RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 PRB4P10163 310 aaPredicted RBP4.49□□□□□ -1.69
CLCN3-203ENST00000502998 RPL36AP83881 106 aaKnown RBP4.49□□□□□ -1.69
CLCN3-203ENST00000502998 KRTAP24-1Q3LI83 254 aa4.49□□□□□ -1.69
CLCN3-203ENST00000502998 MIR7-3HGQ8N6C7 128 aa4.49□□□□□ -1.69
CLCN3-203ENST00000502998 LINC00308Q8TCZ7 52 aa4.49□□□□□ -1.69
CLCN3-203ENST00000502998 IGKV3D-20A0A0C4DH25 116 aa4.48□□□□□ -1.69
CLCN3-203ENST00000502998 NCR3O14931 201 aa4.48□□□□□ -1.69
CLCN3-203ENST00000502998 NDUFA1O15239 70 aa4.48□□□□□ -1.69
CLCN3-203ENST00000502998 CDK2AP2O75956 126 aa4.48□□□□□ -1.69
CLCN3-203ENST00000502998 HCP5Q6MZN7 132 aa4.48□□□□□ -1.69
CLCN3-203ENST00000502998 KRTAP4-5Q9BYR2 181 aa4.48□□□□□ -1.69
CLCN3-203ENST00000502998 IGHV4-61A0A0C4DH41 118 aa4.47□□□□□ -1.69
CLCN3-203ENST00000502998 LRCOL1A6NCL2 159 aa4.47□□□□□ -1.69
CLCN3-203ENST00000502998 IGKV3-15P01624 115 aa4.47□□□□□ -1.69
CLCN3-203ENST00000502998 IGLV1-44P01699 117 aa4.47□□□□□ -1.69
CLCN3-203ENST00000502998 IGLV1-51P01701 117 aa4.47□□□□□ -1.69
CLCN3-203ENST00000502998 NDPQ00604 133 aa4.47□□□□□ -1.69
CLCN3-203ENST00000502998 Q8N814 137 aa4.47□□□□□ -1.69
CLCN3-203ENST00000502998 DSCAML1Q8TD84 2053 aa4.47□□□□□ -1.69
CLCN3-203ENST00000502998 IGHV4OR15-8A0A075B7B6 117 aa4.46□□□□□ -1.7
CLCN3-203ENST00000502998 A0A087WW49 117 aa4.46□□□□□ -1.7
CLCN3-203ENST00000502998 TRBV10-1A0A0K0K1A3 114 aa4.46□□□□□ -1.7
CLCN3-203ENST00000502998 TRBV6-5A0A0K0K1A5 114 aa4.46□□□□□ -1.7
CLCN3-203ENST00000502998 CRPP02741 224 aa4.46□□□□□ -1.7
CLCN3-203ENST00000502998 HAMPP81172 84 aa4.46□□□□□ -1.7
CLCN3-203ENST00000502998 ZCCHC13Q8WW36 166 aaKnown RBP4.46□□□□□ -1.7
CLCN3-203ENST00000502998 LINC00467Q9BRT7 94 aa4.46□□□□□ -1.7
CLCN3-203ENST00000502998 S4R3C0 116 aa4.46□□□□□ -1.7
CLCN3-203ENST00000502998 IGHV3-72A0A0B4J1Y9 119 aa4.45□□□□□ -1.7
CLCN3-203ENST00000502998 DEFB114Q30KQ6 69 aa4.45□□□□□ -1.7
CLCN3-203ENST00000502998 C9orf129Q5T035 196 aaKnown RBP4.45□□□□□ -1.7
CLCN3-203ENST00000502998 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
CLCN3-203ENST00000502998 LINC00476Q8WZB0 136 aa4.45□□□□□ -1.7
CLCN3-203ENST00000502998 HIGD2AQ9BW72 106 aa4.45□□□□□ -1.7
CLCN3-203ENST00000502998 SND1-IT1Q9HBX3 110 aa4.45□□□□□ -1.7
CLCN3-203ENST00000502998 NDUFA4L2Q9NRX3 87 aa4.45□□□□□ -1.7
CLCN3-203ENST00000502998 LYNX1G3V0Z9 82 aa4.44□□□□□ -1.7
CLCN3-203ENST00000502998 H3BRN7 92 aa4.44□□□□□ -1.7
CLCN3-203ENST00000502998 LYNX1P0DP58 116 aa4.44□□□□□ -1.7
CLCN3-203ENST00000502998 POLR2KP53803 58 aaKnown RBP4.44□□□□□ -1.7
CLCN3-203ENST00000502998 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
CLCN3-203ENST00000502998 VWFP04275 2813 aa4.44□□□□□ -1.7
CLCN3-203ENST00000502998 IGKV2-29A2NJV5 120 aaPredicted RBP4.43□□□□□ -1.7
CLCN3-203ENST00000502998 B4DSR2 109 aa4.43□□□□□ -1.7
CLCN3-203ENST00000502998 REG3AQ06141 175 aa4.43□□□□□ -1.7
CLCN3-203ENST00000502998 C9orf66Q5T8R8 295 aa4.43□□□□□ -1.7
CLCN3-203ENST00000502998 Q6ZQT0 140 aa4.43□□□□□ -1.7
CLCN3-203ENST00000502998 RPL36ALQ969Q0 106 aaKnown RBP4.43□□□□□ -1.7
CLCN3-203ENST00000502998 B9D2Q9BPU9 175 aa4.43□□□□□ -1.7
CLCN3-203ENST00000502998 FGF23Q9GZV9 251 aaPredicted RBP4.43□□□□□ -1.7
CLCN3-203ENST00000502998 CMYA5Q8N3K9 4069 aa4.42□□□□□ -1.7
CLCN3-203ENST00000502998 A0A087WYN8 130 aa4.42□□□□□ -1.7
CLCN3-203ENST00000502998 IGHV7-4-1A0A0J9YVY3 117 aa4.42□□□□□ -1.7
CLCN3-203ENST00000502998 LECT2O14960 151 aa4.42□□□□□ -1.7
CLCN3-203ENST00000502998 FSHBP01225 129 aa4.42□□□□□ -1.7
CLCN3-203ENST00000502998 IGHV3-43DP0DP04 118 aa4.42□□□□□ -1.7
CLCN3-203ENST00000502998 RNASE13Q5GAN3 156 aaKnown RBP4.42□□□□□ -1.7
CLCN3-203ENST00000502998 LINC00208Q96KT6 92 aa4.42□□□□□ -1.7
CLCN3-203ENST00000502998 KRTAP9-8Q9BYQ0 159 aa4.42□□□□□ -1.7
CLCN3-203ENST00000502998 IGHV3-64A0A075B6Q5 118 aa4.41□□□□□ -1.7
CLCN3-203ENST00000502998 K7EQD1 137 aa4.41□□□□□ -1.7
CLCN3-203ENST00000502998 C20orf203Q8NBC4 194 aa4.41□□□□□ -1.7
CLCN3-203ENST00000502998 KLK9Q9UKQ9 250 aa4.41□□□□□ -1.7
CLCN3-203ENST00000502998 LINC01558Q9Y6Z2 57 aa4.41□□□□□ -1.7
CLCN3-203ENST00000502998 WNK2Q9Y3S1 2297 aa4.41□□□□□ -1.7
CLCN3-203ENST00000502998 KMT2CQ8NEZ4 4911 aaKnown RBP4.4□□□□□ -1.7
CLCN3-203ENST00000502998 IGHV3-73A0A0B4J1V6 119 aa4.4□□□□□ -1.71
CLCN3-203ENST00000502998 TFF1P04155 84 aa4.4□□□□□ -1.71
CLCN3-203ENST00000502998 MSMBP08118 114 aa4.4□□□□□ -1.71
CLCN3-203ENST00000502998 LYZP61626 148 aa4.4□□□□□ -1.71
CLCN3-203ENST00000502998 C1orf134Q5TEV5 83 aa4.4□□□□□ -1.71
CLCN3-203ENST00000502998 TMEM167AQ8TBQ9 72 aa4.4□□□□□ -1.71
CLCN3-203ENST00000502998 RPL39LQ96EH5 51 aaKnown RBP4.4□□□□□ -1.71
CLCN3-203ENST00000502998 MUC4Q99102 2169 aa4.39□□□□□ -1.71
CLCN3-203ENST00000502998 IGLV4-3A0A075B6K6 122 aa4.39□□□□□ -1.71
CLCN3-203ENST00000502998 IGHV3-35A0A0C4DH35 117 aa4.39□□□□□ -1.71
CLCN3-203ENST00000502998 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
CLCN3-203ENST00000502998 RTL8CO15255 209 aa4.39□□□□□ -1.71
CLCN3-203ENST00000502998 SMIM11BQ8TCY0 68 aa4.39□□□□□ -1.71
CLCN3-203ENST00000502998 PLAC8Q9NZF1 115 aa4.39□□□□□ -1.71
CLCN3-203ENST00000502998 IGHV3-49A0A0A0MS15 119 aa4.38□□□□□ -1.71
CLCN3-203ENST00000502998 ATP6V0E1O15342 81 aa4.38□□□□□ -1.71
CLCN3-203ENST00000502998 IGHV1-46P01743 117 aa4.38□□□□□ -1.71
CLCN3-203ENST00000502998 ROMO1P60602 79 aa4.38□□□□□ -1.71
CLCN3-203ENST00000502998 CNBPP62633 177 aaKnown RBP4.38□□□□□ -1.71
CLCN3-203ENST00000502998 RPL39P62891 51 aaKnown RBP4.38□□□□□ -1.71
CLCN3-203ENST00000502998 LENEPQ9Y5L5 61 aa4.38□□□□□ -1.71
CLCN3-203ENST00000502998 NOTCH3Q9UM47 2321 aa4.38□□□□□ -1.71
CLCN3-203ENST00000502998 IGHV3OR16-12A0A075B7B8 117 aa4.37□□□□□ -1.71
CLCN3-203ENST00000502998 IGLV5-45A0A087WSX0 123 aa4.37□□□□□ -1.71
CLCN3-203ENST00000502998 IGKV2-40A0A087WW87 121 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-203ENST00000502998 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
CLCN3-203ENST00000502998 IGKV2D-40P01614 121 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-203ENST00000502998 RPL39P5Q59GN2 51 aa4.37□□□□□ -1.71
CLCN3-203ENST00000502998 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
CLCN3-203ENST00000502998 IGHV3-43A0A0B4J1X8 118 aa4.36□□□□□ -1.71
CLCN3-203ENST00000502998 IGLV5-39A0A0G2JS06 123 aa4.36□□□□□ -1.71
CLCN3-203ENST00000502998 H3BPC8 53 aa4.36□□□□□ -1.71
CLCN3-203ENST00000502998 IGHV3-48P01763 117 aa4.36□□□□□ -1.71
CLCN3-203ENST00000502998 IGKV4-1P06312 121 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms