RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 PLCE1Q9P212 2302 aa0.03□□□□□ -2.4
GYPB-207ENST00000506679 TRBV6-1A0A0K0K1D8 114 aa0.03□□□□□ -2.4
GYPB-207ENST00000506679 I3L2K1 104 aa0.03□□□□□ -2.4
GYPB-207ENST00000506679 S100A1P23297 94 aa0.03□□□□□ -2.4
GYPB-207ENST00000506679 SPRR4Q96PI1 79 aa0.03□□□□□ -2.4
GYPB-207ENST00000506679 SPHKAPQ2M3C7 1700 aa0.03□□□□□ -2.4
GYPB-207ENST00000506679 ANK3Q12955 4377 aaKnown RBP0.03□□□□□ -2.41
GYPB-207ENST00000506679 PZPP20742 1482 aa0.03□□□□□ -2.41
GYPB-207ENST00000506679 IQSEC2Q5JU85 1478 aa0.03□□□□□ -2.41
GYPB-207ENST00000506679 FRYQ5TBA9 3013 aa0.03□□□□□ -2.41
GYPB-207ENST00000506679 ARHGAP5Q13017 1502 aa0.03□□□□□ -2.41
GYPB-207ENST00000506679 EHBP1L1Q8N3D4 1523 aa0.03□□□□□ -2.41
GYPB-207ENST00000506679 PRUNE2Q8WUY3 3088 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 DNAH5Q8TE73 4624 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 DYNC2H1Q8NCM8 4307 aaKnown RBP0.02□□□□□ -2.41
GYPB-207ENST00000506679 CICQ96RK0 1608 aaPredicted RBP0.02□□□□□ -2.41
GYPB-207ENST00000506679 APOBP04114 4563 aaKnown RBP0.02□□□□□ -2.41
GYPB-207ENST00000506679 LINC00587B1AMM8 73 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 IGLC1P0CG04 106 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 KRTDAPP60985 99 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 UBE2D3P61077 147 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 UBE2D2P62837 147 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 Q0VG73 95 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 GTF2H5Q6ZYL4 71 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 MANBALQ9NQG1 85 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 PRO1854Q9UHT4 67 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 ARL2-SNX15V9GYD0 113 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 NCOA3Q9Y6Q9 1424 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 MRC2Q9UBG0 1479 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 DNAH9Q9NYC9 4486 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 SLIT1O75093 1534 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 ARHGEF12Q9NZN5 1544 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 CMYA5Q8N3K9 4069 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 PKHD1L1Q86WI1 4243 aa0.02□□□□□ -2.41
GYPB-207ENST00000506679 FAT2Q9NYQ8 4349 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 TRAPPC2P0DI81 140 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 TRAPPC2BP0DI82 140 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 SPRR1AP35321 89 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 UBA52P62987 128 aaKnown RBP0.01□□□□□ -2.41
GYPB-207ENST00000506679 FAM223AQ8IWN6 122 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 POLA1P09884 1462 aaPredicted RBP0.01□□□□□ -2.41
GYPB-207ENST00000506679 MAGI1Q96QZ7 1491 aaPredicted RBP0.01□□□□□ -2.41
GYPB-207ENST00000506679 TOP2BQ02880 1626 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 CHD1O14646 1710 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 NUP188Q5SRE5 1749 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 ABCA3Q99758 1704 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 TSC2P49815 1807 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 USF3Q68DE3 2245 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 PKDREJQ9NTG1 2253 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 WNK2Q9Y3S1 2297 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 ACACAQ13085 2346 aa0.01□□□□□ -2.41
GYPB-207ENST00000506679 ATMQ13315 3056 aa0□□□□□ -2.41
GYPB-207ENST00000506679 FXYD6-FXYD2A0A087WZ82 144 aa0□□□□□ -2.41
GYPB-207ENST00000506679 C20orf202A1L168 122 aa0□□□□□ -2.41
GYPB-207ENST00000506679 TMEM262E9PQX1 116 aa0□□□□□ -2.41
GYPB-207ENST00000506679 SAA2P0DJI9 122 aaPredicted RBP0□□□□□ -2.41
GYPB-207ENST00000506679 COX6B1P14854 86 aa0□□□□□ -2.41
GYPB-207ENST00000506679 FLGP20930 4061 aaPredicted RBP0□□□□□ -2.41
GYPB-207ENST00000506679 ASIPP42127 132 aa0□□□□□ -2.41
GYPB-207ENST00000506679 GOLGB1Q14789 3259 aaKnown RBP0□□□□□ -2.41
GYPB-207ENST00000506679 C10orf113Q5VZT2 155 aa0□□□□□ -2.41
GYPB-207ENST00000506679 DEFB123Q8N688 67 aa0□□□□□ -2.41
GYPB-207ENST00000506679 TOPAZ1Q8N9V7 1692 aa0□□□□□ -2.41
GYPB-207ENST00000506679 C12orf57Q99622 126 aa0□□□□□ -2.41
GYPB-207ENST00000506679 NSD3Q9BZ95 1437 aa0□□□□□ -2.41
GYPB-207ENST00000506679 PEG3Q9GZU2 1588 aa0□□□□□ -2.41
GYPB-207ENST00000506679 PRO1933Q9H354 126 aa0□□□□□ -2.41
GYPB-207ENST00000506679 PLECQ15149 4684 aaKnown RBP-0.01□□□□□ -2.41
GYPB-207ENST00000506679 AKAP9Q99996 3911 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 PDCD11Q14690 1871 aaKnown RBP-0.01□□□□□ -2.41
GYPB-207ENST00000506679 SCN7AQ01118 1682 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 CC2D2AQ9P2K1 1620 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 TULP4Q9NRJ4 1543 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 GAPVD1Q14C86 1478 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 TRBV7-4A0A0J9YYF1 115 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 A0A1B0GWA3 101 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 CRYM-AS1A6NIL9 109 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 HSD52Q0P140 79 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 AKAP6Q13023 2319 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 PTPRQQ9UMZ3 2332 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 LPAP08519 4548 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 TRRAPQ9Y4A5 3859 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 A0A0G2JMZ2 1700 aa-0.01□□□□□ -2.41
GYPB-207ENST00000506679 ADGRL2O95490 1459 aa-0.02□□□□□ -2.41
GYPB-207ENST00000506679 S100PP25815 95 aa-0.02□□□□□ -2.41
GYPB-207ENST00000506679 SNCAP37840 140 aa-0.02□□□□□ -2.41
GYPB-207ENST00000506679 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
GYPB-207ENST00000506679 CGREF1Q99674 301 aa-0.02□□□□□ -2.41
GYPB-207ENST00000506679 VPS13BQ7Z7G8 4022 aa-0.02□□□□□ -2.41
GYPB-207ENST00000506679 XRN1Q8IZH2 1706 aaKnown RBP-0.02□□□□□ -2.41
GYPB-207ENST00000506679 ZFYVE16Q7Z3T8 1539 aa-0.03□□□□□ -2.41
GYPB-207ENST00000506679 CHD7Q9P2D1 2997 aa-0.03□□□□□ -2.41
GYPB-207ENST00000506679 C1orf167Q5SNV9 1468 aa-0.03□□□□□ -2.41
GYPB-207ENST00000506679 FAM223BA6NKX1 122 aa-0.03□□□□□ -2.41
GYPB-207ENST00000506679 ZZEF1O43149 2961 aa-0.03□□□□□ -2.41
GYPB-207ENST00000506679 NDUFC1O43677 76 aa-0.03□□□□□ -2.41
GYPB-207ENST00000506679 FDCSPQ8NFU4 85 aa-0.03□□□□□ -2.41
GYPB-207ENST00000506679 LINC01600Q96MT4 127 aa-0.03□□□□□ -2.41
GYPB-207ENST00000506679 TCEAL7Q9BRU2 100 aa-0.03□□□□□ -2.41
GYPB-207ENST00000506679 MUC17Q685J3 4493 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms