RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 Q6ZVH6 145 aa3.51□□□□□ -1.85
MSH5-219ENST00000497269 TOMM7Q9P0U1 55 aa3.51□□□□□ -1.85
MSH5-219ENST00000497269 IGHV3OR16-9A0A0B4J2B5 98 aa3.5□□□□□ -1.85
MSH5-219ENST00000497269 COLCA2A8K830 154 aa3.5□□□□□ -1.85
MSH5-219ENST00000497269 S100A6P06703 90 aa3.5□□□□□ -1.85
MSH5-219ENST00000497269 CBLN2Q8IUK8 224 aa3.5□□□□□ -1.85
MSH5-219ENST00000497269 OR10D4PQ8NGN7 298 aa3.5□□□□□ -1.85
MSH5-219ENST00000497269 IMMP2LQ96T52 175 aa3.5□□□□□ -1.85
MSH5-219ENST00000497269 C12orf57Q99622 126 aa3.5□□□□□ -1.85
MSH5-219ENST00000497269 XAGE1AQ9HD64 81 aa3.5□□□□□ -1.85
MSH5-219ENST00000497269 MRPL35Q9NZE8 188 aaKnown RBP3.5□□□□□ -1.85
MSH5-219ENST00000497269 NAT8BQ9UHF3 227 aa3.5□□□□□ -1.85
MSH5-219ENST00000497269 CSDC2Q9Y534 153 aaKnown RBP3.5□□□□□ -1.85
MSH5-219ENST00000497269 RAB5AP20339 215 aa3.49□□□□□ -1.85
MSH5-219ENST00000497269 S100PP25815 95 aa3.49□□□□□ -1.85
MSH5-219ENST00000497269 AKR1D1P51857 326 aa3.49□□□□□ -1.85
MSH5-219ENST00000497269 HBBP68871 147 aa3.49□□□□□ -1.85
MSH5-219ENST00000497269 SMAGPQ0VAQ4 97 aa3.49□□□□□ -1.85
MSH5-219ENST00000497269 KIAA0087Q14695 138 aa3.49□□□□□ -1.85
MSH5-219ENST00000497269 RETNLBQ9BQ08 111 aa3.49□□□□□ -1.85
MSH5-219ENST00000497269 TIMM21Q9BVV7 248 aa3.49□□□□□ -1.85
MSH5-219ENST00000497269 SMIM2Q9BVW6 85 aa3.49□□□□□ -1.85
MSH5-219ENST00000497269 TGIF2-C20orf24A0A0A6YYL0 155 aa3.48□□□□□ -1.85
MSH5-219ENST00000497269 SMIM27A0A1W2PRY6 76 aa3.48□□□□□ -1.85
MSH5-219ENST00000497269 PPP1R2P9O14990 202 aa3.48□□□□□ -1.85
MSH5-219ENST00000497269 ZNF861PO60384 105 aa3.48□□□□□ -1.85
MSH5-219ENST00000497269 PPP1R17O96001 155 aa3.48□□□□□ -1.85
MSH5-219ENST00000497269 PACRGQ96M98 296 aaPredicted RBP3.48□□□□□ -1.85
MSH5-219ENST00000497269 C20orf78Q9BR46 151 aa3.48□□□□□ -1.85
MSH5-219ENST00000497269 PRO0461Q9UI25 63 aa3.48□□□□□ -1.85
MSH5-219ENST00000497269 C22orf24Q9Y442 160 aa3.48□□□□□ -1.85
MSH5-219ENST00000497269 TRBV24-1A0A075B6N3 115 aa3.47□□□□□ -1.85
MSH5-219ENST00000497269 IFI27P40305 119 aaPredicted RBP3.47□□□□□ -1.85
MSH5-219ENST00000497269 C6orf226Q5I0X4 101 aa3.47□□□□□ -1.85
MSH5-219ENST00000497269 TMEM136Q6ZRR5 245 aa3.47□□□□□ -1.85
MSH5-219ENST00000497269 PRELID3AQ96N28 172 aa3.47□□□□□ -1.85
MSH5-219ENST00000497269 SPANXA1Q9NS26 97 aa3.47□□□□□ -1.85
MSH5-219ENST00000497269 NAT8Q9UHE5 227 aa3.47□□□□□ -1.85
MSH5-219ENST00000497269 MUC2Q02817 5179 aa3.47□□□□□ -1.85
MSH5-219ENST00000497269 IGLV1-50A0A075B6I6 118 aa3.46□□□□□ -1.86
MSH5-219ENST00000497269 NDUFC2-KCTD14E9PQ53 114 aa3.46□□□□□ -1.86
MSH5-219ENST00000497269 TLX1NBP0CAT3 122 aa3.46□□□□□ -1.86
MSH5-219ENST00000497269 CKS1BP61024 79 aa3.46□□□□□ -1.86
MSH5-219ENST00000497269 MRPS36P82909 103 aaKnown RBP3.46□□□□□ -1.86
MSH5-219ENST00000497269 TEX43Q6ZNM6 134 aa3.46□□□□□ -1.86
MSH5-219ENST00000497269 TMEM141Q96I45 108 aa3.46□□□□□ -1.86
MSH5-219ENST00000497269 YPEL4Q96NS1 127 aa3.46□□□□□ -1.86
MSH5-219ENST00000497269 PPDPFQ9H3Y8 114 aa3.46□□□□□ -1.86
MSH5-219ENST00000497269 A0A0J9YXY3 114 aa3.45□□□□□ -1.86
MSH5-219ENST00000497269 A0A1B0GXF2 115 aa3.45□□□□□ -1.86
MSH5-219ENST00000497269 S100A2P29034 98 aa3.45□□□□□ -1.86
MSH5-219ENST00000497269 LINC00173Q6ZV60 143 aa3.45□□□□□ -1.86
MSH5-219ENST00000497269 ORMDL3Q8N138 153 aa3.45□□□□□ -1.86
MSH5-219ENST00000497269 MTURNQ8N3F0 131 aa3.45□□□□□ -1.86
MSH5-219ENST00000497269 VCX2Q9H322 139 aa3.45□□□□□ -1.86
MSH5-219ENST00000497269 TRBV30A0A0K0K1B3 111 aa3.44□□□□□ -1.86
MSH5-219ENST00000497269 F8WDY8 70 aa3.44□□□□□ -1.86
MSH5-219ENST00000497269 FABP9Q0Z7S8 132 aa3.44□□□□□ -1.86
MSH5-219ENST00000497269 COA6Q5JTJ3 125 aaKnown RBP3.44□□□□□ -1.86
MSH5-219ENST00000497269 Q6ZN92 141 aa3.44□□□□□ -1.86
MSH5-219ENST00000497269 MAP1LC3AQ9H492 121 aa3.44□□□□□ -1.86
MSH5-219ENST00000497269 CDKN2A-AS1Q9UH64 79 aa3.44□□□□□ -1.86
MSH5-219ENST00000497269 TRAV9-1A0A075B6T8 112 aa3.43□□□□□ -1.86
MSH5-219ENST00000497269 A0A1B0GW15 77 aa3.43□□□□□ -1.86
MSH5-219ENST00000497269 PCP4L1A6NKN8 68 aa3.43□□□□□ -1.86
MSH5-219ENST00000497269 RPL13AP40429 203 aaKnown RBP3.43□□□□□ -1.86
MSH5-219ENST00000497269 MRPL55Q7Z7F7 128 aaKnown RBP3.43□□□□□ -1.86
MSH5-219ENST00000497269 Q8N8P6 123 aa3.43□□□□□ -1.86
MSH5-219ENST00000497269 C2orf88Q9BSF0 95 aa3.43□□□□□ -1.86
MSH5-219ENST00000497269 CYSLTR1Q9Y271 337 aa3.43□□□□□ -1.86
MSH5-219ENST00000497269 IGKV2-28A0A075B6P5 120 aa3.42□□□□□ -1.86
MSH5-219ENST00000497269 TSTD3H0UI37 97 aa3.42□□□□□ -1.86
MSH5-219ENST00000497269 IGKV2D-28P01615 120 aa3.42□□□□□ -1.86
MSH5-219ENST00000497269 PPBPP02775 128 aa3.42□□□□□ -1.86
MSH5-219ENST00000497269 SPINK8P0C7L1 97 aa3.42□□□□□ -1.86
MSH5-219ENST00000497269 CRYGAP11844 174 aa3.42□□□□□ -1.86
MSH5-219ENST00000497269 KRTAP13-2Q52LG2 175 aa3.42□□□□□ -1.86
MSH5-219ENST00000497269 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
MSH5-219ENST00000497269 AMELXQ99217 191 aa3.42□□□□□ -1.86
MSH5-219ENST00000497269 GEMIN7Q9H840 131 aaKnown RBP3.42□□□□□ -1.86
MSH5-219ENST00000497269 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 BCE1O60756 84 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 HIST1H2BKO60814 126 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 HIST1H2BJP06899 126 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 HIST1H2BOP23527 126 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 HIST1H2BBP33778 126 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 PFN2P35080 140 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 RPL28P46779 137 aaKnown RBP3.41□□□□□ -1.86
MSH5-219ENST00000497269 UBE2AP49459 152 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 HIST1H2BDP58876 126 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 HIST1H2BCP62807 126 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 PRLHP81277 87 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 HIST2H2BEQ16778 126 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.41□□□□□ -1.86
MSH5-219ENST00000497269 Q8IZM0 81 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 HIST1H2BHQ93079 126 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 HIST1H2BNQ99877 126 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 HIST1H2BMQ99879 126 aa3.41□□□□□ -1.86
MSH5-219ENST00000497269 LINC00587B1AMM8 73 aa3.4□□□□□ -1.87
MSH5-219ENST00000497269 TMEM238C9JI98 176 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms