RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 F6UB75 175 aa6.69□□□□□ -1.34
PDLIM5-207ENST00000503974 NCR3O14931 201 aa6.69□□□□□ -1.34
PDLIM5-207ENST00000503974 CMC4P56277 68 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-207ENST00000503974 MAP6D1Q9H9H5 199 aa6.69□□□□□ -1.34
PDLIM5-207ENST00000503974 PRYO14603 147 aa6.69□□□□□ -1.34
PDLIM5-207ENST00000503974 LINC00308Q8TCZ7 52 aa6.69□□□□□ -1.34
PDLIM5-207ENST00000503974 UBL5Q9BZL1 73 aa6.69□□□□□ -1.34
PDLIM5-207ENST00000503974 NOTCH1P46531 2555 aa6.68□□□□□ -1.34
PDLIM5-207ENST00000503974 A0A0J9YXV3 536 aa6.68□□□□□ -1.34
PDLIM5-207ENST00000503974 UBE2AP49459 152 aa6.68□□□□□ -1.34
PDLIM5-207ENST00000503974 POLR2KP53803 58 aaKnown RBP6.67□□□□□ -1.34
PDLIM5-207ENST00000503974 IGFL4Q6B9Z1 124 aa6.67□□□□□ -1.34
PDLIM5-207ENST00000503974 DEFB131AP59861 70 aa6.67□□□□□ -1.34
PDLIM5-207ENST00000503974 KIF25-AS1Q9Y6Z4 181 aa6.67□□□□□ -1.34
PDLIM5-207ENST00000503974 K7EIL1 84 aa6.66□□□□□ -1.34
PDLIM5-207ENST00000503974 Q5VV11 94 aa6.66□□□□□ -1.34
PDLIM5-207ENST00000503974 MIR7-3HGQ8N6C7 128 aa6.66□□□□□ -1.34
PDLIM5-207ENST00000503974 C11orf72Q8NBR9 251 aa6.66□□□□□ -1.34
PDLIM5-207ENST00000503974 WFDC10AQ9H1F0 79 aa6.66□□□□□ -1.34
PDLIM5-207ENST00000503974 Q9H8V8 135 aa6.66□□□□□ -1.34
PDLIM5-207ENST00000503974 LRCOL1A6NCL2 159 aa6.65□□□□□ -1.34
PDLIM5-207ENST00000503974 A8MTW9 85 aa6.65□□□□□ -1.34
PDLIM5-207ENST00000503974 NREPQ16612 68 aa6.65□□□□□ -1.34
PDLIM5-207ENST00000503974 C9orf47Q6ZRZ4 202 aa6.65□□□□□ -1.34
PDLIM5-207ENST00000503974 NKAPP1Q8N9T2 125 aa6.65□□□□□ -1.35
PDLIM5-207ENST00000503974 A0A087WYN8 130 aa6.64□□□□□ -1.35
PDLIM5-207ENST00000503974 PRB2P02812 416 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-207ENST00000503974 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
PDLIM5-207ENST00000503974 IGHV4-30-4P0DP06 118 aa6.64□□□□□ -1.35
PDLIM5-207ENST00000503974 HCG22E2RYF7 251 aa6.63□□□□□ -1.35
PDLIM5-207ENST00000503974 DEFB1P60022 68 aa6.63□□□□□ -1.35
PDLIM5-207ENST00000503974 C1orf64Q8NEQ6 169 aa6.63□□□□□ -1.35
PDLIM5-207ENST00000503974 TRAV21A0A0B4J279 112 aa6.62□□□□□ -1.35
PDLIM5-207ENST00000503974 PRAC2D3DTV9 90 aa6.62□□□□□ -1.35
PDLIM5-207ENST00000503974 JMJD7-PLA2G4BH0Y9G9 81 aa6.62□□□□□ -1.35
PDLIM5-207ENST00000503974 MGPP08493 103 aa6.62□□□□□ -1.35
PDLIM5-207ENST00000503974 LINC01547P58512 204 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-207ENST00000503974 LINC00313P59037 77 aa6.62□□□□□ -1.35
PDLIM5-207ENST00000503974 H0YGX0 51 aa6.62□□□□□ -1.35
PDLIM5-207ENST00000503974 GNRH2O43555 120 aa6.62□□□□□ -1.35
PDLIM5-207ENST00000503974 Q8N3U1 123 aa6.62□□□□□ -1.35
PDLIM5-207ENST00000503974 ORMDL1Q9P0S3 153 aa6.62□□□□□ -1.35
PDLIM5-207ENST00000503974 NDUFA1O15239 70 aa6.61□□□□□ -1.35
PDLIM5-207ENST00000503974 IGHV1OR15-1A0A075B7D0 117 aa6.61□□□□□ -1.35
PDLIM5-207ENST00000503974 IGKV2-29A2NJV5 120 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-207ENST00000503974 PSCAO43653 123 aa6.61□□□□□ -1.35
PDLIM5-207ENST00000503974 CXCL6P80162 114 aa6.61□□□□□ -1.35
PDLIM5-207ENST00000503974 IGLV4-3A0A075B6K6 122 aa6.6□□□□□ -1.35
PDLIM5-207ENST00000503974 MEGF8Q7Z7M0 2845 aa6.59□□□□□ -1.35
PDLIM5-207ENST00000503974 LINC01554Q52M75 96 aa6.59□□□□□ -1.35
PDLIM5-207ENST00000503974 FBN3Q75N90 2809 aa6.59□□□□□ -1.35
PDLIM5-207ENST00000503974 GIG44P09565 113 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-207ENST00000503974 LINC00315P59091 139 aa6.59□□□□□ -1.35
PDLIM5-207ENST00000503974 DEFB104AQ8WTQ1 72 aa6.59□□□□□ -1.35
PDLIM5-207ENST00000503974 LENEPQ9Y5L5 61 aa6.59□□□□□ -1.35
PDLIM5-207ENST00000503974 CHKB-CPT1BH3BT56 60 aa6.58□□□□□ -1.36
PDLIM5-207ENST00000503974 TRBV6-5A0A0K0K1A5 114 aa6.57□□□□□ -1.36
PDLIM5-207ENST00000503974 LECT2O14960 151 aa6.57□□□□□ -1.36
PDLIM5-207ENST00000503974 LINC00337Q8N6G1 96 aa6.57□□□□□ -1.36
PDLIM5-207ENST00000503974 B9D2Q9BPU9 175 aa6.57□□□□□ -1.36
PDLIM5-207ENST00000503974 C20orf203Q8NBC4 194 aa6.57□□□□□ -1.36
PDLIM5-207ENST00000503974 CSNK1G2-AS1Q8NCQ2 148 aa6.57□□□□□ -1.36
PDLIM5-207ENST00000503974 TRBV6-8A0A0A6YYG3 113 aa6.56□□□□□ -1.36
PDLIM5-207ENST00000503974 KLLNB2CW77 178 aa6.56□□□□□ -1.36
PDLIM5-207ENST00000503974 BPY2O14599 106 aa6.56□□□□□ -1.36
PDLIM5-207ENST00000503974 IGKV3-20P01619 116 aa6.56□□□□□ -1.36
PDLIM5-207ENST00000503974 MED14OSP0DP75 135 aa6.56□□□□□ -1.36
PDLIM5-207ENST00000503974 Q6ZTI0 123 aa6.56□□□□□ -1.36
PDLIM5-207ENST00000503974 ZFAND2AQ8N6M9 145 aa6.56□□□□□ -1.36
PDLIM5-207ENST00000503974 CYP4F30PQ9H0H9 118 aa6.56□□□□□ -1.36
PDLIM5-207ENST00000503974 SPINK13Q1W4C9 94 aa6.56□□□□□ -1.36
PDLIM5-207ENST00000503974 LINC00167Q96N53 147 aa6.56□□□□□ -1.36
PDLIM5-207ENST00000503974 SLPIP03973 132 aa6.55□□□□□ -1.36
PDLIM5-207ENST00000503974 MP68P56378 58 aa6.55□□□□□ -1.36
PDLIM5-207ENST00000503974 HAMPP81172 84 aa6.55□□□□□ -1.36
PDLIM5-207ENST00000503974 SMIM11BQ8TCY0 68 aa6.55□□□□□ -1.36
PDLIM5-207ENST00000503974 FAM104AQ969W3 186 aa6.55□□□□□ -1.36
PDLIM5-207ENST00000503974 OCR1Q9BZK8 76 aa6.55□□□□□ -1.36
PDLIM5-207ENST00000503974 TRBV10-1A0A0K0K1A3 114 aa6.54□□□□□ -1.36
PDLIM5-207ENST00000503974 LOC100131303A0A0U1RQF7 123 aa6.54□□□□□ -1.36
PDLIM5-207ENST00000503974 SUMO4Q6EEV6 95 aa6.54□□□□□ -1.36
PDLIM5-207ENST00000503974 HIGD2AQ9BW72 106 aa6.54□□□□□ -1.36
PDLIM5-207ENST00000503974 S100A4P26447 101 aaKnown RBP6.54□□□□□ -1.36
PDLIM5-207ENST00000503974 RNASE13Q5GAN3 156 aaKnown RBP6.54□□□□□ -1.36
PDLIM5-207ENST00000503974 PRR9Q5T870 116 aa6.54□□□□□ -1.36
PDLIM5-207ENST00000503974 INSP01308 110 aa6.53□□□□□ -1.36
PDLIM5-207ENST00000503974 CRPP02741 224 aa6.53□□□□□ -1.36
PDLIM5-207ENST00000503974 RPL36AP83881 106 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-207ENST00000503974 DEFB135Q30KP9 77 aa6.53□□□□□ -1.36
PDLIM5-207ENST00000503974 RPL36ALQ969Q0 106 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-207ENST00000503974 PRKDCP78527 4128 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-207ENST00000503974 IGHV3-38A0A0C4DH36 116 aa6.53□□□□□ -1.36
PDLIM5-207ENST00000503974 LIMD2Q9BT23 127 aa6.53□□□□□ -1.36
PDLIM5-207ENST00000503974 KIAA0087Q14695 138 aa6.52□□□□□ -1.37
PDLIM5-207ENST00000503974 LINC00467Q9BRT7 94 aa6.52□□□□□ -1.37
PDLIM5-207ENST00000503974 CDC42SE1Q9NRR8 79 aa6.52□□□□□ -1.37
PDLIM5-207ENST00000503974 X6R8D5 127 aa6.52□□□□□ -1.37
PDLIM5-207ENST00000503974 Q6ZQT0 140 aa6.51□□□□□ -1.37
PDLIM5-207ENST00000503974 MOBPQ13875 183 aa6.51□□□□□ -1.37
PDLIM5-207ENST00000503974 LCE2DQ5TA82 110 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms