RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 TTTY13Q9BZ97 58 aa4.35□□□□□ -1.71
NR1I3-221ENST00000505944 TP73-AS1Q9UF72 201 aa4.35□□□□□ -1.71
NR1I3-221ENST00000505944 A0A096LNI7 61 aa4.34□□□□□ -1.71
NR1I3-221ENST00000505944 NDUFA1O15239 70 aa4.34□□□□□ -1.71
NR1I3-221ENST00000505944 MT1HL1P0DM35 61 aa4.34□□□□□ -1.71
NR1I3-221ENST00000505944 PLNP26678 52 aa4.34□□□□□ -1.71
NR1I3-221ENST00000505944 CKS1BP61024 79 aa4.34□□□□□ -1.71
NR1I3-221ENST00000505944 GAGE2EQ4V326 116 aa4.34□□□□□ -1.71
NR1I3-221ENST00000505944 GAGE2DQ9UEU5 116 aa4.34□□□□□ -1.71
NR1I3-221ENST00000505944 IGKV2D-26A0A0A0MRZ7 120 aa4.33□□□□□ -1.72
NR1I3-221ENST00000505944 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.33□□□□□ -1.72
NR1I3-221ENST00000505944 FAM168BA1KXE4 195 aa4.33□□□□□ -1.72
NR1I3-221ENST00000505944 KRTAP9-7A8MTY7 169 aa4.33□□□□□ -1.72
NR1I3-221ENST00000505944 HNRNPA3P51991 378 aaKnown RBP4.33□□□□□ -1.72
NR1I3-221ENST00000505944 RNF151Q2KHN1 245 aa4.33□□□□□ -1.72
NR1I3-221ENST00000505944 Q8IZM0 81 aa4.33□□□□□ -1.72
NR1I3-221ENST00000505944 C9orf163Q8N9P6 203 aa4.33□□□□□ -1.72
NR1I3-221ENST00000505944 C20orf202A1L168 122 aa4.32□□□□□ -1.72
NR1I3-221ENST00000505944 PFN2P35080 140 aa4.32□□□□□ -1.72
NR1I3-221ENST00000505944 AKR1D1P51857 326 aa4.32□□□□□ -1.72
NR1I3-221ENST00000505944 CTAG1AP78358 180 aa4.32□□□□□ -1.72
NR1I3-221ENST00000505944 SDIM1Q6ZPB5 146 aa4.32□□□□□ -1.72
NR1I3-221ENST00000505944 C2orf48Q96LS8 159 aa4.32□□□□□ -1.72
NR1I3-221ENST00000505944 XAGE1AQ9HD64 81 aa4.32□□□□□ -1.72
NR1I3-221ENST00000505944 J3QQQ9 107 aa4.31□□□□□ -1.72
NR1I3-221ENST00000505944 NMUP48645 174 aa4.31□□□□□ -1.72
NR1I3-221ENST00000505944 HERVK_113P61574 105 aa4.31□□□□□ -1.72
NR1I3-221ENST00000505944 Q6ZRP5 223 aa4.31□□□□□ -1.72
NR1I3-221ENST00000505944 LINC01561Q8N1V8 128 aa4.31□□□□□ -1.72
NR1I3-221ENST00000505944 DAND5Q8N907 189 aa4.31□□□□□ -1.72
NR1I3-221ENST00000505944 DPH3Q96FX2 82 aa4.31□□□□□ -1.72
NR1I3-221ENST00000505944 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
NR1I3-221ENST00000505944 NDUFA12Q9UI09 145 aa4.31□□□□□ -1.72
NR1I3-221ENST00000505944 LOC107984640A0A0U1RRK4 108 aa4.3□□□□□ -1.72
NR1I3-221ENST00000505944 GAGE10A6NGK3 116 aa4.3□□□□□ -1.72
NR1I3-221ENST00000505944 LEPROTO15243 131 aa4.3□□□□□ -1.72
NR1I3-221ENST00000505944 SMIM13P0DJ93 91 aa4.3□□□□□ -1.72
NR1I3-221ENST00000505944 LGALS3P17931 250 aaKnown RBP4.3□□□□□ -1.72
NR1I3-221ENST00000505944 PTTG1IPP53801 180 aa4.3□□□□□ -1.72
NR1I3-221ENST00000505944 NPC2P61916 151 aa4.3□□□□□ -1.72
NR1I3-221ENST00000505944 FAM19A5Q7Z5A7 132 aaPredicted RBP4.3□□□□□ -1.72
NR1I3-221ENST00000505944 PCP2Q8IVA1 136 aa4.3□□□□□ -1.72
NR1I3-221ENST00000505944 PLEKHB2Q96CS7 222 aa4.3□□□□□ -1.72
NR1I3-221ENST00000505944 A0A087WYN8 130 aa4.29□□□□□ -1.72
NR1I3-221ENST00000505944 TRBV30A0A0K0K1B3 111 aa4.29□□□□□ -1.72
NR1I3-221ENST00000505944 A0A0U1RQV1 116 aa4.29□□□□□ -1.72
NR1I3-221ENST00000505944 A0A1W2PNN7 141 aa4.29□□□□□ -1.72
NR1I3-221ENST00000505944 E9PLD3 99 aa4.29□□□□□ -1.72
NR1I3-221ENST00000505944 MEIG1Q5JSS6 88 aa4.29□□□□□ -1.72
NR1I3-221ENST00000505944 C9orf129Q5T035 196 aaKnown RBP4.29□□□□□ -1.72
NR1I3-221ENST00000505944 Q8NDZ9 215 aa4.29□□□□□ -1.72
NR1I3-221ENST00000505944 SPACA4Q8TDM5 124 aa4.29□□□□□ -1.72
NR1I3-221ENST00000505944 C7orf33Q8WU49 177 aa4.29□□□□□ -1.72
NR1I3-221ENST00000505944 LINC01600Q96MT4 127 aa4.29□□□□□ -1.72
NR1I3-221ENST00000505944 ZNF815PA8K554 130 aa4.28□□□□□ -1.72
NR1I3-221ENST00000505944 LINC00158P58513 81 aa4.28□□□□□ -1.72
NR1I3-221ENST00000505944 PYY3Q5JQD4 70 aa4.28□□□□□ -1.72
NR1I3-221ENST00000505944 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
NR1I3-221ENST00000505944 ERG28Q9UKR5 140 aa4.28□□□□□ -1.72
NR1I3-221ENST00000505944 PAM16Q9Y3D7 125 aa4.28□□□□□ -1.72
NR1I3-221ENST00000505944 A0A0J9YXY3 114 aa4.27□□□□□ -1.73
NR1I3-221ENST00000505944 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
NR1I3-221ENST00000505944 NDUFC2-KCTD14E9PQ53 114 aa4.27□□□□□ -1.73
NR1I3-221ENST00000505944 CXCL5P42830 114 aa4.27□□□□□ -1.73
NR1I3-221ENST00000505944 CIRBPQ14011 172 aaKnown RBP4.27□□□□□ -1.73
NR1I3-221ENST00000505944 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
NR1I3-221ENST00000505944 REG3GQ6UW15 175 aa4.27□□□□□ -1.73
NR1I3-221ENST00000505944 PHF5AQ7RTV0 110 aaKnown RBP4.27□□□□□ -1.73
NR1I3-221ENST00000505944 SND1-IT1Q9HBX3 110 aa4.27□□□□□ -1.73
NR1I3-221ENST00000505944 ADAMTSL4-AS1Q5T5F5 129 aa4.26□□□□□ -1.73
NR1I3-221ENST00000505944 KRTAP11-1Q8IUC1 163 aa4.26□□□□□ -1.73
NR1I3-221ENST00000505944 MIR7-3HGQ8N6C7 128 aa4.26□□□□□ -1.73
NR1I3-221ENST00000505944 HSBP1L1C9JCN9 74 aa4.25□□□□□ -1.73
NR1I3-221ENST00000505944 F8WDY8 70 aa4.25□□□□□ -1.73
NR1I3-221ENST00000505944 NCR3O14931 201 aa4.25□□□□□ -1.73
NR1I3-221ENST00000505944 TLX1NBP0CAT3 122 aa4.25□□□□□ -1.73
NR1I3-221ENST00000505944 PRR3P79522 188 aaKnown RBP4.25□□□□□ -1.73
NR1I3-221ENST00000505944 JOSD1Q15040 202 aaPredicted RBP4.25□□□□□ -1.73
NR1I3-221ENST00000505944 SPATA45Q537H7 98 aa4.25□□□□□ -1.73
NR1I3-221ENST00000505944 SOSTDC1Q6X4U4 206 aa4.25□□□□□ -1.73
NR1I3-221ENST00000505944 C14orf144Q96I85 54 aa4.25□□□□□ -1.73
NR1I3-221ENST00000505944 VAMP8Q9BV40 100 aa4.25□□□□□ -1.73
NR1I3-221ENST00000505944 PKIGQ9Y2B9 76 aa4.25□□□□□ -1.73
NR1I3-221ENST00000505944 LOC105371267A0A1B0GV96 52 aa4.24□□□□□ -1.73
NR1I3-221ENST00000505944 M0QXV9 152 aa4.24□□□□□ -1.73
NR1I3-221ENST00000505944 SPINK6Q6UWN8 80 aa4.24□□□□□ -1.73
NR1I3-221ENST00000505944 SCGB1D4Q6XE38 83 aa4.24□□□□□ -1.73
NR1I3-221ENST00000505944 LITAFQ99732 161 aa4.24□□□□□ -1.73
NR1I3-221ENST00000505944 PLAC8Q9NZF1 115 aa4.24□□□□□ -1.73
NR1I3-221ENST00000505944 RPL37AP8A6NKH3 93 aa4.23□□□□□ -1.73
NR1I3-221ENST00000505944 HERV-K104P63124 156 aa4.23□□□□□ -1.73
NR1I3-221ENST00000505944 BOD1L2Q8IYS8 172 aa4.23□□□□□ -1.73
NR1I3-221ENST00000505944 LPAP08519 4548 aa4.22□□□□□ -1.73
NR1I3-221ENST00000505944 IGKV2-28A0A075B6P5 120 aa4.22□□□□□ -1.73
NR1I3-221ENST00000505944 IGKV2D-28P01615 120 aa4.22□□□□□ -1.73
NR1I3-221ENST00000505944 KRTAP9-3Q9BYQ3 159 aa4.22□□□□□ -1.73
NR1I3-221ENST00000505944 PRO1933Q9H354 126 aa4.22□□□□□ -1.73
NR1I3-221ENST00000505944 LINC00474Q9P2X8 69 aa4.22□□□□□ -1.73
NR1I3-221ENST00000505944 C22orf24Q9Y442 160 aa4.22□□□□□ -1.73
NR1I3-221ENST00000505944 VPREB1P12018 145 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms