RNA–Protein interactions for RNA: ENST00000508086.1

CCSER1-206, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-206ENST00000508086 PPRC1Q5VV67 1664 aaKnown RBP0.75□□□□□ -2.29
CCSER1-206ENST00000508086 PTPRZ1P23471 2315 aaPredicted RBP0.74□□□□□ -2.29
CCSER1-206ENST00000508086 A0A1B0GUT8 65 aa0.74□□□□□ -2.29
CCSER1-206ENST00000508086 CEBPZOSA8MTT3 80 aa0.74□□□□□ -2.29
CCSER1-206ENST00000508086 ZNF831Q5JPB2 1677 aa0.74□□□□□ -2.29
CCSER1-206ENST00000508086 ABCC1P33527 1531 aa0.74□□□□□ -2.29
CCSER1-206ENST00000508086 TSC2P49815 1807 aa0.73□□□□□ -2.29
CCSER1-206ENST00000508086 RGPD8O14715 1765 aaPredicted RBP0.73□□□□□ -2.29
CCSER1-206ENST00000508086 RGPD5Q99666 1765 aa0.73□□□□□ -2.29
CCSER1-206ENST00000508086 SCN11AQ9UI33 1791 aa0.73□□□□□ -2.29
CCSER1-206ENST00000508086 POLR1AO95602 1720 aaPredicted RBP0.73□□□□□ -2.29
CCSER1-206ENST00000508086 FMN2Q9NZ56 1722 aa0.73□□□□□ -2.29
CCSER1-206ENST00000508086 COX6B1P14854 86 aa0.73□□□□□ -2.29
CCSER1-206ENST00000508086 CEP170BQ9Y4F5 1589 aaPredicted RBP0.73□□□□□ -2.29
CCSER1-206ENST00000508086 NKTRP30414 1462 aaKnown RBP0.73□□□□□ -2.29
CCSER1-206ENST00000508086 COL14A1Q05707 1796 aaKnown RBP0.73□□□□□ -2.29
CCSER1-206ENST00000508086 USP32Q8NFA0 1604 aa0.72□□□□□ -2.29
CCSER1-206ENST00000508086 ABCA8O94911 1581 aa0.72□□□□□ -2.29
CCSER1-206ENST00000508086 Q5BKY6 102 aa0.72□□□□□ -2.29
CCSER1-206ENST00000508086 DEFB121Q5J5C9 76 aa0.72□□□□□ -2.29
CCSER1-206ENST00000508086 BVES-AS1Q5T3Y7 98 aa0.72□□□□□ -2.29
CCSER1-206ENST00000508086 USMG5Q96IX5 58 aa0.72□□□□□ -2.29
CCSER1-206ENST00000508086 LRRC7Q96NW7 1537 aa0.72□□□□□ -2.29
CCSER1-206ENST00000508086 NCOA2Q15596 1464 aa0.72□□□□□ -2.29
CCSER1-206ENST00000508086 LRRIQ1Q96JM4 1722 aa0.72□□□□□ -2.29
CCSER1-206ENST00000508086 PIK3C2BO00750 1634 aa0.71□□□□□ -2.3
CCSER1-206ENST00000508086 MAGI3Q5TCQ9 1506 aa0.71□□□□□ -2.3
CCSER1-206ENST00000508086 URB2Q14146 1524 aaKnown RBP0.7□□□□□ -2.3
CCSER1-206ENST00000508086 FXYD6-FXYD2A0A087WZ82 144 aa0.7□□□□□ -2.3
CCSER1-206ENST00000508086 DEFB112Q30KQ8 113 aa0.7□□□□□ -2.3
CCSER1-206ENST00000508086 CSMD3Q7Z407 3707 aa0.7□□□□□ -2.3
CCSER1-206ENST00000508086 TIAM2Q8IVF5 1701 aa0.69□□□□□ -2.3
CCSER1-206ENST00000508086 UBR3Q6ZT12 1888 aa0.69□□□□□ -2.3
CCSER1-206ENST00000508086 H3BUT2 72 aa0.68□□□□□ -2.3
CCSER1-206ENST00000508086 SPRR1AP35321 89 aa0.68□□□□□ -2.3
CCSER1-206ENST00000508086 PTPRQQ9UMZ3 2332 aa0.68□□□□□ -2.3
CCSER1-206ENST00000508086 ANKARQ7Z5J8 1434 aa0.67□□□□□ -2.3
CCSER1-206ENST00000508086 SPRR1BP22528 89 aa0.67□□□□□ -2.3
CCSER1-206ENST00000508086 BCORQ6W2J9 1755 aa0.65□□□□□ -2.3
CCSER1-206ENST00000508086 DOT1LQ8TEK3 1739 aa0.65□□□□□ -2.31
CCSER1-206ENST00000508086 TRAV21A0A0B4J279 112 aa0.65□□□□□ -2.31
CCSER1-206ENST00000508086 COX8AP10176 69 aa0.65□□□□□ -2.31
CCSER1-206ENST00000508086 COX7BP24311 80 aa0.65□□□□□ -2.31
CCSER1-206ENST00000508086 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
CCSER1-206ENST00000508086 CRIPTQ9P021 101 aa0.65□□□□□ -2.31
CCSER1-206ENST00000508086 CCDC88BA6NC98 1476 aa0.65□□□□□ -2.31
CCSER1-206ENST00000508086 ARFGEF2Q9Y6D5 1785 aa0.65□□□□□ -2.31
CCSER1-206ENST00000508086 SPTBN1Q01082 2364 aaKnown RBP0.64□□□□□ -2.31
CCSER1-206ENST00000508086 GVINP1Q7Z2Y8 2422 aa0.64□□□□□ -2.31
CCSER1-206ENST00000508086 C18orf32Q8TCD1 76 aa0.64□□□□□ -2.31
CCSER1-206ENST00000508086 PREX1Q8TCU6 1659 aa0.64□□□□□ -2.31
CCSER1-206ENST00000508086 OTOGQ6ZRI0 2925 aa0.64□□□□□ -2.31
CCSER1-206ENST00000508086 SPTY2D1-AS1A0A0U1RR47 76 aa0.63□□□□□ -2.31
CCSER1-206ENST00000508086 NDUFB1O75438 58 aa0.63□□□□□ -2.31
CCSER1-206ENST00000508086 ATP5EP2Q5VTU8 51 aa0.63□□□□□ -2.31
CCSER1-206ENST00000508086 CD163L1Q9NR16 1453 aa0.62□□□□□ -2.31
CCSER1-206ENST00000508086 GAFA1Q96PS6 74 aa0.62□□□□□ -2.31
CCSER1-206ENST00000508086 VWFP04275 2813 aa0.62□□□□□ -2.31
CCSER1-206ENST00000508086 PKDREJQ9NTG1 2253 aa0.61□□□□□ -2.31
CCSER1-206ENST00000508086 CPSF4LA6NMK7 179 aaKnown RBP0.61□□□□□ -2.31
CCSER1-206ENST00000508086 I3L3M4 83 aa0.61□□□□□ -2.31
CCSER1-206ENST00000508086 SPINK1P00995 79 aa0.61□□□□□ -2.31
CCSER1-206ENST00000508086 AKAP6Q13023 2319 aa0.61□□□□□ -2.31
CCSER1-206ENST00000508086 USP24Q9UPU5 2620 aa0.6□□□□□ -2.31
CCSER1-206ENST00000508086 CFAP43Q8NDM7 1665 aa0.6□□□□□ -2.31
CCSER1-206ENST00000508086 ZFYVE26Q68DK2 2539 aa0.6□□□□□ -2.31
CCSER1-206ENST00000508086 DEFB109BQ30KR1 87 aa0.6□□□□□ -2.31
CCSER1-206ENST00000508086 MRPL34Q9BQ48 92 aaKnown RBP0.6□□□□□ -2.31
CCSER1-206ENST00000508086 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.59□□□□□ -2.31
CCSER1-206ENST00000508086 MYO5CQ9NQX4 1742 aa0.59□□□□□ -2.31
CCSER1-206ENST00000508086 CLIP1P30622 1438 aa0.59□□□□□ -2.31
CCSER1-206ENST00000508086 LCE6AA0A183 80 aa0.59□□□□□ -2.31
CCSER1-206ENST00000508086 CFDP00746 253 aaPredicted RBP0.59□□□□□ -2.31
CCSER1-206ENST00000508086 IGF2RP11717 2491 aa0.59□□□□□ -2.32
CCSER1-206ENST00000508086 TENM4Q6N022 2769 aa0.58□□□□□ -2.32
CCSER1-206ENST00000508086 LRP1Q07954 4544 aaKnown RBP0.58□□□□□ -2.32
CCSER1-206ENST00000508086 IQGAP3Q86VI3 1631 aa0.58□□□□□ -2.32
CCSER1-206ENST00000508086 DEFB105AQ8NG35 78 aa0.58□□□□□ -2.32
CCSER1-206ENST00000508086 NAV2Q8IVL1 2488 aa0.58□□□□□ -2.32
CCSER1-206ENST00000508086 NWD1Q149M9 1564 aa0.57□□□□□ -2.32
CCSER1-206ENST00000508086 CHD6Q8TD26 2715 aa0.57□□□□□ -2.32
CCSER1-206ENST00000508086 CCL22O00626 93 aa0.56□□□□□ -2.32
CCSER1-206ENST00000508086 IFI6P09912 130 aa0.56□□□□□ -2.32
CCSER1-206ENST00000508086 WFDC9Q8NEX5 89 aa0.56□□□□□ -2.32
CCSER1-206ENST00000508086 U3KQA8 63 aa0.56□□□□□ -2.32
CCSER1-206ENST00000508086 UNC79Q9P2D8 2635 aa0.56□□□□□ -2.32
CCSER1-206ENST00000508086 HMGA1P17096 107 aaKnown RBP0.55□□□□□ -2.32
CCSER1-206ENST00000508086 NESP48681 1621 aa0.55□□□□□ -2.32
CCSER1-206ENST00000508086 EIF2AK4Q9P2K8 1649 aaKnown RBP0.55□□□□□ -2.32
CCSER1-206ENST00000508086 UGGT2Q9NYU1 1516 aa0.54□□□□□ -2.32
CCSER1-206ENST00000508086 IFI27P40305 119 aaPredicted RBP0.54□□□□□ -2.32
CCSER1-206ENST00000508086 PARP4Q9UKK3 1724 aaKnown RBP0.54□□□□□ -2.32
CCSER1-206ENST00000508086 CNOT1A5YKK6 2376 aaKnown RBP0.54□□□□□ -2.32
CCSER1-206ENST00000508086 TNRC6CQ9HCJ0 1690 aaKnown RBP0.53□□□□□ -2.32
CCSER1-206ENST00000508086 UMAD1C9J7I0 102 aa0.53□□□□□ -2.32
CCSER1-206ENST00000508086 SMIM13P0DJ93 91 aa0.53□□□□□ -2.32
CCSER1-206ENST00000508086 RPL38P63173 70 aaKnown RBP0.53□□□□□ -2.32
CCSER1-206ENST00000508086 NCOR1O75376 2440 aa0.52□□□□□ -2.33
CCSER1-206ENST00000508086 SPINK4O60575 86 aa0.51□□□□□ -2.33
CCSER1-206ENST00000508086 REV3LO60673 3130 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms