RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 HAMPP81172 84 aa1.14□□□□□ -2.23
COPS4-203ENST00000504274 RICTORQ6R327 1708 aa1.14□□□□□ -2.23
COPS4-203ENST00000504274 PREX2Q70Z35 1606 aa1.14□□□□□ -2.23
COPS4-203ENST00000504274 URB2Q14146 1524 aaKnown RBP1.14□□□□□ -2.23
COPS4-203ENST00000504274 UMAD1C9J7I0 102 aa1.13□□□□□ -2.23
COPS4-203ENST00000504274 HILPDAQ9Y5L2 63 aa1.13□□□□□ -2.23
COPS4-203ENST00000504274 NHSQ6T4R5 1651 aa1.13□□□□□ -2.23
COPS4-203ENST00000504274 PREX1Q8TCU6 1659 aa1.13□□□□□ -2.23
COPS4-203ENST00000504274 JMJD1CQ15652 2540 aa1.12□□□□□ -2.23
COPS4-203ENST00000504274 LMTK2Q8IWU2 1503 aa1.12□□□□□ -2.23
COPS4-203ENST00000504274 TRBV6-1A0A0K0K1D8 114 aa1.12□□□□□ -2.23
COPS4-203ENST00000504274 IFI6P09912 130 aa1.12□□□□□ -2.23
COPS4-203ENST00000504274 HFM1A2PYH4 1435 aa1.12□□□□□ -2.23
COPS4-203ENST00000504274 TIAM1Q13009 1591 aa1.12□□□□□ -2.23
COPS4-203ENST00000504274 ABCA6Q8N139 1617 aa1.11□□□□□ -2.23
COPS4-203ENST00000504274 ITSN2Q9NZM3 1697 aa1.11□□□□□ -2.23
COPS4-203ENST00000504274 TRAV21A0A0B4J279 112 aa1.11□□□□□ -2.23
COPS4-203ENST00000504274 ERCC6L2Q5T890 1561 aa1.1□□□□□ -2.23
COPS4-203ENST00000504274 A0A1B0GU69 56 aa1.1□□□□□ -2.23
COPS4-203ENST00000504274 A0A1B0GUT8 65 aa1.1□□□□□ -2.23
COPS4-203ENST00000504274 I3L2K1 104 aa1.1□□□□□ -2.23
COPS4-203ENST00000504274 IFI27P40305 119 aaPredicted RBP1.1□□□□□ -2.23
COPS4-203ENST00000504274 GNGT1P63211 74 aa1.1□□□□□ -2.23
COPS4-203ENST00000504274 LRRC37AA6NMS7 1700 aa1.09□□□□□ -2.23
COPS4-203ENST00000504274 A0A0D9SG42 100 aa1.09□□□□□ -2.23
COPS4-203ENST00000504274 LCE6AA0A183 80 aa1.09□□□□□ -2.23
COPS4-203ENST00000504274 PIN1P1O15428 100 aa1.09□□□□□ -2.23
COPS4-203ENST00000504274 ATP5EP2Q5VTU8 51 aa1.09□□□□□ -2.23
COPS4-203ENST00000504274 SSBP3-AS1Q7Z2R9 100 aa1.09□□□□□ -2.23
COPS4-203ENST00000504274 NAV3Q8IVL0 2385 aa1.09□□□□□ -2.23
COPS4-203ENST00000504274 A0A087WWC5 75 aa1.08□□□□□ -2.24
COPS4-203ENST00000504274 COX8AP10176 69 aa1.08□□□□□ -2.24
COPS4-203ENST00000504274 PRB3Q04118 309 aaPredicted RBP1.08□□□□□ -2.24
COPS4-203ENST00000504274 ASH1LQ9NR48 2969 aaKnown RBP1.08□□□□□ -2.24
COPS4-203ENST00000504274 MROH2AA6NES4 1674 aa1.07□□□□□ -2.24
COPS4-203ENST00000504274 TJP1Q07157 1748 aa1.07□□□□□ -2.24
COPS4-203ENST00000504274 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
COPS4-203ENST00000504274 UBE2DNLQ8IWF7 75 aa1.07□□□□□ -2.24
COPS4-203ENST00000504274 ALS2Q96Q42 1657 aa1.07□□□□□ -2.24
COPS4-203ENST00000504274 RALGAPBQ86X10 1494 aa1.06□□□□□ -2.24
COPS4-203ENST00000504274 FXYD6-FXYD2A0A087WZ82 144 aa1.06□□□□□ -2.24
COPS4-203ENST00000504274 DEFB112Q30KQ8 113 aa1.06□□□□□ -2.24
COPS4-203ENST00000504274 PLXNC1O60486 1568 aa1.05□□□□□ -2.24
COPS4-203ENST00000504274 S100ZQ8WXG8 99 aa1.05□□□□□ -2.24
COPS4-203ENST00000504274 CRIPTQ9P021 101 aa1.05□□□□□ -2.24
COPS4-203ENST00000504274 URB1O60287 2271 aaKnown RBP1.05□□□□□ -2.24
COPS4-203ENST00000504274 FAM208BQ5VWN6 2430 aa1.05□□□□□ -2.24
COPS4-203ENST00000504274 A0A087WXM4 84 aa1.04□□□□□ -2.24
COPS4-203ENST00000504274 C3orf79P0CE67 100 aa1.04□□□□□ -2.24
COPS4-203ENST00000504274 NREPQ16612 68 aa1.04□□□□□ -2.24
COPS4-203ENST00000504274 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
COPS4-203ENST00000504274 AHCTF1Q8WYP5 2266 aa1.03□□□□□ -2.24
COPS4-203ENST00000504274 H3BVH4 76 aa1.03□□□□□ -2.24
COPS4-203ENST00000504274 FAM103A1Q9BTL3 118 aaKnown RBP1.03□□□□□ -2.24
COPS4-203ENST00000504274 SFTA3P0C7M3 94 aa1.02□□□□□ -2.25
COPS4-203ENST00000504274 COX7BP24311 80 aa1.02□□□□□ -2.25
COPS4-203ENST00000504274 NWD1Q149M9 1564 aa1.02□□□□□ -2.25
COPS4-203ENST00000504274 GAFA1Q96PS6 74 aa1.02□□□□□ -2.25
COPS4-203ENST00000504274 RNF17Q9BXT8 1623 aaKnown RBP1.02□□□□□ -2.25
COPS4-203ENST00000504274 ANKRD50Q9ULJ7 1429 aa1.02□□□□□ -2.25
COPS4-203ENST00000504274 MEGF8Q7Z7M0 2845 aa1.02□□□□□ -2.25
COPS4-203ENST00000504274 SPINK9Q5DT21 86 aa1.01□□□□□ -2.25
COPS4-203ENST00000504274 DEFB123Q8N688 67 aa1.01□□□□□ -2.25
COPS4-203ENST00000504274 WFDC9Q8NEX5 89 aa1.01□□□□□ -2.25
COPS4-203ENST00000504274 LY75O60449 1722 aa1.01□□□□□ -2.25
COPS4-203ENST00000504274 ZNF462Q96JM2 2506 aa1□□□□□ -2.25
COPS4-203ENST00000504274 ABCC6O95255 1503 aa1□□□□□ -2.25
COPS4-203ENST00000504274 TP53AIP1Q9HCN2 124 aa1□□□□□ -2.25
COPS4-203ENST00000504274 DDX60LQ5H9U9 1706 aaKnown RBP0.99□□□□□ -2.25
COPS4-203ENST00000504274 MAST1Q9Y2H9 1570 aa0.99□□□□□ -2.25
COPS4-203ENST00000504274 ABCA10Q8WWZ4 1543 aa0.99□□□□□ -2.25
COPS4-203ENST00000504274 TNRC6CQ9HCJ0 1690 aaKnown RBP0.98□□□□□ -2.25
COPS4-203ENST00000504274 K7EQZ3 153 aa0.98□□□□□ -2.25
COPS4-203ENST00000504274 BIVM-ERCC5R4GMW8 1640 aa0.97□□□□□ -2.25
COPS4-203ENST00000504274 NDUFB1O75438 58 aa0.97□□□□□ -2.25
COPS4-203ENST00000504274 FXYD6P3P58550 94 aa0.97□□□□□ -2.25
COPS4-203ENST00000504274 CNFNQ9BYD5 112 aa0.97□□□□□ -2.25
COPS4-203ENST00000504274 CPSF4LA6NMK7 179 aaKnown RBP0.96□□□□□ -2.26
COPS4-203ENST00000504274 ATXN8Q156A1 80 aa0.96□□□□□ -2.26
COPS4-203ENST00000504274 PRXQ9BXM0 1461 aa0.96□□□□□ -2.26
COPS4-203ENST00000504274 C3P01024 1663 aa0.96□□□□□ -2.26
COPS4-203ENST00000504274 PIEZO2Q9H5I5 2752 aa0.96□□□□□ -2.26
COPS4-203ENST00000504274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.95□□□□□ -2.26
COPS4-203ENST00000504274 PLCE1Q9P212 2302 aa0.95□□□□□ -2.26
COPS4-203ENST00000504274 CROCC2H7BZ55 1655 aa0.95□□□□□ -2.26
COPS4-203ENST00000504274 GOLGA4Q13439 2230 aaKnown RBP0.95□□□□□ -2.26
COPS4-203ENST00000504274 NOTCH1P46531 2555 aa0.95□□□□□ -2.26
COPS4-203ENST00000504274 A0A0D9SFI3 127 aa0.95□□□□□ -2.26
COPS4-203ENST00000504274 ZNF469Q96JG9 3925 aaPredicted RBP0.95□□□□□ -2.26
COPS4-203ENST00000504274 NDUFA4O00483 81 aa0.94□□□□□ -2.26
COPS4-203ENST00000504274 COX6A2Q02221 97 aa0.94□□□□□ -2.26
COPS4-203ENST00000504274 LELP1Q5T871 98 aa0.94□□□□□ -2.26
COPS4-203ENST00000504274 ENHOQ6UWT2 76 aa0.94□□□□□ -2.26
COPS4-203ENST00000504274 CACNA1HO95180 2353 aa0.93□□□□□ -2.26
COPS4-203ENST00000504274 C4AP0C0L4 1744 aa0.93□□□□□ -2.26
COPS4-203ENST00000504274 C4BP0C0L5 1744 aa0.93□□□□□ -2.26
COPS4-203ENST00000504274 FBN2P35556 2912 aa0.93□□□□□ -2.26
COPS4-203ENST00000504274 USF3Q68DE3 2245 aa0.93□□□□□ -2.26
COPS4-203ENST00000504274 CLASP1Q7Z460 1538 aa0.93□□□□□ -2.26
COPS4-203ENST00000504274 DOPEY2Q9Y3R5 2298 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms