RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 RELNP78509 3460 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 POLQO75417 2590 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 TPRP12270 2363 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 A0A087WVE0 104 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 TRBV7-4A0A0J9YYF1 115 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 H0Y9P7 68 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 ZNF137PP52743 207 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 CAV3P56539 151 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 KRTAP10-4P60372 401 aaPredicted RBP1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 GDF5OSQ5U4N7 250 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 C5orf56Q8N8D9 126 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 TMEM263Q8WUH6 116 aaKnown RBP1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 USP32Q8NFA0 1604 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 UGGT1Q9NYU2 1555 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 SPEGQ15772 3267 aa1.46□□□□□ -2.18
TRAPPC13-205ENST00000504243 TOP2AP11388 1531 aaKnown RBP1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 E9PCH4 1651 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 NHSQ6T4R5 1651 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 TET1Q8NFU7 2136 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 ABCA4P78363 2273 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 PAPPAQ13219 1627 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 SPG11Q96JI7 2443 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 NBDYA0A0U1RRE5 68 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 C10orf142B7Z368 130 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 Q6ZQY7 126 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 TOMM5Q8N4H5 51 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 PROK2Q9HC23 129 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 CDC42BPGQ6DT37 1551 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 COL6A5A8TX70 2615 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 RYR3Q15413 4870 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 RREB1Q92766 1687 aa1.45□□□□□ -2.18
TRAPPC13-205ENST00000504243 ANKRD36A6QL64 1941 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 CD163L1Q9NR16 1453 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 MUC2Q02817 5179 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 CRYBG1Q9Y4K1 1723 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 GLI2P10070 1586 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 COL6A6A6NMZ7 2263 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 TRAV1-2A0A0B4J238 106 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 TRBV30A0A0K0K1B3 111 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 LINC01549A6NIU2 74 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 C10orf113Q5VZT2 155 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 SPATA8Q6RVD6 105 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 DEFB107AQ8IZN7 70 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 FDCSPQ8NFU4 85 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 LINC00208Q96KT6 92 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 OBSCN-AS1Q96MR7 158 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 SPRR4Q96PI1 79 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 ARFGEF1Q9Y6D6 1849 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 SHPRHQ149N8 1683 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 ALS2Q96Q42 1657 aa1.44□□□□□ -2.18
TRAPPC13-205ENST00000504243 ASPMQ8IZT6 3477 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 EP400Q96L91 3159 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 ARHGEF5Q12774 1597 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 CROCC2H7BZ55 1655 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 PRH1P02810 166 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 ACYP2P14621 99 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 SERF2P84101 59 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 UBL5Q9BZL1 73 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 CPS1P31327 1500 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 LOC285556D6RIA3 1793 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 NHSL1Q5SYE7 1610 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 MAP1BP46821 2468 aaKnown RBP1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 CCDC168Q8NDH2 2452 aa1.43□□□□□ -2.18
TRAPPC13-205ENST00000504243 CENPFP49454 3210 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 CFAP54Q96N23 3096 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 DNAJC13O75165 2243 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 BIRC6Q9NR09 4857 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 ALKQ9UM73 1620 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 A0A087WTM6 91 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 TRGV1A0A0A0MS02 117 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 TRBV6-1A0A0K0K1D8 114 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 S100A3P33764 101 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 NREPQ16612 68 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 WFDC9Q8NEX5 89 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 PLAC8Q9NZF1 115 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 IFT172Q9UG01 1749 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 FLG2Q5D862 2391 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 KIF1AQ12756 1690 aa1.42□□□□□ -2.18
TRAPPC13-205ENST00000504243 UBR3Q6ZT12 1888 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 FAM208BQ5VWN6 2430 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 ZFYVE26Q68DK2 2539 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 NCOR2Q9Y618 2525 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 LRRC7Q96NW7 1537 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 CICQ96RK0 1608 aaPredicted RBP1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 PKD1L3Q7Z443 1732 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 SPTAN1Q13813 2472 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 TSC2P49815 1807 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 TRAV21A0A0B4J279 112 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 NCR3O14931 201 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 PIN1P1O15428 100 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 IFI6P09912 130 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 RPL38P63173 70 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 C10orf99Q6UWK7 81 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 GAFA1Q96PS6 74 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 NMES1Q9C002 83 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 CEP170BQ9Y4F5 1589 aaPredicted RBP1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 MROH2AA6NES4 1674 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 SCN7AQ01118 1682 aa1.41□□□□□ -2.18
TRAPPC13-205ENST00000504243 ITSN2Q9NZM3 1697 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms