 110 aa9.99□□□□□ -0.81
SKP2-204ENST00000508514 TRGC2P03986 189 aa9.99□□□□□ -0.81
SKP2-204ENST00000508514 Q6ZRX8 168 aa9.99□□□□□ -0.81
SKP2-204ENST00000508514 SSBP3-AS1Q7Z2R9 100 aa9.99□□□□□ -0.81
SKP2-204ENST00000508514 J3QQQ9 107 aa9.98□□□□□ -0.81
SKP2-204ENST00000508514 LEPROTL1O95214 131 aa9.98□□□□□ -0.81
SKP2-204ENST00000508514 IGLV6-57P01721 117 aa9.98□□□□□ -0.81
SKP2-204ENST00000508514 SOSTDC1Q6X4U4 206 aa9.98□□□□□ -0.81
SKP2-204ENST00000508514 PMCHL2Q9BQD1 86 aa9.98□□□□□ -0.81
SKP2-204ENST00000508514 KRTAP9-6A0A140TA67 174 aa9.97□□□□□ -0.81
SKP2-204ENST00000508514 RPS29P62273 56 aaKnown RBP9.97□□□□□ -0.81
SKP2-204ENST00000508514 SPANXB1Q9NS25 103 aaPredicted RBP9.96□□□□□ -0.82
SKP2-204ENST00000508514 PLNP26678 52 aa9.95□□□□□ -0.82
SKP2-204ENST00000508514 ADAMTSL4-AS1Q5T5F5 129 aa9.95□□□□□ -0.82
SKP2-204ENST00000508514 NDUFC2O95298 119 aa9.94□□□□□ -0.82
SKP2-204ENST00000508514 S100A12P80511 92 aa9.94□□□□□ -0.82
SKP2-204ENST00000508514 DPM2O94777 84 aa9.93□□□□□ -0.82
SKP2-204ENST00000508514 FABP4P15090 132 aa9.93□□□□□ -0.82
SKP2-204ENST00000508514 ST20-AS1Q8NBB2 130 aa9.93□□□□□ -0.82
SKP2-204ENST00000508514 NMUP48645 174 aa9.92□□□□□ -0.82
SKP2-204ENST00000508514 TRAV23DV6A0A075B6W5 121 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms