RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 TMEM30CPA0ZSE6 113 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 NUPR1O60356 82 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 IGHV3-30P01768 117 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 LINC00032P0C843 101 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 IGHV3-30-5P0DP03 117 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 POLR2JP52435 117 aaKnown RBP0.93□□□□□ -2.26
UBR4-217ENST00000497018 UBE2L3P68036 154 aaKnown RBP0.93□□□□□ -2.26
UBR4-217ENST00000497018 KRTAP6-3Q3LI67 103 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 TDRG1Q3Y452 100 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 C10orf55Q5SWW7 151 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 S100A7L2Q5SY68 101 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 LCE3EQ5T5B0 92 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 NDUFA11Q86Y39 141 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 WFDC9Q8NEX5 89 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 C4orf3Q8WVX3 66 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 C10orf82Q8WW14 230 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 LCN9Q8WX39 176 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 VAMP8Q9BV40 100 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 MRPL35Q9NZE8 188 aaKnown RBP0.93□□□□□ -2.26
UBR4-217ENST00000497018 ORMDL1Q9P0S3 153 aa0.93□□□□□ -2.26
UBR4-217ENST00000497018 HUWE1Q7Z6Z7 4374 aaKnown RBP0.92□□□□□ -2.26
UBR4-217ENST00000497018 DNAH9Q9NYC9 4486 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 TRGV4A0A0C4DH28 118 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 TRBV6-4A0A1B0GX49 114 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 hADV29S1A0JD25 119 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 HCG22E2RYF7 251 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 F8W1H4 67 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 H3BQF6 201 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 M0R2N4 97 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 SIX6O95475 246 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 IGLV3-1P01715 115 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 SMR3BP02814 79 aaPredicted RBP0.92□□□□□ -2.26
UBR4-217ENST00000497018 KRTAP2-3P0C7H8 128 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 IL7P13232 177 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 PDE6GP18545 87 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 SNCAP37840 140 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 ATP5EP56381 51 aaPredicted RBP0.92□□□□□ -2.26
UBR4-217ENST00000497018 CCL8P80075 99 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 C15orf53Q8NAA6 179 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 TSLPQ969D9 159 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 IFI27L1Q96BM0 104 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 LIMD2Q9BT23 127 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 KRTAP2-4Q9BYR9 128 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 CYSTM1Q9H1C7 97 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 ATG5Q9H1Y0 275 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 CDC42SE1Q9NRR8 79 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 MRPL36Q9P0J6 103 aaKnown RBP0.92□□□□□ -2.26
UBR4-217ENST00000497018 DNAH3Q8TD57 4116 aa0.92□□□□□ -2.26
UBR4-217ENST00000497018 FAT2Q9NYQ8 4349 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 TRBV10-1A0A0K0K1A3 114 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 TRBV10-3A0A0K0K1G6 114 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 GNGT2O14610 69 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 HCRTO43612 131 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 KRTAP10-1P60331 282 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 KRTAP13-4Q3LI77 160 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 LCE1EQ5T753 118 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 KRTAP5-3Q6L8H2 238 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 SPTSSBQ8NFR3 76 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 CYP4F30PQ9H0H9 118 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 MED12LQ86YW9 2145 aa0.91□□□□□ -2.26
UBR4-217ENST00000497018 TRAV13-2A0A0B4J235 113 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 TRAV12-3A0A0B4J271 114 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 TRBV7-7A0A0K0K1E9 115 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 LYNX1G3V0Z9 82 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 H3BRM9 83 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 INE1O15225 51 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 MRPS14O60783 128 aaKnown RBP0.9□□□□□ -2.27
UBR4-217ENST00000497018 IGKV4-1P06312 121 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 NMBP08949 121 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 DEFB112Q30KQ8 113 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 DEFB110Q30KQ9 67 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 UNQ5815/PRO19632Q6UWF5 114 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 ZNF818PQ6ZRF7 136 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 COA5Q86WW8 74 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 DMAC1Q96GE9 116 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 AMELYQ99218 206 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 C20orf78Q9BR46 151 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 TXNDC17Q9BRA2 123 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 LINC00846Q9NV44 126 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 AP4S1Q9Y587 144 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 MYCBP2O75592 4640 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 VPS13BQ7Z7G8 4022 aa0.9□□□□□ -2.27
UBR4-217ENST00000497018 LOC110117498A0A087WWA1 95 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 TRBV7-1A0A0A6YYK4 115 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 NBDYA0A0U1RRE5 68 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 A6NIN4 97 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 K7EP34 96 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 UBE2D1P51668 147 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 KRTAP12-2P59991 146 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 KRTAP10-5P60370 271 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 Q5VV11 94 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 LINC00299Q6ZSB3 139 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 FAM213BQ8TBF2 198 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 MYOZ3Q8TDC0 251 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 BET1LQ9NYM9 111 aa0.89□□□□□ -2.27
UBR4-217ENST00000497018 SNRNP200O75643 2136 aaKnown RBP0.89□□□□□ -2.27
UBR4-217ENST00000497018 GPR98Q8WXG9 6306 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 NEBP20929 6669 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 PKHD1L1Q86WI1 4243 aa0.88□□□□□ -2.27
UBR4-217ENST00000497018 PIGBOS1A0A0B4J2F0 54 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms