RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 LINC00173Q6ZV60 143 aa4.22□□□□□ -1.73
SH3RF1-202ENST00000502315 ERASQ7Z444 233 aa4.22□□□□□ -1.73
SH3RF1-202ENST00000502315 GEMIN7Q9H840 131 aaKnown RBP4.22□□□□□ -1.73
SH3RF1-202ENST00000502315 IGLV5-45A0A087WSX0 123 aa4.21□□□□□ -1.74
SH3RF1-202ENST00000502315 TINCRA0A1B0GVN0 87 aa4.21□□□□□ -1.74
SH3RF1-202ENST00000502315 C5orf52A6NGY3 159 aa4.21□□□□□ -1.74
SH3RF1-202ENST00000502315 S100A6P06703 90 aa4.21□□□□□ -1.74
SH3RF1-202ENST00000502315 TPRXLQ17RH7 258 aa4.21□□□□□ -1.74
SH3RF1-202ENST00000502315 SFTA2Q6UW10 78 aa4.21□□□□□ -1.74
SH3RF1-202ENST00000502315 TOMM6Q96B49 74 aa4.21□□□□□ -1.74
SH3RF1-202ENST00000502315 TOMM7Q9P0U1 55 aa4.21□□□□□ -1.74
SH3RF1-202ENST00000502315 LINC00310P59036 64 aa4.2□□□□□ -1.74
SH3RF1-202ENST00000502315 SPAG11AQ6PDA7 123 aa4.2□□□□□ -1.74
SH3RF1-202ENST00000502315 CDKN2A-AS1Q9UH64 79 aa4.2□□□□□ -1.74
SH3RF1-202ENST00000502315 A0A087X002 238 aa4.19□□□□□ -1.74
SH3RF1-202ENST00000502315 LOC389332A0A1B0GUA5 103 aa4.19□□□□□ -1.74
SH3RF1-202ENST00000502315 LINC01546A6NGU7 62 aa4.19□□□□□ -1.74
SH3RF1-202ENST00000502315 COX17Q14061 63 aa4.19□□□□□ -1.74
SH3RF1-202ENST00000502315 COA6Q5JTJ3 125 aaKnown RBP4.19□□□□□ -1.74
SH3RF1-202ENST00000502315 KRTAP13-1Q8IUC0 172 aa4.19□□□□□ -1.74
SH3RF1-202ENST00000502315 HIST3H2BBQ8N257 126 aa4.19□□□□□ -1.74
SH3RF1-202ENST00000502315 LINC00167Q96N53 147 aa4.19□□□□□ -1.74
SH3RF1-202ENST00000502315 XAGE1AQ9HD64 81 aa4.19□□□□□ -1.74
SH3RF1-202ENST00000502315 IGKV2D-26A0A0A0MRZ7 120 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 SMIM1B2RUZ4 78 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 H3BRM9 83 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 SERF1AO75920 110 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 UBE2AP49459 152 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 AKR1D1P51857 326 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 RPL24P83731 157 aaKnown RBP4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 BAGE3Q86Y29 109 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 LINC00469Q8N7U9 141 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 LINC00304Q8N9R0 145 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 NKAPP1Q8N9T2 125 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 C18orf32Q8TCD1 76 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 COX7B2Q8TF08 81 aa4.18□□□□□ -1.74
SH3RF1-202ENST00000502315 ATP5LO75964 103 aa4.17□□□□□ -1.74
SH3RF1-202ENST00000502315 TSPAN13O95857 204 aa4.17□□□□□ -1.74
SH3RF1-202ENST00000502315 FP248Q71RG6 208 aaPredicted RBP4.17□□□□□ -1.74
SH3RF1-202ENST00000502315 URB1-AS1Q96HZ7 61 aa4.17□□□□□ -1.74
SH3RF1-202ENST00000502315 SCGB3A1Q96QR1 104 aa4.17□□□□□ -1.74
SH3RF1-202ENST00000502315 FABP4P15090 132 aa4.16□□□□□ -1.74
SH3RF1-202ENST00000502315 S100A2P29034 98 aa4.16□□□□□ -1.74
SH3RF1-202ENST00000502315 PMVKQ15126 192 aa4.16□□□□□ -1.74
SH3RF1-202ENST00000502315 HIST1H2BLQ99880 126 aa4.16□□□□□ -1.74
SH3RF1-202ENST00000502315 CDIP1Q9H305 208 aa4.16□□□□□ -1.74
SH3RF1-202ENST00000502315 CST9LQ9H4G1 147 aa4.16□□□□□ -1.74
SH3RF1-202ENST00000502315 IGLV7-46A0A075B6I9 117 aa4.15□□□□□ -1.75
SH3RF1-202ENST00000502315 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
SH3RF1-202ENST00000502315 KRTAP13-2Q52LG2 175 aa4.15□□□□□ -1.75
SH3RF1-202ENST00000502315 ZC2HC1BQ5TFG8 222 aa4.15□□□□□ -1.75
SH3RF1-202ENST00000502315 IGLV5-39A0A0G2JS06 123 aa4.14□□□□□ -1.75
SH3RF1-202ENST00000502315 RPL37AP8A6NKH3 93 aa4.14□□□□□ -1.75
SH3RF1-202ENST00000502315 FAM19A2Q8N3H0 131 aa4.14□□□□□ -1.75
SH3RF1-202ENST00000502315 PLEKHB2Q96CS7 222 aa4.14□□□□□ -1.75
SH3RF1-202ENST00000502315 ZNF706Q9Y5V0 76 aaPredicted RBP4.14□□□□□ -1.75
SH3RF1-202ENST00000502315 HSBP1O75506 76 aa4.13□□□□□ -1.75
SH3RF1-202ENST00000502315 IGLC3P0DOY3 106 aa4.13□□□□□ -1.75
SH3RF1-202ENST00000502315 VPREB1P12018 145 aa4.13□□□□□ -1.75
SH3RF1-202ENST00000502315 PMCHL1Q16048 86 aa4.13□□□□□ -1.75
SH3RF1-202ENST00000502315 FA2HQ7L5A8 372 aa4.13□□□□□ -1.75
SH3RF1-202ENST00000502315 TMEM126AQ9H061 195 aa4.13□□□□□ -1.75
SH3RF1-202ENST00000502315 MUC17Q685J3 4493 aa4.13□□□□□ -1.75
SH3RF1-202ENST00000502315 LINC00587B1AMM8 73 aa4.12□□□□□ -1.75
SH3RF1-202ENST00000502315 SPINK1P00995 79 aa4.12□□□□□ -1.75
SH3RF1-202ENST00000502315 LINC00614P0C842 121 aa4.12□□□□□ -1.75
SH3RF1-202ENST00000502315 RPS29P62273 56 aaKnown RBP4.12□□□□□ -1.75
SH3RF1-202ENST00000502315 PYY3Q5JQD4 70 aa4.12□□□□□ -1.75
SH3RF1-202ENST00000502315 LINC00518Q8N0U6 118 aa4.12□□□□□ -1.75
SH3RF1-202ENST00000502315 CHCHD1Q96BP2 118 aaKnown RBP4.12□□□□□ -1.75
SH3RF1-202ENST00000502315 KRTAP9-8Q9BYQ0 159 aa4.12□□□□□ -1.75
SH3RF1-202ENST00000502315 PPDPFQ9H3Y8 114 aa4.12□□□□□ -1.75
SH3RF1-202ENST00000502315 A0A096LNJ9 63 aa4.11□□□□□ -1.75
SH3RF1-202ENST00000502315 GAGE10A6NGK3 116 aa4.11□□□□□ -1.75
SH3RF1-202ENST00000502315 M0R378 163 aa4.11□□□□□ -1.75
SH3RF1-202ENST00000502315 FAM19A1Q7Z5A9 133 aa4.11□□□□□ -1.75
SH3RF1-202ENST00000502315 C12orf57Q99622 126 aa4.11□□□□□ -1.75
SH3RF1-202ENST00000502315 SND1-IT1Q9HBX3 110 aa4.11□□□□□ -1.75
SH3RF1-202ENST00000502315 ERG28Q9UKR5 140 aa4.11□□□□□ -1.75
SH3RF1-202ENST00000502315 IGKV2-28A0A075B6P5 120 aa4.1□□□□□ -1.75
SH3RF1-202ENST00000502315 IGKV2D-28P01615 120 aa4.1□□□□□ -1.75
SH3RF1-202ENST00000502315 SPINK8P0C7L1 97 aa4.1□□□□□ -1.75
SH3RF1-202ENST00000502315 SMIM6P0DI80 62 aa4.1□□□□□ -1.75
SH3RF1-202ENST00000502315 KRTDAPP60985 99 aa4.1□□□□□ -1.75
SH3RF1-202ENST00000502315 ASB16-AS1Q495Z4 193 aa4.1□□□□□ -1.75
SH3RF1-202ENST00000502315 LINC00337Q8N6G1 96 aa4.1□□□□□ -1.75
SH3RF1-202ENST00000502315 ANAPC11Q9NYG5 84 aa4.1□□□□□ -1.75
SH3RF1-202ENST00000502315 EIF4EBP3O60516 100 aaPredicted RBP4.09□□□□□ -1.75
SH3RF1-202ENST00000502315 HBDP02042 147 aa4.09□□□□□ -1.75
SH3RF1-202ENST00000502315 C3orf79P0CE67 100 aa4.09□□□□□ -1.75
SH3RF1-202ENST00000502315 PFN2P35080 140 aa4.09□□□□□ -1.75
SH3RF1-202ENST00000502315 SEC61BP60468 96 aaKnown RBP4.09□□□□□ -1.75
SH3RF1-202ENST00000502315 S100A12P80511 92 aa4.09□□□□□ -1.75
SH3RF1-202ENST00000502315 JOSD1Q15040 202 aaPredicted RBP4.09□□□□□ -1.75
SH3RF1-202ENST00000502315 SSBP3-AS1Q7Z2R9 100 aa4.09□□□□□ -1.75
SH3RF1-202ENST00000502315 SPRR4Q96PI1 79 aa4.09□□□□□ -1.75
SH3RF1-202ENST00000502315 NDUFA12Q9UI09 145 aa4.09□□□□□ -1.75
SH3RF1-202ENST00000502315 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
SH3RF1-202ENST00000502315 PRYO14603 147 aa4.08□□□□□ -1.76
SH3RF1-202ENST00000502315 LEPROTL1O95214 131 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms