RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 MRPL35Q9NZE8 188 aaKnown RBP4.33□□□□□ -1.72
SSBP1-213ENST00000496622 RYR2Q92736 4967 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 A0A087WVE0 104 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 A0A087WZ39 114 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 DEFB130BP0DP73 79 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 DEFB130AP0DP74 79 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 DEFB135Q30KP9 77 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 SCGB3A1Q96QR1 104 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 PRO1854Q9UHT4 67 aa4.33□□□□□ -1.72
SSBP1-213ENST00000496622 LOC100131303A0A0U1RQF7 123 aa4.32□□□□□ -1.72
SSBP1-213ENST00000496622 UBE2L6O14933 153 aa4.32□□□□□ -1.72
SSBP1-213ENST00000496622 TSHBP01222 138 aa4.32□□□□□ -1.72
SSBP1-213ENST00000496622 PRB2P02812 416 aaPredicted RBP4.32□□□□□ -1.72
SSBP1-213ENST00000496622 PRSS2P07478 247 aa4.32□□□□□ -1.72
SSBP1-213ENST00000496622 Q6ZVQ6 151 aa4.32□□□□□ -1.72
SSBP1-213ENST00000496622 TRGV2A0A075B6R0 118 aa4.31□□□□□ -1.72
SSBP1-213ENST00000496622 GYPEP15421 78 aa4.31□□□□□ -1.72
SSBP1-213ENST00000496622 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.31□□□□□ -1.72
SSBP1-213ENST00000496622 IGKV2-29A2NJV5 120 aaPredicted RBP4.31□□□□□ -1.72
SSBP1-213ENST00000496622 LINC01546A6NGU7 62 aa4.31□□□□□ -1.72
SSBP1-213ENST00000496622 H7C2G1 150 aa4.31□□□□□ -1.72
SSBP1-213ENST00000496622 LCA10Q71F78 164 aa4.3□□□□□ -1.72
SSBP1-213ENST00000496622 TMEM263Q8WUH6 116 aaKnown RBP4.3□□□□□ -1.72
SSBP1-213ENST00000496622 TOMM6Q96B49 74 aa4.3□□□□□ -1.72
SSBP1-213ENST00000496622 VSIG2Q96IQ7 327 aa4.3□□□□□ -1.72
SSBP1-213ENST00000496622 A0A096LPF7 62 aa4.3□□□□□ -1.72
SSBP1-213ENST00000496622 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
SSBP1-213ENST00000496622 IGIPA6NJ69 53 aa4.3□□□□□ -1.72
SSBP1-213ENST00000496622 IBA57-AS1B1ANH7 110 aa4.3□□□□□ -1.72
SSBP1-213ENST00000496622 IGKV3D-7A0A0C4DH55 119 aa4.29□□□□□ -1.72
SSBP1-213ENST00000496622 F8WEM9 126 aa4.29□□□□□ -1.72
SSBP1-213ENST00000496622 LINC00313P59037 77 aa4.29□□□□□ -1.72
SSBP1-213ENST00000496622 KRTAP10-11P60412 298 aa4.29□□□□□ -1.72
SSBP1-213ENST00000496622 C9orf66Q5T8R8 295 aa4.29□□□□□ -1.72
SSBP1-213ENST00000496622 IGHV3-64A0A075B6Q5 118 aa4.29□□□□□ -1.72
SSBP1-213ENST00000496622 IGHV3-33P01772 117 aa4.29□□□□□ -1.72
SSBP1-213ENST00000496622 IGHV4-30-4P0DP06 118 aa4.29□□□□□ -1.72
SSBP1-213ENST00000496622 FUSP35637 526 aaKnown RBP eCLIP4.29□□□□□ -1.725e-7■□□□□ 8.7
SSBP1-213ENST00000496622 PHF5AQ7RTV0 110 aaKnown RBP4.29□□□□□ -1.72
SSBP1-213ENST00000496622 TRAV8-3A0A0A6YYJ7 113 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 A8MU10 97 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 I3L3M4 83 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 LINC00337Q8N6G1 96 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 FAM104AQ969W3 186 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 STAB2Q8WWQ8 2551 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 KIAA1109Q2LD37 5005 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 TRBV6-5A0A0K0K1A5 114 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 COX7A2LO14548 114 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 PPP1R17O96001 155 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 ATP5EP56381 51 aaPredicted RBP4.28□□□□□ -1.72
SSBP1-213ENST00000496622 Q1RN00 199 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 C20orf203Q8NBC4 194 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 WFDC9Q8NEX5 89 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 LINC00467Q9BRT7 94 aa4.28□□□□□ -1.72
SSBP1-213ENST00000496622 C11orf86A6NJI1 115 aa4.27□□□□□ -1.73
SSBP1-213ENST00000496622 NTM-AS1Q6ZSK4 140 aa4.27□□□□□ -1.73
SSBP1-213ENST00000496622 TIMM21Q9BVV7 248 aa4.27□□□□□ -1.73
SSBP1-213ENST00000496622 TRAV13-2A0A0B4J235 113 aa4.27□□□□□ -1.73
SSBP1-213ENST00000496622 TRGV4A0A0C4DH28 118 aa4.27□□□□□ -1.73
SSBP1-213ENST00000496622 F8VRH5 84 aa4.27□□□□□ -1.73
SSBP1-213ENST00000496622 C16orf74Q96GX8 76 aa4.27□□□□□ -1.73
SSBP1-213ENST00000496622 CELA1Q9UNI1 258 aa4.27□□□□□ -1.73
SSBP1-213ENST00000496622 TENM2Q9NT68 2774 aa4.27□□□□□ -1.73
SSBP1-213ENST00000496622 COL7A1Q02388 2944 aa4.27□□□□□ -1.73
SSBP1-213ENST00000496622 IGLV4-69A0A075B6H9 119 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 A0A0J9YXV3 536 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 A0A0J9YY99 117 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 ZNF815PA8K554 130 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 KLKP1Q107X0 134 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 ESRGQ1W209 222 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 RMI2Q96E14 147 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 CHCHD7Q9BUK0 85 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 KRTAP4-5Q9BYR2 181 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 CMYA5Q8N3K9 4069 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 PRYO14603 147 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 TRIAP1O43715 76 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 HTN3P15516 51 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 UBE2BP63146 152 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 Q6JHZ5 121 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 UBE2D4Q9Y2X8 147 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 SNURFQ9Y675 71 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 CSMD3Q7Z407 3707 aa4.26□□□□□ -1.73
SSBP1-213ENST00000496622 IGLV4-3A0A075B6K6 122 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 IGHV4-28A0A0C4DH34 117 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 IGKV3OR2-268A0A0C4DH90 116 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 K7EQD1 137 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 IGHV3-30P01768 117 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 IGHV3-30-5P0DP03 117 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 CMC4P56277 68 aaPredicted RBP4.25□□□□□ -1.73
SSBP1-213ENST00000496622 NKAPP1Q8N9T2 125 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 TRBV30A0A0K0K1B3 111 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 C7orf65Q6ZTY9 151 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 DIRC1Q969H9 104 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 TMEM223A0PJW6 202 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 MP68P56378 58 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 TSPEAR-AS2P59090 65 aa4.25□□□□□ -1.73
SSBP1-213ENST00000496622 TRAV23DV6A0A075B6W5 121 aa4.24□□□□□ -1.73
SSBP1-213ENST00000496622 PSPHP1O15172 72 aa4.24□□□□□ -1.73
SSBP1-213ENST00000496622 RPL36AP83881 106 aaKnown RBP4.24□□□□□ -1.73
SSBP1-213ENST00000496622 DAND5Q8N907 189 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms