RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 C7orf77A4D0Y5 90 aa2.34□□□□□ -2.03
CLDND1-212ENST00000506885 CYB5AP00167 134 aa2.34□□□□□ -2.03
CLDND1-212ENST00000506885 IGKV4-1P06312 121 aa2.34□□□□□ -2.03
CLDND1-212ENST00000506885 SNRPGP62308 76 aaKnown RBP2.34□□□□□ -2.03
CLDND1-212ENST00000506885 SSBP1Q04837 148 aaKnown RBP2.34□□□□□ -2.03
CLDND1-212ENST00000506885 SERP2Q8N6R1 65 aa2.34□□□□□ -2.03
CLDND1-212ENST00000506885 SMIM4Q8WVI0 70 aa2.34□□□□□ -2.03
CLDND1-212ENST00000506885 C20orf78Q9BR46 151 aa2.34□□□□□ -2.03
CLDND1-212ENST00000506885 ICE1Q9Y2F5 2266 aa2.34□□□□□ -2.04
CLDND1-212ENST00000506885 CENPEQ02224 2701 aa2.33□□□□□ -2.04
CLDND1-212ENST00000506885 SFTA3P0C7M3 94 aa2.33□□□□□ -2.04
CLDND1-212ENST00000506885 FXYD4P59646 89 aa2.33□□□□□ -2.04
CLDND1-212ENST00000506885 ZNF56Q15929 161 aa2.33□□□□□ -2.04
CLDND1-212ENST00000506885 FAM167A-AS1Q96KT0 104 aa2.33□□□□□ -2.04
CLDND1-212ENST00000506885 TRGV9Q99603 122 aa2.33□□□□□ -2.04
CLDND1-212ENST00000506885 OTOGQ6ZRI0 2925 aa2.33□□□□□ -2.04
CLDND1-212ENST00000506885 SPTBN1Q01082 2364 aaKnown RBP2.32□□□□□ -2.04
CLDND1-212ENST00000506885 PI4KAP42356 2102 aa2.32□□□□□ -2.04
CLDND1-212ENST00000506885 ARFGEF3Q5TH69 2177 aa2.32□□□□□ -2.04
CLDND1-212ENST00000506885 HCRTO43612 131 aa2.32□□□□□ -2.04
CLDND1-212ENST00000506885 SNRPFP62306 86 aaKnown RBP2.32□□□□□ -2.04
CLDND1-212ENST00000506885 TDRG1Q3Y452 100 aa2.32□□□□□ -2.04
CLDND1-212ENST00000506885 GDF5OSQ5U4N7 250 aa2.32□□□□□ -2.04
CLDND1-212ENST00000506885 TNRC6BQ9UPQ9 1833 aaKnown RBP2.32□□□□□ -2.04
CLDND1-212ENST00000506885 F8P00451 2351 aa2.32□□□□□ -2.04
CLDND1-212ENST00000506885 ANKRD36A6QL64 1941 aa2.32□□□□□ -2.04
CLDND1-212ENST00000506885 TLN1Q9Y490 2541 aaKnown RBP2.32□□□□□ -2.04
CLDND1-212ENST00000506885 ZFHX3Q15911 3703 aa2.32□□□□□ -2.04
CLDND1-212ENST00000506885 NBDYA0A0U1RRE5 68 aa2.31□□□□□ -2.04
CLDND1-212ENST00000506885 CCL3L1P16619 93 aa2.31□□□□□ -2.04
CLDND1-212ENST00000506885 ELOF1P60002 83 aaKnown RBP2.31□□□□□ -2.04
CLDND1-212ENST00000506885 UBE2D3P61077 147 aa2.31□□□□□ -2.04
CLDND1-212ENST00000506885 UBE2D2P62837 147 aa2.31□□□□□ -2.04
CLDND1-212ENST00000506885 FXYD3Q14802 87 aa2.31□□□□□ -2.04
CLDND1-212ENST00000506885 KRTAP13-4Q3LI77 160 aa2.31□□□□□ -2.04
CLDND1-212ENST00000506885 COX7B2Q8TF08 81 aa2.31□□□□□ -2.04
CLDND1-212ENST00000506885 S100A16Q96FQ6 103 aaKnown RBP2.31□□□□□ -2.04
CLDND1-212ENST00000506885 PRO1854Q9UHT4 67 aa2.31□□□□□ -2.04
CLDND1-212ENST00000506885 PDZD2O15018 2839 aa2.31□□□□□ -2.04
CLDND1-212ENST00000506885 CELSR2Q9HCU4 2923 aa2.31□□□□□ -2.04
CLDND1-212ENST00000506885 EXPH5Q8NEV8 1989 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 TRAV22A0A0B4J277 110 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 IGKV3D-7A0A0C4DH55 119 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 IGKV3OR2-268A0A0C4DH90 116 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 IGKV2-29A2NJV5 120 aaPredicted RBP2.3□□□□□ -2.04
CLDND1-212ENST00000506885 CHKB-CPT1BH3BT56 60 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 IGLC2P0DOY2 106 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 IGLC3P0DOY3 106 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 Q5VV11 94 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 UQCR10Q9UDW1 63 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 ESPL1Q14674 2120 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 KNTC1P50748 2209 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 NAV3Q8IVL0 2385 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 BOD1L1Q8NFC6 3051 aa2.3□□□□□ -2.04
CLDND1-212ENST00000506885 SPG11Q96JI7 2443 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 FXYD6-FXYD2A0A087WZ82 144 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 TRAV1-2A0A0B4J238 106 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 KANTRA0A1W2PQU2 76 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 IGLC7A0M8Q6 106 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 SYS1-DBNDD2H3BUS1 97 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 EDDM3BP56851 147 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 FAM74A4Q5TZK3 123 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 TOMM5Q8N4H5 51 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 Q8N6K4 173 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 C5orf56Q8N8D9 126 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 FXYD6Q9H0Q3 95 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 CYSTM1Q9H1C7 97 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 DYNLRB1Q9NP97 96 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 ABRACLQ9P1F3 81 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 LENEPQ9Y5L5 61 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 CRYBG3Q68DQ2 2970 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 NIPBLQ6KC79 2804 aaeCLIP2.29□□□□□ -2.04
CLDND1-212ENST00000506885 HIVEP1P15822 2718 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 MTORP42345 2549 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 MED13Q9UHV7 2174 aa2.29□□□□□ -2.04
CLDND1-212ENST00000506885 ADGRG4Q8IZF6 3080 aa2.28□□□□□ -2.04
CLDND1-212ENST00000506885 CELSR1Q9NYQ6 3014 aa2.28□□□□□ -2.04
CLDND1-212ENST00000506885 IGKV2-40A0A087WW87 121 aaPredicted RBP2.28□□□□□ -2.04
CLDND1-212ENST00000506885 PPP1R17O96001 155 aa2.28□□□□□ -2.04
CLDND1-212ENST00000506885 IGKV2D-40P01614 121 aaPredicted RBP2.28□□□□□ -2.04
CLDND1-212ENST00000506885 PPP1R1CQ8WVI7 109 aa2.28□□□□□ -2.04
CLDND1-212ENST00000506885 NXT2Q9NPJ8 142 aaKnown RBP2.28□□□□□ -2.04
CLDND1-212ENST00000506885 NDUFA4L2Q9NRX3 87 aa2.28□□□□□ -2.04
CLDND1-212ENST00000506885 RABAC1Q9UI14 185 aa2.28□□□□□ -2.04
CLDND1-212ENST00000506885 ANKHD1Q8IWZ3 2542 aaKnown RBP2.28□□□□□ -2.04
CLDND1-212ENST00000506885 NBASA2RRP1 2371 aa2.28□□□□□ -2.05
CLDND1-212ENST00000506885 SPENQ96T58 3664 aaKnown RBP2.28□□□□□ -2.05
CLDND1-212ENST00000506885 UMAD1C9J7I0 102 aa2.27□□□□□ -2.05
CLDND1-212ENST00000506885 COX6CP09669 75 aa2.27□□□□□ -2.05
CLDND1-212ENST00000506885 COX6B1P14854 86 aa2.27□□□□□ -2.05
CLDND1-212ENST00000506885 HMGA1P17096 107 aaKnown RBP2.27□□□□□ -2.05
CLDND1-212ENST00000506885 NMES1Q9C002 83 aa2.27□□□□□ -2.05
CLDND1-212ENST00000506885 CSMD1Q96PZ7 3565 aa2.27□□□□□ -2.05
CLDND1-212ENST00000506885 MED12Q93074 2177 aa2.26□□□□□ -2.05
CLDND1-212ENST00000506885 APCP25054 2843 aa2.26□□□□□ -2.05
CLDND1-212ENST00000506885 H7BZZ5 65 aa2.26□□□□□ -2.05
CLDND1-212ENST00000506885 SPAG11BQ08648 103 aa2.26□□□□□ -2.05
CLDND1-212ENST00000506885 DEFB109BQ30KR1 87 aa2.26□□□□□ -2.05
CLDND1-212ENST00000506885 SPAG11AQ6PDA7 123 aa2.26□□□□□ -2.05
CLDND1-212ENST00000506885 SFTA2Q6UW10 78 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms