RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 LINC00694P0DN24 101 aa5.66□□□□□ -1.5
HLA-DMB-262ENST00000498020 CR1P17927 2039 aa5.66□□□□□ -1.5
HLA-DMB-262ENST00000498020 HRNRQ86YZ3 2850 aaPredicted RBP5.66□□□□□ -1.5
HLA-DMB-262ENST00000498020 CASC2Q6XLA1 102 aa5.65□□□□□ -1.5
HLA-DMB-262ENST00000498020 FHL2Q14192 279 aa5.65□□□□□ -1.5
HLA-DMB-262ENST00000498020 BSNQ9UPA5 3926 aa5.65□□□□□ -1.51
HLA-DMB-262ENST00000498020 TRBV30A0A0K0K1B3 111 aa5.65□□□□□ -1.51
HLA-DMB-262ENST00000498020 CCKP06307 115 aa5.65□□□□□ -1.51
HLA-DMB-262ENST00000498020 TEX49A0A1B0GTD5 131 aa5.64□□□□□ -1.51
HLA-DMB-262ENST00000498020 C20orf197Q8N268 126 aa5.64□□□□□ -1.51
HLA-DMB-262ENST00000498020 TRIAP1O43715 76 aa5.64□□□□□ -1.51
HLA-DMB-262ENST00000498020 LINC00959A0A1B0GUT2 108 aa5.63□□□□□ -1.51
HLA-DMB-262ENST00000498020 SMIM1B2RUZ4 78 aa5.63□□□□□ -1.51
HLA-DMB-262ENST00000498020 M0R378 163 aa5.63□□□□□ -1.51
HLA-DMB-262ENST00000498020 SLPIP03973 132 aa5.63□□□□□ -1.51
HLA-DMB-262ENST00000498020 Q6ZQY7 126 aa5.63□□□□□ -1.51
HLA-DMB-262ENST00000498020 NTM-AS1Q6ZSK4 140 aa5.63□□□□□ -1.51
HLA-DMB-262ENST00000498020 FAM229AH3BQW9 127 aa5.63□□□□□ -1.51
HLA-DMB-262ENST00000498020 COX6A2Q02221 97 aa5.63□□□□□ -1.51
HLA-DMB-262ENST00000498020 IGLV5-45A0A087WSX0 123 aa5.63□□□□□ -1.51
HLA-DMB-262ENST00000498020 DHRS4-AS1Q9P1J3 65 aa5.63□□□□□ -1.51
HLA-DMB-262ENST00000498020 ZNF706Q9Y5V0 76 aaPredicted RBP5.62□□□□□ -1.51
HLA-DMB-262ENST00000498020 NBEAL2Q6ZNJ1 2754 aa5.62□□□□□ -1.51
HLA-DMB-262ENST00000498020 IGKV2-28A0A075B6P5 120 aa5.62□□□□□ -1.51
HLA-DMB-262ENST00000498020 IGKV2D-28P01615 120 aa5.62□□□□□ -1.51
HLA-DMB-262ENST00000498020 C19orf73Q9NVV2 129 aa5.62□□□□□ -1.51
HLA-DMB-262ENST00000498020 PKD1L1Q8TDX9 2849 aa5.62□□□□□ -1.51
HLA-DMB-262ENST00000498020 LINC00526Q96FQ7 95 aa5.62□□□□□ -1.51
HLA-DMB-262ENST00000498020 DCHS2Q6V1P9 2916 aa5.62□□□□□ -1.51
HLA-DMB-262ENST00000498020 IGLV5-39A0A0G2JS06 123 aa5.61□□□□□ -1.51
HLA-DMB-262ENST00000498020 LOC107984640A0A0U1RRK4 108 aa5.61□□□□□ -1.51
HLA-DMB-262ENST00000498020 ADAMTSL4-AS1Q5T5F5 129 aa5.61□□□□□ -1.51
HLA-DMB-262ENST00000498020 SDIM1Q6ZPB5 146 aa5.61□□□□□ -1.51
HLA-DMB-262ENST00000498020 SCXQ7RTU7 201 aa5.61□□□□□ -1.51
HLA-DMB-262ENST00000498020 UQCRQO14949 82 aa5.61□□□□□ -1.51
HLA-DMB-262ENST00000498020 GIG44P09565 113 aaPredicted RBP5.61□□□□□ -1.51
HLA-DMB-262ENST00000498020 KRTAP10-11P60412 298 aa5.6□□□□□ -1.51
HLA-DMB-262ENST00000498020 CSNK1G2-AS1Q8NCQ2 148 aa5.6□□□□□ -1.51
HLA-DMB-262ENST00000498020 COX17Q14061 63 aa5.6□□□□□ -1.51
HLA-DMB-262ENST00000498020 ENHOQ6UWT2 76 aa5.6□□□□□ -1.51
HLA-DMB-262ENST00000498020 Q8IZM0 81 aa5.6□□□□□ -1.51
HLA-DMB-262ENST00000498020 LINC00474Q9P2X8 69 aa5.6□□□□□ -1.51
HLA-DMB-262ENST00000498020 IGLV4-60A0A075B6I1 120 aa5.6□□□□□ -1.51
HLA-DMB-262ENST00000498020 SPINK6Q6UWN8 80 aa5.6□□□□□ -1.51
HLA-DMB-262ENST00000498020 XGP55808 180 aa5.59□□□□□ -1.51
HLA-DMB-262ENST00000498020 C3orf22Q8N5N4 141 aa5.59□□□□□ -1.51
HLA-DMB-262ENST00000498020 PPDPFQ9H3Y8 114 aa5.59□□□□□ -1.51
HLA-DMB-262ENST00000498020 NDUFV3P56181 108 aaKnown RBP5.59□□□□□ -1.51
HLA-DMB-262ENST00000498020 WFDC10BQ8IUB3 73 aa5.58□□□□□ -1.52
HLA-DMB-262ENST00000498020 A0A1B0GUV1 79 aa5.58□□□□□ -1.52
HLA-DMB-262ENST00000498020 K7ERS5 55 aa5.58□□□□□ -1.52
HLA-DMB-262ENST00000498020 LST1O00453 97 aa5.58□□□□□ -1.52
HLA-DMB-262ENST00000498020 PLAC8L1A1L4L8 177 aa5.58□□□□□ -1.52
HLA-DMB-262ENST00000498020 ZNF73O43830 326 aaPredicted RBP5.58□□□□□ -1.52
HLA-DMB-262ENST00000498020 X6R8D5 127 aa5.58□□□□□ -1.52
HLA-DMB-262ENST00000498020 MT-ATP8P03928 68 aa5.58□□□□□ -1.52
HLA-DMB-262ENST00000498020 KRTAP10-3P60369 221 aa5.58□□□□□ -1.52
HLA-DMB-262ENST00000498020 FAM19A3Q7Z5A8 133 aa5.58□□□□□ -1.52
HLA-DMB-262ENST00000498020 CELA1Q9UNI1 258 aa5.58□□□□□ -1.52
HLA-DMB-262ENST00000498020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.57□□□□□ -1.52
HLA-DMB-262ENST00000498020 EGFEM1PQ0D2K5 195 aa5.57□□□□□ -1.52
HLA-DMB-262ENST00000498020 C6orf223Q8N319 242 aa5.57□□□□□ -1.52
HLA-DMB-262ENST00000498020 FLG2Q5D862 2391 aaPredicted RBP5.57□□□□□ -1.52
HLA-DMB-262ENST00000498020 FAM236DA0A1B0GTK5 79 aa5.57□□□□□ -1.52
HLA-DMB-262ENST00000498020 FAM236CP0DP71 79 aa5.57□□□□□ -1.52
HLA-DMB-262ENST00000498020 SMIM11BQ8TCY0 68 aa5.57□□□□□ -1.52
HLA-DMB-262ENST00000498020 PRO0461Q9UI25 63 aa5.57□□□□□ -1.52
HLA-DMB-262ENST00000498020 LITAFQ99732 161 aa5.56□□□□□ -1.52
HLA-DMB-262ENST00000498020 IGHV3OR16-9A0A0B4J2B5 98 aa5.56□□□□□ -1.52
HLA-DMB-262ENST00000498020 IMUPQ9GZP8 106 aa5.56□□□□□ -1.52
HLA-DMB-262ENST00000498020 ZANQ9Y493 2812 aa5.56□□□□□ -1.52
HLA-DMB-262ENST00000498020 RPL37AP8A6NKH3 93 aa5.55□□□□□ -1.52
HLA-DMB-262ENST00000498020 SMR3BP02814 79 aaPredicted RBP5.55□□□□□ -1.52
HLA-DMB-262ENST00000498020 WFDC13Q8IUB5 93 aa5.55□□□□□ -1.52
HLA-DMB-262ENST00000498020 Q8N9L7 120 aa5.55□□□□□ -1.52
HLA-DMB-262ENST00000498020 NDUFC1O43677 76 aa5.55□□□□□ -1.52
HLA-DMB-262ENST00000498020 LINC01561Q8N1V8 128 aa5.55□□□□□ -1.52
HLA-DMB-262ENST00000498020 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
HLA-DMB-262ENST00000498020 TENM3Q9P273 2699 aa5.55□□□□□ -1.52
HLA-DMB-262ENST00000498020 M0QXV9 152 aa5.55□□□□□ -1.52
HLA-DMB-262ENST00000498020 UNQ6190/PRO20217Q6UXQ8 127 aa5.55□□□□□ -1.52
HLA-DMB-262ENST00000498020 LINC00612Q8N6U2 182 aa5.54□□□□□ -1.52
HLA-DMB-262ENST00000498020 FAM104AQ969W3 186 aa5.54□□□□□ -1.52
HLA-DMB-262ENST00000498020 SPTSSBQ8NFR3 76 aa5.54□□□□□ -1.52
HLA-DMB-262ENST00000498020 FBN2P35556 2912 aa5.54□□□□□ -1.52
HLA-DMB-262ENST00000498020 RPL28P46779 137 aaKnown RBP5.53□□□□□ -1.52
HLA-DMB-262ENST00000498020 SERP2Q8N6R1 65 aa5.53□□□□□ -1.52
HLA-DMB-262ENST00000498020 IGLV9-49A0A0B4J1Y8 123 aa5.53□□□□□ -1.52
HLA-DMB-262ENST00000498020 WIPF1O43516 503 aa5.53□□□□□ -1.52
HLA-DMB-262ENST00000498020 SMCPP49901 116 aaPredicted RBP5.53□□□□□ -1.52
HLA-DMB-262ENST00000498020 V9GYY9 64 aa5.53□□□□□ -1.52
HLA-DMB-262ENST00000498020 ATP5EP56381 51 aaPredicted RBP5.52□□□□□ -1.53
HLA-DMB-262ENST00000498020 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
HLA-DMB-262ENST00000498020 NF1P21359 2839 aa5.52□□□□□ -1.53
HLA-DMB-262ENST00000498020 FAM240AA0A1B0GVK7 77 aa5.52□□□□□ -1.53
HLA-DMB-262ENST00000498020 HRCT1Q6UXD1 115 aa5.52□□□□□ -1.53
HLA-DMB-262ENST00000498020 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
HLA-DMB-262ENST00000498020 TENM2Q9NT68 2774 aa5.51□□□□□ -1.53
HLA-DMB-262ENST00000498020 MRPL55Q7Z7F7 128 aaKnown RBP5.51□□□□□ -1.53
HLA-DMB-262ENST00000498020 SPENQ96T58 3664 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms