RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 DEFB1P60022 68 aa3.46□□□□□ -1.86
COL6A4P1-204ENST00000508169 SPINK13Q1W4C9 94 aa3.46□□□□□ -1.86
COL6A4P1-204ENST00000508169 Q6ZQT7 251 aa3.46□□□□□ -1.86
COL6A4P1-204ENST00000508169 ATOH7Q8N100 152 aa3.46□□□□□ -1.86
COL6A4P1-204ENST00000508169 ZNF706Q9Y5V0 76 aaPredicted RBP3.46□□□□□ -1.86
COL6A4P1-204ENST00000508169 CUBNO60494 3623 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 IGHV1-24A0A0C4DH33 117 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 TRBV27A0A0K0K1C4 114 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 SYS1-DBNDD2H3BUS1 97 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 H3BUT2 72 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 LEPROTL1O95214 131 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 APOMO95445 188 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 C3orf79P0CE67 100 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 FCER1GP30273 86 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 IFI27P40305 119 aaPredicted RBP3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 RRN3P1Q2M238 152 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 LINC00526Q96FQ7 95 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 DPH3Q96FX2 82 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 RBM12B-AS1Q9P1G2 102 aa3.45□□□□□ -1.86
COL6A4P1-204ENST00000508169 TRAV12-2A0A075B6T6 113 aa3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 M0QY20 66 aa3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 TRACP01848 142 aa3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 HBDP02042 147 aa3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 ATP5G1P05496 136 aa3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 PRB4P10163 310 aaPredicted RBP3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 KRTDAPP60985 99 aa3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 LINC01545Q5VT33 79 aa3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 FAM19A2Q8N3H0 131 aa3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 TMEM263Q8WUH6 116 aaKnown RBP3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 BRK1Q8WUW1 75 aa3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 VWFP04275 2813 aa3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 MAST4O15021 2626 aa3.44□□□□□ -1.86
COL6A4P1-204ENST00000508169 TRAV13-1A0A0B4J241 112 aa3.43□□□□□ -1.86
COL6A4P1-204ENST00000508169 IGLL5B9A064 214 aa3.43□□□□□ -1.86
COL6A4P1-204ENST00000508169 IGHV3-53P01767 116 aa3.43□□□□□ -1.86
COL6A4P1-204ENST00000508169 P0DMU3 169 aa3.43□□□□□ -1.86
COL6A4P1-204ENST00000508169 FAM231AP0DMU4 169 aa3.43□□□□□ -1.86
COL6A4P1-204ENST00000508169 FAM231CP0DMU5 169 aa3.43□□□□□ -1.86
COL6A4P1-204ENST00000508169 LGALS9CQ6DKI2 356 aa3.43□□□□□ -1.86
COL6A4P1-204ENST00000508169 LINC00304Q8N9R0 145 aa3.43□□□□□ -1.86
COL6A4P1-204ENST00000508169 PPDPFLQ8WWR9 84 aa3.43□□□□□ -1.86
COL6A4P1-204ENST00000508169 SMIM2Q9BVW6 85 aa3.43□□□□□ -1.86
COL6A4P1-204ENST00000508169 COL6A5A8TX70 2615 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 TRAV12-1A0A0B4J245 112 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 TRAV4A0A0B4J268 109 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 TRBV10-1A0A0K0K1A3 114 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 H3BMG7 143 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 INAFM2P0DMQ5 153 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 SCGB1C2P0DMR2 95 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 RHOHQ15669 191 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 CFAP126Q5VTH2 177 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 COPS9Q8WXC6 57 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 TOMM6Q96B49 74 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 STAB1Q9NY15 2570 aa3.42□□□□□ -1.86
COL6A4P1-204ENST00000508169 SDHAF1A6NFY7 115 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 I3L3M4 83 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 CRYGAP11844 174 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 WFDC2Q14508 124 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 ETDBQ3ZM63 59 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 SCGB1D4Q6XE38 83 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 Q6ZRU5 148 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 PRR15Q8IV56 129 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 C3orf56Q8N813 242 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 IFI27L1Q96BM0 104 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 TMEM141Q96I45 108 aa3.41□□□□□ -1.86
COL6A4P1-204ENST00000508169 TRBV6-4A0A1B0GX49 114 aa3.4□□□□□ -1.87
COL6A4P1-204ENST00000508169 HHLA3Q9XRX5 114 aa3.4□□□□□ -1.87
COL6A4P1-204ENST00000508169 TIMM8BQ9Y5J9 83 aaPredicted RBP3.4□□□□□ -1.87
COL6A4P1-204ENST00000508169 TRBV7-3A0A075B6L6 115 aa3.39□□□□□ -1.87
COL6A4P1-204ENST00000508169 C8orf87E5RJ46 101 aa3.39□□□□□ -1.87
COL6A4P1-204ENST00000508169 SMIM13P0DJ93 91 aa3.39□□□□□ -1.87
COL6A4P1-204ENST00000508169 FXYD7P58549 80 aa3.39□□□□□ -1.87
COL6A4P1-204ENST00000508169 DAD1P61803 113 aa3.39□□□□□ -1.87
COL6A4P1-204ENST00000508169 RPL39LQ96EH5 51 aaKnown RBP3.39□□□□□ -1.87
COL6A4P1-204ENST00000508169 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
COL6A4P1-204ENST00000508169 TRAV8-3A0A0A6YYJ7 113 aa3.38□□□□□ -1.87
COL6A4P1-204ENST00000508169 IGKV2-24A0A0C4DH68 120 aa3.38□□□□□ -1.87
COL6A4P1-204ENST00000508169 K7ERS5 55 aa3.38□□□□□ -1.87
COL6A4P1-204ENST00000508169 MGPP08493 103 aa3.38□□□□□ -1.87
COL6A4P1-204ENST00000508169 MIFP14174 115 aa3.38□□□□□ -1.87
COL6A4P1-204ENST00000508169 COX7CP15954 63 aa3.38□□□□□ -1.87
COL6A4P1-204ENST00000508169 PLNP26678 52 aa3.38□□□□□ -1.87
COL6A4P1-204ENST00000508169 ZNF56Q15929 161 aa3.38□□□□□ -1.87
COL6A4P1-204ENST00000508169 SCGB3A1Q96QR1 104 aa3.38□□□□□ -1.87
COL6A4P1-204ENST00000508169 SERP1Q9Y6X1 66 aa3.38□□□□□ -1.87
COL6A4P1-204ENST00000508169 FBN1P35555 2871 aaKnown RBP3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 F8VRH5 84 aa3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 IGKCP01834 107 aa3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 COX8AP10176 69 aa3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 HTN1P15515 57 aa3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 NPC2P61916 151 aa3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 MRPS36P82909 103 aaKnown RBP3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 FAM74A4Q5TZK3 123 aa3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 ADM2Q7Z4H4 148 aa3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 AMELXQ99217 191 aa3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 IMUPQ9GZP8 106 aa3.37□□□□□ -1.87
COL6A4P1-204ENST00000508169 NOP10Q9NPE3 64 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms