RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 LRP1BQ9NZR2 4599 aa3.61□□□□□ -1.83
HTT-202ENST00000502820 SMIM26A0A096LP01 95 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 IGLV5-39A0A0G2JS06 123 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 FAM236DA0A1B0GTK5 79 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 USP17L23D6RBM5 183 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 F5H697 171 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 CRPP02741 224 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 FAM236CP0DP71 79 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 PRB4P10163 310 aaPredicted RBP3.6□□□□□ -1.83
HTT-202ENST00000502820 RPL39P62891 51 aaKnown RBP3.6□□□□□ -1.83
HTT-202ENST00000502820 STHQ8IWL8 128 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 Q8NAQ8 132 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 LINC00308Q8TCZ7 52 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 SMCR5Q8TEV8 140 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 CLEC2BQ92478 149 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 JPT2Q9H910 190 aa3.6□□□□□ -1.83
HTT-202ENST00000502820 APOBP04114 4563 aaKnown RBP3.6□□□□□ -1.83
HTT-202ENST00000502820 IGHV3OR16-12A0A075B7B8 117 aa3.59□□□□□ -1.83
HTT-202ENST00000502820 A0A0J9YXV3 536 aa3.59□□□□□ -1.83
HTT-202ENST00000502820 NBDYA0A0U1RRE5 68 aa3.59□□□□□ -1.83
HTT-202ENST00000502820 GHRHP01286 108 aa3.59□□□□□ -1.83
HTT-202ENST00000502820 MIFP14174 115 aa3.59□□□□□ -1.83
HTT-202ENST00000502820 KLKP1Q107X0 134 aa3.59□□□□□ -1.83
HTT-202ENST00000502820 PRR9Q5T870 116 aa3.59□□□□□ -1.83
HTT-202ENST00000502820 Q5XG85 94 aa3.59□□□□□ -1.83
HTT-202ENST00000502820 UBE2D4Q9Y2X8 147 aa3.59□□□□□ -1.83
HTT-202ENST00000502820 DNAH17Q9UFH2 4485 aa3.59□□□□□ -1.84
HTT-202ENST00000502820 TRAV7A0A075B6U4 112 aa3.58□□□□□ -1.84
HTT-202ENST00000502820 IGHV3-16A0A0C4DH30 117 aa3.58□□□□□ -1.84
HTT-202ENST00000502820 KNCNA6PVL3 124 aa3.58□□□□□ -1.84
HTT-202ENST00000502820 PDE6GP18545 87 aa3.58□□□□□ -1.84
HTT-202ENST00000502820 SNRPD3P62318 126 aaKnown RBP3.58□□□□□ -1.84
HTT-202ENST00000502820 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
HTT-202ENST00000502820 LYPD5Q6UWN5 251 aa3.58□□□□□ -1.84
HTT-202ENST00000502820 CSNK1G2-AS1Q8NCQ2 148 aa3.58□□□□□ -1.84
HTT-202ENST00000502820 LINC00467Q9BRT7 94 aa3.58□□□□□ -1.84
HTT-202ENST00000502820 X6R8D5 127 aa3.58□□□□□ -1.84
HTT-202ENST00000502820 IGHV1OR15-1A0A075B7D0 117 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 A8MTW9 85 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 ERC2-IT1O76042 136 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 SPART-AS1P0CW21 52 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 PFN2P35080 140 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 ADAMTSL4-AS1Q5T5F5 129 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 IGFL4Q6B9Z1 124 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 DNAH5Q8TE73 4624 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 C20orf173Q96LM9 149 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 TMEM243Q9BU79 118 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 UBL5Q9BZL1 73 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 MYCBP2O75592 4640 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 DNAH6Q9C0G6 4158 aa3.57□□□□□ -1.84
HTT-202ENST00000502820 TMEM256-PLSCR3K7ERE1 68 aa3.56□□□□□ -1.84
HTT-202ENST00000502820 CCKP06307 115 aa3.56□□□□□ -1.84
HTT-202ENST00000502820 ZNF625Q96I27 306 aaPredicted RBP3.56□□□□□ -1.84
HTT-202ENST00000502820 LINC00167Q96N53 147 aa3.56□□□□□ -1.84
HTT-202ENST00000502820 ORMDL1Q9P0S3 153 aa3.56□□□□□ -1.84
HTT-202ENST00000502820 TRBV10-1A0A0K0K1A3 114 aa3.55□□□□□ -1.84
HTT-202ENST00000502820 GNRH2O43555 120 aa3.55□□□□□ -1.84
HTT-202ENST00000502820 CCL18P55774 89 aa3.55□□□□□ -1.84
HTT-202ENST00000502820 DEFB1P60022 68 aa3.55□□□□□ -1.84
HTT-202ENST00000502820 KRTAP10-1P60331 282 aa3.55□□□□□ -1.84
HTT-202ENST00000502820 Q9H8V8 135 aa3.55□□□□□ -1.84
HTT-202ENST00000502820 XCL2Q9UBD3 114 aa3.55□□□□□ -1.84
HTT-202ENST00000502820 FAT1Q14517 4588 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 SRRM2Q9UQ35 2752 aaKnown RBP3.54□□□□□ -1.84
HTT-202ENST00000502820 IGHV3-64A0A075B6Q5 118 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 A0A087WWL8 130 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 KRTAP29-1A8MX34 341 aaPredicted RBP3.54□□□□□ -1.84
HTT-202ENST00000502820 IBA57-AS1B1ANH7 110 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 RS1O15537 224 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 IGKV3-20P01619 116 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 IGHV3-53P01767 116 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 CXCL6P80162 114 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 FAM74A4Q5TZK3 123 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 DGAT2L7PQ6IED9 249 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 HRCT1Q6UXD1 115 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 LINC01561Q8N1V8 128 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 DSCR8Q96T75 97 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 CHCHD7Q9BUK0 85 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 LINC00846Q9NV44 126 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 V9GYY9 64 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
HTT-202ENST00000502820 SMIM1B2RUZ4 78 aa3.53□□□□□ -1.84
HTT-202ENST00000502820 F6UB75 175 aa3.53□□□□□ -1.84
HTT-202ENST00000502820 PLA2G1BP04054 148 aaKnown RBP3.53□□□□□ -1.84
HTT-202ENST00000502820 XCL1P47992 114 aa3.53□□□□□ -1.84
HTT-202ENST00000502820 DAD1P61803 113 aa3.53□□□□□ -1.84
HTT-202ENST00000502820 C1orf158Q8N1D5 194 aa3.53□□□□□ -1.84
HTT-202ENST00000502820 DEFB104AQ8WTQ1 72 aa3.53□□□□□ -1.84
HTT-202ENST00000502820 CDKN2A-AS1Q9UH64 79 aa3.53□□□□□ -1.84
HTT-202ENST00000502820 C22orf24Q9Y442 160 aa3.53□□□□□ -1.84
HTT-202ENST00000502820 FLG2Q5D862 2391 aaPredicted RBP3.53□□□□□ -1.84
HTT-202ENST00000502820 LOC110117498A0A087WWA1 95 aa3.52□□□□□ -1.85
HTT-202ENST00000502820 TRAV12-3A0A0B4J271 114 aa3.52□□□□□ -1.85
HTT-202ENST00000502820 H7BZZ5 65 aa3.52□□□□□ -1.85
HTT-202ENST00000502820 DEFB130BP0DP73 79 aa3.52□□□□□ -1.85
HTT-202ENST00000502820 DEFB130AP0DP74 79 aa3.52□□□□□ -1.85
HTT-202ENST00000502820 FHL2Q14192 279 aa3.52□□□□□ -1.85
HTT-202ENST00000502820 C4orf26Q17RF5 130 aa3.52□□□□□ -1.85
HTT-202ENST00000502820 FAM104AQ969W3 186 aa3.52□□□□□ -1.85
HTT-202ENST00000502820 OPRPNQ99935 248 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms