RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NAT8Q9UHE5 227 aa8.61□□□□□ -1.03
PDLIM7-210ENST00000503827 IGLV9-49A0A0B4J1Y8 123 aa8.6□□□□□ -1.03
PDLIM7-210ENST00000503827 ATP5L2Q7Z4Y8 100 aa8.6□□□□□ -1.03
PDLIM7-210ENST00000503827 LINC00483Q53H64 154 aa8.59□□□□□ -1.03
PDLIM7-210ENST00000503827 COX6B2Q6YFQ2 88 aa8.59□□□□□ -1.03
PDLIM7-210ENST00000503827 Q8NDZ9 215 aa8.59□□□□□ -1.03
PDLIM7-210ENST00000503827 ERG28Q9UKR5 140 aa8.59□□□□□ -1.03
PDLIM7-210ENST00000503827 COX17Q14061 63 aa8.58□□□□□ -1.04
PDLIM7-210ENST00000503827 TOMM6Q96B49 74 aa8.58□□□□□ -1.04
PDLIM7-210ENST00000503827 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
PDLIM7-210ENST00000503827 ERASQ7Z444 233 aa8.57□□□□□ -1.04
PDLIM7-210ENST00000503827 MRPL18Q9H0U6 180 aaKnown RBP8.57□□□□□ -1.04
PDLIM7-210ENST00000503827 NXT2Q9NPJ8 142 aaKnown RBP8.57□□□□□ -1.04
PDLIM7-210ENST00000503827 SCGB3A1Q96QR1 104 aa8.56□□□□□ -1.04
PDLIM7-210ENST00000503827 H3BRM9 83 aa8.55□□□□□ -1.04
PDLIM7-210ENST00000503827 TCTE3Q8IZS6 198 aa8.55□□□□□ -1.04
PDLIM7-210ENST00000503827 PRYO14603 147 aa8.54□□□□□ -1.04
PDLIM7-210ENST00000503827 ETDCA0A1B0GVM5 59 aa8.52□□□□□ -1.05
PDLIM7-210ENST00000503827 C9orf92A6NGG3 77 aa8.52□□□□□ -1.05
PDLIM7-210ENST00000503827 ZNF625Q96I27 306 aaPredicted RBP8.52□□□□□ -1.05
PDLIM7-210ENST00000503827 CST9LQ9H4G1 147 aa8.52□□□□□ -1.05
PDLIM7-210ENST00000503827 ADCYAP1P18509 176 aa8.51□□□□□ -1.05
PDLIM7-210ENST00000503827 SPRR1AP35321 89 aa8.51□□□□□ -1.05
PDLIM7-210ENST00000503827 FLGP20930 4061 aaPredicted RBP8.5□□□□□ -1.05
PDLIM7-210ENST00000503827 SSPOA2VEC9 5147 aa8.49□□□□□ -1.05
PDLIM7-210ENST00000503827 IGLV5-39A0A0G2JS06 123 aa8.49□□□□□ -1.05
PDLIM7-210ENST00000503827 C9JQL5 133 aa8.49□□□□□ -1.05
PDLIM7-210ENST00000503827 KRTAP4-16G5E9R7 235 aaPredicted RBP8.48□□□□□ -1.05
PDLIM7-210ENST00000503827 PMVKQ15126 192 aa8.48□□□□□ -1.05
PDLIM7-210ENST00000503827 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
PDLIM7-210ENST00000503827 LINC01549A6NIU2 74 aa8.47□□□□□ -1.05
PDLIM7-210ENST00000503827 C9orf153Q5TBE3 101 aa8.47□□□□□ -1.05
PDLIM7-210ENST00000503827 LINC00158P58513 81 aa8.46□□□□□ -1.06
PDLIM7-210ENST00000503827 SFTA2Q6UW10 78 aa8.46□□□□□ -1.06
PDLIM7-210ENST00000503827 USH2AO75445 5202 aa8.45□□□□□ -1.06
PDLIM7-210ENST00000503827 PEA15Q15121 130 aa8.45□□□□□ -1.06
PDLIM7-210ENST00000503827 ERC2-IT1O76042 136 aa8.44□□□□□ -1.06
PDLIM7-210ENST00000503827 NCR3O14931 201 aa8.43□□□□□ -1.06
PDLIM7-210ENST00000503827 IGLV6-57P01721 117 aa8.43□□□□□ -1.06
PDLIM7-210ENST00000503827 CFC1P0CG37 223 aa8.43□□□□□ -1.06
PDLIM7-210ENST00000503827 S100A12P80511 92 aa8.43□□□□□ -1.06
PDLIM7-210ENST00000503827 LIMD2Q9BT23 127 aa8.43□□□□□ -1.06
PDLIM7-210ENST00000503827 TRAV9-1A0A075B6T8 112 aa8.42□□□□□ -1.06
PDLIM7-210ENST00000503827 B5MCH6 92 aa8.42□□□□□ -1.06
PDLIM7-210ENST00000503827 IGLC3P0DOY3 106 aa8.42□□□□□ -1.06
PDLIM7-210ENST00000503827 A0A0U1RRA0 63 aa8.41□□□□□ -1.06
PDLIM7-210ENST00000503827 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
PDLIM7-210ENST00000503827 BOD1L2Q8IYS8 172 aa8.41□□□□□ -1.06
PDLIM7-210ENST00000503827 TRBV10-3A0A0K0K1G6 114 aa8.4□□□□□ -1.06
PDLIM7-210ENST00000503827 FCGBPQ9Y6R7 5405 aaPredicted RBP8.39□□□□□ -1.07
PDLIM7-210ENST00000503827 ATP6V1G1O75348 118 aa8.39□□□□□ -1.07
PDLIM7-210ENST00000503827 Q9BRP9 147 aa8.38□□□□□ -1.07
PDLIM7-210ENST00000503827 NDUFA6P56556 154 aa8.37□□□□□ -1.07
PDLIM7-210ENST00000503827 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
PDLIM7-210ENST00000503827 KIAA1644Q3SXP7 199 aa8.37□□□□□ -1.07
PDLIM7-210ENST00000503827 HRCT1Q6UXD1 115 aa8.36□□□□□ -1.07
PDLIM7-210ENST00000503827 LINC01546A6NGU7 62 aa8.35□□□□□ -1.07
PDLIM7-210ENST00000503827 Q6ZRX8 168 aa8.35□□□□□ -1.07
PDLIM7-210ENST00000503827 ANAPC16Q96DE5 110 aa8.35□□□□□ -1.07
PDLIM7-210ENST00000503827 TMEM170BQ5T4T1 132 aa8.34□□□□□ -1.07
PDLIM7-210ENST00000503827 Q6Q795 121 aa8.34□□□□□ -1.07
PDLIM7-210ENST00000503827 MT-ND4LP03901 98 aa8.33□□□□□ -1.08
PDLIM7-210ENST00000503827 SMIM13P0DJ93 91 aa8.33□□□□□ -1.08
PDLIM7-210ENST00000503827 KRTAP19-1Q8IUB9 90 aa8.32□□□□□ -1.08
PDLIM7-210ENST00000503827 MIR7-3HGQ8N6C7 128 aa8.32□□□□□ -1.08
PDLIM7-210ENST00000503827 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
PDLIM7-210ENST00000503827 JOSD1Q15040 202 aaPredicted RBP8.31□□□□□ -1.08
PDLIM7-210ENST00000503827 MEIG1Q5JSS6 88 aa8.31□□□□□ -1.08
PDLIM7-210ENST00000503827 FA2HQ7L5A8 372 aa8.31□□□□□ -1.08
PDLIM7-210ENST00000503827 KRTAP9-8Q9BYQ0 159 aa8.31□□□□□ -1.08
PDLIM7-210ENST00000503827 SMCO4Q9NRQ5 59 aa8.31□□□□□ -1.08
PDLIM7-210ENST00000503827 SYNE2Q8WXH0 6885 aaKnown RBP8.31□□□□□ -1.08
PDLIM7-210ENST00000503827 C11orf86A6NJI1 115 aa8.3□□□□□ -1.08
PDLIM7-210ENST00000503827 DDTP30046 118 aa8.3□□□□□ -1.08
PDLIM7-210ENST00000503827 ST20-AS1Q8NBB2 130 aa8.28□□□□□ -1.08
PDLIM7-210ENST00000503827 C5orf52A6NGY3 159 aa8.26□□□□□ -1.09
PDLIM7-210ENST00000503827 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
PDLIM7-210ENST00000503827 TRBV10-2A0A0K0K1G8 114 aa8.25□□□□□ -1.09
PDLIM7-210ENST00000503827 SLC25A34Q6PIV7 304 aa8.25□□□□□ -1.09
PDLIM7-210ENST00000503827 BAGE3Q86Y29 109 aa8.25□□□□□ -1.09
PDLIM7-210ENST00000503827 HERV-K104P63124 156 aa8.24□□□□□ -1.09
PDLIM7-210ENST00000503827 MAP1LC3CQ9BXW4 147 aa8.24□□□□□ -1.09
PDLIM7-210ENST00000503827 TMEM223A0PJW6 202 aa8.22□□□□□ -1.09
PDLIM7-210ENST00000503827 CD164Q04900 197 aa8.22□□□□□ -1.09
PDLIM7-210ENST00000503827 S100A7L2Q5SY68 101 aa8.22□□□□□ -1.09
PDLIM7-210ENST00000503827 A0A096LNJ9 63 aa8.21□□□□□ -1.1
PDLIM7-210ENST00000503827 SPRR1BP22528 89 aa8.21□□□□□ -1.1
PDLIM7-210ENST00000503827 C1orf195Q5TG92 126 aa8.21□□□□□ -1.1
PDLIM7-210ENST00000503827 LAMTOR3Q9UHA4 124 aa8.21□□□□□ -1.1
PDLIM7-210ENST00000503827 TRAV23DV6A0A075B6W5 121 aa8.2□□□□□ -1.1
PDLIM7-210ENST00000503827 H7C2G1 150 aa8.2□□□□□ -1.1
PDLIM7-210ENST00000503827 HBDP02042 147 aa8.19□□□□□ -1.1
PDLIM7-210ENST00000503827 Q5XG85 94 aa8.19□□□□□ -1.1
PDLIM7-210ENST00000503827 SPANXB1Q9NS25 103 aaPredicted RBP8.19□□□□□ -1.1
PDLIM7-210ENST00000503827 CHTOPQ9Y3Y2 248 aaKnown RBP8.19□□□□□ -1.1
PDLIM7-210ENST00000503827 LOC107984156A0A0G2JMH3 177 aa8.18□□□□□ -1.1
PDLIM7-210ENST00000503827 LCE2BO14633 110 aa8.18□□□□□ -1.1
PDLIM7-210ENST00000503827 ZNF73O43830 326 aaPredicted RBP8.18□□□□□ -1.1
PDLIM7-210ENST00000503827 ARL17AQ8IVW1 177 aa8.18□□□□□ -1.1
PDLIM7-210ENST00000503827 HINT1P49773 126 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms