RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	XAGE1A	Q9HD64	81 aa		14.23	□□□□□ -0.13
RAP1B-213	ENST00000501412	GAGE2D	Q9UEU5	116 aa		14.23	□□□□□ -0.13
RAP1B-213	ENST00000501412		A0A096LNI7	61 aa		14.22	□□□□□ -0.13
RAP1B-213	ENST00000501412	C16orf90	A8MZG2	172 aa		14.22	□□□□□ -0.13
RAP1B-213	ENST00000501412	GCSH	P23434	173 aa		14.21	□□□□□ -0.13
RAP1B-213	ENST00000501412	CEND1	Q8N111	149 aa		14.21	□□□□□ -0.13
RAP1B-213	ENST00000501412	GAGE2B	Q13066	116 aa		14.2	□□□□□ -0.14
RAP1B-213	ENST00000501412		Q8NDZ9	215 aa		14.19	□□□□□ -0.14
RAP1B-213	ENST00000501412	PKIG	Q9Y2B9	76 aa		14.19	□□□□□ -0.14
RAP1B-213	ENST00000501412	DNAH5	Q8TE73	4624 aa		14.19	□□□□□ -0.14
RAP1B-213	ENST00000501412	PCP4L1	A6NKN8	68 aa		14.18	□□□□□ -0.14
RAP1B-213	ENST00000501412	PANO1	I0J062	215 aa		14.17	□□□□□ -0.14
RAP1B-213	ENST00000501412	CHTF8	P0CG12	524 aa		14.17	□□□□□ -0.14
RAP1B-213	ENST00000501412	FXYD2	P54710	66 aa		14.17	□□□□□ -0.14
RAP1B-213	ENST00000501412	COPS9	Q8WXC6	57 aa		14.16	□□□□□ -0.14
RAP1B-213	ENST00000501412	IGKV2-24	A0A0C4DH68	120 aa		14.15	□□□□□ -0.14
RAP1B-213	ENST00000501412	BVES-AS1	Q5T3Y7	98 aa		14.15	□□□□□ -0.14
RAP1B-213	ENST00000501412	KRTAP7-1	Q8IUC3	87 aa		14.14	□□□□□ -0.15
RAP1B-213	ENST00000501412	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	14.14	□□□□□ -0.15
RAP1B-213	ENST00000501412		A4D1N5	150 aa		14.13	□□□□□ -0.15
RAP1B-213	ENST00000501412	RPL24	P83731	157 aa	Known RBP	14.13	□□□□□ -0.15
RAP1B-213	ENST00000501412	PLA2G2D	Q9UNK4	145 aa		14.13	□□□□□ -0.15
RAP1B-213	ENST00000501412	HINT1	P49773	126 aa	Predicted RBP	14.12	□□□□□ -0.15
RAP1B-213	ENST00000501412	KRTAP10-1	P60331	282 aa		14.12	□□□□□ -0.15
RAP1B-213	ENST00000501412	SPACA4	Q8TDM5	124 aa		14.12	□□□□□ -0.15
RAP1B-213	ENST00000501412	FAM168B	A1KXE4	195 aa		14.12	□□□□□ -0.15
RAP1B-213	ENST00000501412	NDUFC2	O95298	119 aa		14.12	□□□□□ -0.15
RAP1B-213	ENST00000501412	VPREB1	P12018	145 aa		14.12	□□□□□ -0.15
RAP1B-213	ENST00000501412	SERTAD4-AS1	Q5TG53	156 aa		14.12	□□□□□ -0.15
RAP1B-213	ENST00000501412	LINC00474	Q9P2X8	69 aa		14.12	□□□□□ -0.15
RAP1B-213	ENST00000501412	PKHD1	P08F94	4074 aa		14.11	□□□□□ -0.15
RAP1B-213	ENST00000501412	IGKV2-28	A0A075B6P5	120 aa		14.1	□□□□□ -0.15
RAP1B-213	ENST00000501412	IGKV2D-28	P01615	120 aa		14.1	□□□□□ -0.15
RAP1B-213	ENST00000501412		A0A1W2PNN7	141 aa		14.09	□□□□□ -0.15
RAP1B-213	ENST00000501412		M0R143	59 aa		14.09	□□□□□ -0.15
RAP1B-213	ENST00000501412	PRR3	P79522	188 aa	Known RBP	14.09	□□□□□ -0.15
RAP1B-213	ENST00000501412		Q6ZSA8	131 aa		14.08	□□□□□ -0.16
RAP1B-213	ENST00000501412	IGLV5-37	A0A075B6J1	123 aa		14.07	□□□□□ -0.16
RAP1B-213	ENST00000501412	EPM2A	B3EWF7	344 aa		14.07	□□□□□ -0.16
RAP1B-213	ENST00000501412	FAM30A	Q9NZY2	134 aa		14.07	□□□□□ -0.16
RAP1B-213	ENST00000501412	CFC1B	P0CG36	223 aa		14.06	□□□□□ -0.16
RAP1B-213	ENST00000501412	CFC1	P0CG37	223 aa		14.06	□□□□□ -0.16
RAP1B-213	ENST00000501412	TMEM238L	A0A1B0GVL6	79 aa		14.06	□□□□□ -0.16
RAP1B-213	ENST00000501412		A6NJY4	79 aa		14.06	□□□□□ -0.16
RAP1B-213	ENST00000501412		A0A1B0GWB2	263 aa		14.05	□□□□□ -0.16
RAP1B-213	ENST00000501412	SNHG12	Q9BXW3	62 aa		14.05	□□□□□ -0.16
RAP1B-213	ENST00000501412	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	14.04	□□□□□ -0.16
RAP1B-213	ENST00000501412	LINC00337	Q8N6G1	96 aa		14.04	□□□□□ -0.16
RAP1B-213	ENST00000501412	TRBV10-2	A0A0K0K1G8	114 aa		14.03	□□□□□ -0.16
RAP1B-213	ENST00000501412	NCR3	O14931	201 aa		14.03	□□□□□ -0.16
RAP1B-213	ENST00000501412	NHP2	Q9NX24	153 aa	Known RBP	14.03	□□□□□ -0.16
RAP1B-213	ENST00000501412	DNAH8	Q96JB1	4490 aa		14.03	□□□□□ -0.16
RAP1B-213	ENST00000501412		A0A087WYN8	130 aa		14.02	□□□□□ -0.16
RAP1B-213	ENST00000501412		A0A0B4J2C4	111 aa		14.02	□□□□□ -0.16
RAP1B-213	ENST00000501412	C22orf24	Q9Y442	160 aa		14.01	□□□□□ -0.17
RAP1B-213	ENST00000501412	PLAC8	Q9NZF1	115 aa		14	□□□□□ -0.17
RAP1B-213	ENST00000501412		K7ERJ3	54 aa		13.99	□□□□□ -0.17
RAP1B-213	ENST00000501412		M0R378	163 aa		13.99	□□□□□ -0.17
RAP1B-213	ENST00000501412	BATF	Q16520	125 aa		13.99	□□□□□ -0.17
RAP1B-213	ENST00000501412	LRP1B	Q9NZR2	4599 aa		13.99	□□□□□ -0.17
RAP1B-213	ENST00000501412	NKAPP1	Q8N9T2	125 aa		13.99	□□□□□ -0.17
RAP1B-213	ENST00000501412	C7orf33	Q8WU49	177 aa		13.98	□□□□□ -0.17
RAP1B-213	ENST00000501412	DYNC1H1	Q14204	4646 aa	Known RBP	13.97	□□□□□ -0.17
RAP1B-213	ENST00000501412		M0QXV9	152 aa		13.97	□□□□□ -0.17
RAP1B-213	ENST00000501412	DPH3	Q96FX2	82 aa		13.97	□□□□□ -0.17
RAP1B-213	ENST00000501412	TRAV13-2	A0A0B4J235	113 aa		13.96	□□□□□ -0.17
RAP1B-213	ENST00000501412		A6NDN8	102 aa		13.96	□□□□□ -0.17
RAP1B-213	ENST00000501412	IGLV6-57	P01721	117 aa		13.96	□□□□□ -0.17
RAP1B-213	ENST00000501412	MRPL55	Q7Z7F7	128 aa	Known RBP	13.96	□□□□□ -0.17
RAP1B-213	ENST00000501412	RAB37	Q96AX2	223 aa		13.95	□□□□□ -0.18
RAP1B-213	ENST00000501412	CIRBP-AS1	Q8TBR5	109 aa		13.94	□□□□□ -0.18
RAP1B-213	ENST00000501412	LINC00167	Q96N53	147 aa		13.94	□□□□□ -0.18
RAP1B-213	ENST00000501412	PRO1854	Q9UHT4	67 aa		13.94	□□□□□ -0.18
RAP1B-213	ENST00000501412	TRBV10-3	A0A0K0K1G6	114 aa		13.93	□□□□□ -0.18
RAP1B-213	ENST00000501412	SCX	Q7RTU7	201 aa		13.93	□□□□□ -0.18
RAP1B-213	ENST00000501412	PHF5A	Q7RTV0	110 aa	Known RBP	13.93	□□□□□ -0.18
RAP1B-213	ENST00000501412	GAGE10	A6NGK3	116 aa		13.93	□□□□□ -0.18
RAP1B-213	ENST00000501412	RPL13A	P40429	203 aa	Known RBP	13.92	□□□□□ -0.18
RAP1B-213	ENST00000501412	TMEM126A	Q9H061	195 aa		13.92	□□□□□ -0.18
RAP1B-213	ENST00000501412	S100A7L2	Q5SY68	101 aa		13.91	□□□□□ -0.18
RAP1B-213	ENST00000501412	OR13C6P	Q8NH95	151 aa		13.91	□□□□□ -0.18
RAP1B-213	ENST00000501412	IGLV1-50	A0A075B6I6	118 aa		13.9	□□□□□ -0.18
RAP1B-213	ENST00000501412	LBH	Q53QV2	105 aa	Predicted RBP	13.89	□□□□□ -0.19
RAP1B-213	ENST00000501412	KRTAP11-1	Q8IUC1	163 aa		13.89	□□□□□ -0.19
RAP1B-213	ENST00000501412	RPL37AP8	A6NKH3	93 aa		13.88	□□□□□ -0.19
RAP1B-213	ENST00000501412	HAMP	P81172	84 aa		13.88	□□□□□ -0.19
RAP1B-213	ENST00000501412	KIAA1109	Q2LD37	5005 aa		13.87	□□□□□ -0.19
RAP1B-213	ENST00000501412	HERC2	O95714	4834 aa		13.87	□□□□□ -0.19
RAP1B-213	ENST00000501412	XG	P55808	180 aa		13.87	□□□□□ -0.19
RAP1B-213	ENST00000501412	KCNQ1DN	Q9H478	68 aa		13.87	□□□□□ -0.19
RAP1B-213	ENST00000501412	TSPAN13	O95857	204 aa		13.86	□□□□□ -0.19
RAP1B-213	ENST00000501412	COL5A1-AS1	Q5SY13	56 aa		13.86	□□□□□ -0.19
RAP1B-213	ENST00000501412	SMIM11B	Q8TCY0	68 aa		13.86	□□□□□ -0.19
RAP1B-213	ENST00000501412		H7C2G1	150 aa		13.85	□□□□□ -0.19
RAP1B-213	ENST00000501412	TAX1BP3	O14907	124 aa		13.85	□□□□□ -0.19
RAP1B-213	ENST00000501412	TRAV23DV6	A0A075B6W5	121 aa		13.83	□□□□□ -0.2
RAP1B-213	ENST00000501412	RPL28	P46779	137 aa	Known RBP	13.82	□□□□□ -0.2
RAP1B-213	ENST00000501412	PRY	O14603	147 aa		13.81	□□□□□ -0.2
RAP1B-213	ENST00000501412	APOB	P04114	4563 aa	Known RBP	13.81	□□□□□ -0.2
RAP1B-213	ENST00000501412	SPRR1A	P35321	89 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms