RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 IGKV2D-28P01615 120 aa7.64□□□□□ -1.19
HMGCS1-205ENST00000508319 PFN2P35080 140 aa7.64□□□□□ -1.19
HMGCS1-205ENST00000508319 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
HMGCS1-205ENST00000508319 HBDP02042 147 aa7.63□□□□□ -1.19
HMGCS1-205ENST00000508319 VPREB1P12018 145 aa7.63□□□□□ -1.19
HMGCS1-205ENST00000508319 UBE2AP49459 152 aa7.63□□□□□ -1.19
HMGCS1-205ENST00000508319 NDUFA6P56556 154 aa7.63□□□□□ -1.19
HMGCS1-205ENST00000508319 PMCHL1Q16048 86 aa7.63□□□□□ -1.19
HMGCS1-205ENST00000508319 TYMSOSQ8TAI1 123 aa7.63□□□□□ -1.19
HMGCS1-205ENST00000508319 SND1-IT1Q9HBX3 110 aa7.63□□□□□ -1.19
HMGCS1-205ENST00000508319 ANAPC11Q9NYG5 84 aa7.63□□□□□ -1.19
HMGCS1-205ENST00000508319 ERG28Q9UKR5 140 aa7.63□□□□□ -1.19
HMGCS1-205ENST00000508319 LINC00614P0C842 121 aa7.62□□□□□ -1.19
HMGCS1-205ENST00000508319 TRAPPC1Q9Y5R8 145 aa7.62□□□□□ -1.19
HMGCS1-205ENST00000508319 KRTAP4-8A0A0G2JLE6 195 aa7.61□□□□□ -1.19
HMGCS1-205ENST00000508319 C11orf86A6NJI1 115 aa7.61□□□□□ -1.19
HMGCS1-205ENST00000508319 H3BS24 57 aa7.61□□□□□ -1.19
HMGCS1-205ENST00000508319 PRLHP81277 87 aa7.61□□□□□ -1.19
HMGCS1-205ENST00000508319 COX17Q14061 63 aa7.61□□□□□ -1.19
HMGCS1-205ENST00000508319 Q8NDZ9 215 aa7.61□□□□□ -1.19
HMGCS1-205ENST00000508319 TMEM238C9JI98 176 aa7.6□□□□□ -1.19
HMGCS1-205ENST00000508319 FAM229BQ4G0N7 80 aa7.6□□□□□ -1.19
HMGCS1-205ENST00000508319 ZNF625Q96I27 306 aaPredicted RBP7.6□□□□□ -1.19
HMGCS1-205ENST00000508319 TMEM126AQ9H061 195 aa7.6□□□□□ -1.19
HMGCS1-205ENST00000508319 M0R378 163 aa7.58□□□□□ -1.2
HMGCS1-205ENST00000508319 RPL24P83731 157 aaKnown RBP7.58□□□□□ -1.2
HMGCS1-205ENST00000508319 TMEM170BQ5T4T1 132 aa7.58□□□□□ -1.2
HMGCS1-205ENST00000508319 SFTA2Q6UW10 78 aa7.58□□□□□ -1.2
HMGCS1-205ENST00000508319 FAM19A1Q7Z5A9 133 aa7.58□□□□□ -1.2
HMGCS1-205ENST00000508319 BAGE3Q86Y29 109 aa7.58□□□□□ -1.2
HMGCS1-205ENST00000508319 LINC00304Q8N9R0 145 aa7.56□□□□□ -1.2
HMGCS1-205ENST00000508319 CHTOPQ9Y3Y2 248 aaKnown RBP7.56□□□□□ -1.2
HMGCS1-205ENST00000508319 APOC3P02656 99 aa7.55□□□□□ -1.2
HMGCS1-205ENST00000508319 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
HMGCS1-205ENST00000508319 RETNLBQ9BQ08 111 aa7.55□□□□□ -1.2
HMGCS1-205ENST00000508319 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
HMGCS1-205ENST00000508319 TMEM223A0PJW6 202 aa7.54□□□□□ -1.2
HMGCS1-205ENST00000508319 SVBPQ8N300 66 aa7.54□□□□□ -1.2
HMGCS1-205ENST00000508319 PLEKHB2Q96CS7 222 aa7.54□□□□□ -1.2
HMGCS1-205ENST00000508319 TRAV12-1A0A0B4J245 112 aa7.53□□□□□ -1.2
HMGCS1-205ENST00000508319 SNAPINO95295 136 aa7.53□□□□□ -1.2
HMGCS1-205ENST00000508319 YPEL4Q96NS1 127 aa7.53□□□□□ -1.2
HMGCS1-205ENST00000508319 LINC00158P58513 81 aa7.52□□□□□ -1.21
HMGCS1-205ENST00000508319 CBLN2Q8IUK8 224 aa7.52□□□□□ -1.21
HMGCS1-205ENST00000508319 C3orf22Q8N5N4 141 aa7.52□□□□□ -1.21
HMGCS1-205ENST00000508319 IFI27L1Q96BM0 104 aa7.52□□□□□ -1.21
HMGCS1-205ENST00000508319 CHCHD1Q96BP2 118 aaKnown RBP7.52□□□□□ -1.21
HMGCS1-205ENST00000508319 MUC17Q685J3 4493 aa7.51□□□□□ -1.21
HMGCS1-205ENST00000508319 A0A0U1RRA0 63 aa7.51□□□□□ -1.21
HMGCS1-205ENST00000508319 NDUFA5Q16718 116 aa7.51□□□□□ -1.21
HMGCS1-205ENST00000508319 HIGD2AQ9BW72 106 aa7.51□□□□□ -1.21
HMGCS1-205ENST00000508319 SMIM13P0DJ93 91 aa7.49□□□□□ -1.21
HMGCS1-205ENST00000508319 CTAG1AP78358 180 aa7.49□□□□□ -1.21
HMGCS1-205ENST00000508319 SPRR4Q96PI1 79 aa7.49□□□□□ -1.21
HMGCS1-205ENST00000508319 TPRXLQ17RH7 258 aa7.48□□□□□ -1.21
HMGCS1-205ENST00000508319 A0A0U1RQV1 116 aa7.47□□□□□ -1.21
HMGCS1-205ENST00000508319 PRYO14603 147 aa7.47□□□□□ -1.21
HMGCS1-205ENST00000508319 SPRR1AP35321 89 aa7.47□□□□□ -1.21
HMGCS1-205ENST00000508319 MEIG1Q5JSS6 88 aa7.47□□□□□ -1.21
HMGCS1-205ENST00000508319 BOD1L2Q8IYS8 172 aa7.47□□□□□ -1.21
HMGCS1-205ENST00000508319 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
HMGCS1-205ENST00000508319 NCR3O14931 201 aa7.46□□□□□ -1.22
HMGCS1-205ENST00000508319 HERV-K104P63124 156 aa7.46□□□□□ -1.22
HMGCS1-205ENST00000508319 FAM19A2Q8N3H0 131 aa7.46□□□□□ -1.22
HMGCS1-205ENST00000508319 NDUFA12Q9UI09 145 aa7.46□□□□□ -1.22
HMGCS1-205ENST00000508319 FAT4Q6V0I7 4981 aa7.46□□□□□ -1.22
HMGCS1-205ENST00000508319 IGLV7-46A0A075B6I9 117 aa7.45□□□□□ -1.22
HMGCS1-205ENST00000508319 KRTAP4-16G5E9R7 235 aaPredicted RBP7.45□□□□□ -1.22
HMGCS1-205ENST00000508319 ATP6V1G1O75348 118 aa7.45□□□□□ -1.22
HMGCS1-205ENST00000508319 HSBP1O75506 76 aa7.45□□□□□ -1.22
HMGCS1-205ENST00000508319 LINC00337Q8N6G1 96 aa7.45□□□□□ -1.22
HMGCS1-205ENST00000508319 KCNQ1DNQ9H478 68 aa7.45□□□□□ -1.22
HMGCS1-205ENST00000508319 ZNF706Q9Y5V0 76 aaPredicted RBP7.45□□□□□ -1.22
HMGCS1-205ENST00000508319 LINC00310P59036 64 aa7.44□□□□□ -1.22
HMGCS1-205ENST00000508319 TSPEAR-AS2P59090 65 aa7.44□□□□□ -1.22
HMGCS1-205ENST00000508319 TRBV10-3A0A0K0K1G6 114 aa7.43□□□□□ -1.22
HMGCS1-205ENST00000508319 MYMXA0A1B0GTQ4 84 aa7.42□□□□□ -1.22
HMGCS1-205ENST00000508319 LINC00587B1AMM8 73 aa7.42□□□□□ -1.22
HMGCS1-205ENST00000508319 H0Y8G0 127 aa7.42□□□□□ -1.22
HMGCS1-205ENST00000508319 SPAG11AQ6PDA7 123 aa7.42□□□□□ -1.22
HMGCS1-205ENST00000508319 SMCR5Q8TEV8 140 aa7.42□□□□□ -1.22
HMGCS1-205ENST00000508319 PPDPFQ9H3Y8 114 aa7.42□□□□□ -1.22
HMGCS1-205ENST00000508319 ETDCA0A1B0GVM5 59 aa7.41□□□□□ -1.22
HMGCS1-205ENST00000508319 DAND5Q8N907 189 aa7.41□□□□□ -1.22
HMGCS1-205ENST00000508319 Q8NBF4 154 aa7.41□□□□□ -1.22
HMGCS1-205ENST00000508319 MAP1LC3CQ9BXW4 147 aa7.41□□□□□ -1.22
HMGCS1-205ENST00000508319 LOC107984156A0A0G2JMH3 177 aa7.4□□□□□ -1.22
HMGCS1-205ENST00000508319 LEPROTO15243 131 aa7.4□□□□□ -1.22
HMGCS1-205ENST00000508319 SERF1AO75920 110 aa7.4□□□□□ -1.22
HMGCS1-205ENST00000508319 LEPROTL1O95214 131 aa7.4□□□□□ -1.22
HMGCS1-205ENST00000508319 TRGC2P03986 189 aa7.4□□□□□ -1.22
HMGCS1-205ENST00000508319 LINC00483Q53H64 154 aa7.4□□□□□ -1.22
HMGCS1-205ENST00000508319 ARL17AQ8IVW1 177 aa7.4□□□□□ -1.22
HMGCS1-205ENST00000508319 PLNP26678 52 aa7.39□□□□□ -1.23
HMGCS1-205ENST00000508319 TRBV10-2A0A0K0K1G8 114 aa7.38□□□□□ -1.23
HMGCS1-205ENST00000508319 B5MCH6 92 aa7.38□□□□□ -1.23
HMGCS1-205ENST00000508319 J3QQQ9 107 aa7.38□□□□□ -1.23
HMGCS1-205ENST00000508319 FP248Q71RG6 208 aaPredicted RBP7.38□□□□□ -1.23
HMGCS1-205ENST00000508319 ERC2-IT1O76042 136 aa7.37□□□□□ -1.23
HMGCS1-205ENST00000508319 DDTP30046 118 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms