RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 TMEM170BQ5T4T1 132 aa7.6□□□□□ -1.19
FN1-226ENST00000496542 BAGE3Q86Y29 109 aa7.6□□□□□ -1.19
FN1-226ENST00000496542 RPL24P83731 157 aaKnown RBP7.59□□□□□ -1.19
FN1-226ENST00000496542 FAM19A1Q7Z5A9 133 aa7.59□□□□□ -1.19
FN1-226ENST00000496542 COX17Q14061 63 aa7.58□□□□□ -1.2
FN1-226ENST00000496542 FAM229BQ4G0N7 80 aa7.58□□□□□ -1.2
FN1-226ENST00000496542 Q8NDZ9 215 aa7.58□□□□□ -1.2
FN1-226ENST00000496542 TMEM126AQ9H061 195 aa7.58□□□□□ -1.2
FN1-226ENST00000496542 APOC3P02656 99 aa7.57□□□□□ -1.2
FN1-226ENST00000496542 MUC2Q02817 5179 aa7.56□□□□□ -1.2
FN1-226ENST00000496542 M0R378 163 aa7.56□□□□□ -1.2
FN1-226ENST00000496542 LINC00158P58513 81 aa7.56□□□□□ -1.2
FN1-226ENST00000496542 SFTA2Q6UW10 78 aa7.56□□□□□ -1.2
FN1-226ENST00000496542 LINC00304Q8N9R0 145 aa7.56□□□□□ -1.2
FN1-226ENST00000496542 CHTOPQ9Y3Y2 248 aaKnown RBP7.56□□□□□ -1.2
FN1-226ENST00000496542 IGKV2D-26A0A0A0MRZ7 120 aa7.55□□□□□ -1.2
FN1-226ENST00000496542 A0A0U1RRA0 63 aa7.55□□□□□ -1.2
FN1-226ENST00000496542 RETNLBQ9BQ08 111 aa7.55□□□□□ -1.2
FN1-226ENST00000496542 SNAPINO95295 136 aa7.54□□□□□ -1.2
FN1-226ENST00000496542 NDUFA5Q16718 116 aa7.54□□□□□ -1.2
FN1-226ENST00000496542 CBLN2Q8IUK8 224 aa7.53□□□□□ -1.2
FN1-226ENST00000496542 SVBPQ8N300 66 aa7.53□□□□□ -1.2
FN1-226ENST00000496542 IFI27L1Q96BM0 104 aa7.53□□□□□ -1.2
FN1-226ENST00000496542 HIGD2AQ9BW72 106 aa7.53□□□□□ -1.2
FN1-226ENST00000496542 TMEM223A0PJW6 202 aa7.52□□□□□ -1.21
FN1-226ENST00000496542 PLEKHB2Q96CS7 222 aa7.52□□□□□ -1.21
FN1-226ENST00000496542 TRAV12-1A0A0B4J245 112 aa7.51□□□□□ -1.21
FN1-226ENST00000496542 ATP6V1G1O75348 118 aa7.51□□□□□ -1.21
FN1-226ENST00000496542 CHCHD1Q96BP2 118 aaKnown RBP7.51□□□□□ -1.21
FN1-226ENST00000496542 SMIM13P0DJ93 91 aa7.5□□□□□ -1.21
FN1-226ENST00000496542 MEIG1Q5JSS6 88 aa7.5□□□□□ -1.21
FN1-226ENST00000496542 C3orf22Q8N5N4 141 aa7.5□□□□□ -1.21
FN1-226ENST00000496542 BOD1L2Q8IYS8 172 aa7.49□□□□□ -1.21
FN1-226ENST00000496542 YPEL4Q96NS1 127 aa7.49□□□□□ -1.21
FN1-226ENST00000496542 A0A0U1RQV1 116 aa7.48□□□□□ -1.21
FN1-226ENST00000496542 NCR3O14931 201 aa7.48□□□□□ -1.21
FN1-226ENST00000496542 H0Y8G0 127 aa7.47□□□□□ -1.21
FN1-226ENST00000496542 PRYO14603 147 aa7.47□□□□□ -1.21
FN1-226ENST00000496542 HSBP1O75506 76 aa7.47□□□□□ -1.21
FN1-226ENST00000496542 FAM19A2Q8N3H0 131 aa7.47□□□□□ -1.21
FN1-226ENST00000496542 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
FN1-226ENST00000496542 SPRR4Q96PI1 79 aa7.47□□□□□ -1.21
FN1-226ENST00000496542 IGLV7-46A0A075B6I9 117 aa7.46□□□□□ -1.22
FN1-226ENST00000496542 HERV-K104P63124 156 aa7.46□□□□□ -1.22
FN1-226ENST00000496542 NDUFA12Q9UI09 145 aa7.46□□□□□ -1.22
FN1-226ENST00000496542 ZNF706Q9Y5V0 76 aaPredicted RBP7.46□□□□□ -1.22
FN1-226ENST00000496542 CDIP1Q9H305 208 aa7.45□□□□□ -1.22
FN1-226ENST00000496542 MYMXA0A1B0GTQ4 84 aa7.44□□□□□ -1.22
FN1-226ENST00000496542 ETDCA0A1B0GVM5 59 aa7.44□□□□□ -1.22
FN1-226ENST00000496542 TPRXLQ17RH7 258 aa7.44□□□□□ -1.22
FN1-226ENST00000496542 TRBV10-3A0A0K0K1G6 114 aa7.43□□□□□ -1.22
FN1-226ENST00000496542 LINC00587B1AMM8 73 aa7.43□□□□□ -1.22
FN1-226ENST00000496542 CTAG1AP78358 180 aa7.43□□□□□ -1.22
FN1-226ENST00000496542 LINC00337Q8N6G1 96 aa7.43□□□□□ -1.22
FN1-226ENST00000496542 MAP1LC3CQ9BXW4 147 aa7.43□□□□□ -1.22
FN1-226ENST00000496542 KCNQ1DNQ9H478 68 aa7.43□□□□□ -1.22
FN1-226ENST00000496542 GHRHP01286 108 aa7.42□□□□□ -1.22
FN1-226ENST00000496542 SPRR1AP35321 89 aa7.42□□□□□ -1.22
FN1-226ENST00000496542 TSPEAR-AS2P59090 65 aa7.42□□□□□ -1.22
FN1-226ENST00000496542 SPAG11AQ6PDA7 123 aa7.42□□□□□ -1.22
FN1-226ENST00000496542 SMCR5Q8TEV8 140 aa7.42□□□□□ -1.22
FN1-226ENST00000496542 PPDPFQ9H3Y8 114 aa7.42□□□□□ -1.22
FN1-226ENST00000496542 MUC17Q685J3 4493 aa7.41□□□□□ -1.22
FN1-226ENST00000496542 LEPROTL1O95214 131 aa7.41□□□□□ -1.22
FN1-226ENST00000496542 TRGC2P03986 189 aa7.41□□□□□ -1.22
FN1-226ENST00000496542 DAND5Q8N907 189 aa7.41□□□□□ -1.22
FN1-226ENST00000496542 Q8NBF4 154 aa7.41□□□□□ -1.22
FN1-226ENST00000496542 FAT4Q6V0I7 4981 aa7.41□□□□□ -1.22
FN1-226ENST00000496542 KRTAP4-16G5E9R7 235 aaPredicted RBP7.4□□□□□ -1.22
FN1-226ENST00000496542 LEPROTO15243 131 aa7.4□□□□□ -1.22
FN1-226ENST00000496542 SERF1AO75920 110 aa7.4□□□□□ -1.22
FN1-226ENST00000496542 S100A12P80511 92 aa7.4□□□□□ -1.22
FN1-226ENST00000496542 PLNP26678 52 aa7.39□□□□□ -1.23
FN1-226ENST00000496542 LINC00310P59036 64 aa7.39□□□□□ -1.23
FN1-226ENST00000496542 DDTP30046 118 aa7.38□□□□□ -1.23
FN1-226ENST00000496542 HERVK_113P61574 105 aa7.38□□□□□ -1.23
FN1-226ENST00000496542 GAGE2AQ6NT46 116 aa7.38□□□□□ -1.23
FN1-226ENST00000496542 PMCHL2Q9BQD1 86 aa7.38□□□□□ -1.23
FN1-226ENST00000496542 B5MCH6 92 aa7.37□□□□□ -1.23
FN1-226ENST00000496542 J3QQQ9 107 aa7.37□□□□□ -1.23
FN1-226ENST00000496542 DPM2O94777 84 aa7.37□□□□□ -1.23
FN1-226ENST00000496542 FABP4P15090 132 aa7.37□□□□□ -1.23
FN1-226ENST00000496542 HSPB8Q9UJY1 196 aa7.37□□□□□ -1.23
FN1-226ENST00000496542 TRBV10-2A0A0K0K1G8 114 aa7.36□□□□□ -1.23
FN1-226ENST00000496542 LGALS3P17931 250 aaKnown RBP7.36□□□□□ -1.23
FN1-226ENST00000496542 LINC00483Q53H64 154 aa7.36□□□□□ -1.23
FN1-226ENST00000496542 FP248Q71RG6 208 aaPredicted RBP7.36□□□□□ -1.23
FN1-226ENST00000496542 MIEN1Q9BRT3 115 aa7.36□□□□□ -1.23
FN1-226ENST00000496542 IGLV9-49A0A0B4J1Y8 123 aa7.35□□□□□ -1.23
FN1-226ENST00000496542 LOC107984156A0A0G2JMH3 177 aa7.35□□□□□ -1.23
FN1-226ENST00000496542 ERC2-IT1O76042 136 aa7.35□□□□□ -1.23
FN1-226ENST00000496542 NMUP48645 174 aa7.35□□□□□ -1.23
FN1-226ENST00000496542 MOBPQ13875 183 aa7.35□□□□□ -1.23
FN1-226ENST00000496542 ARL17AQ8IVW1 177 aa7.35□□□□□ -1.23
FN1-226ENST00000496542 SPANXB1Q9NS25 103 aaPredicted RBP7.35□□□□□ -1.23
FN1-226ENST00000496542 IGKCP01834 107 aa7.34□□□□□ -1.23
FN1-226ENST00000496542 S100A7L2Q5SY68 101 aa7.34□□□□□ -1.23
FN1-226ENST00000496542 SPINK1P00995 79 aa7.33□□□□□ -1.24
FN1-226ENST00000496542 NPC2P61916 151 aa7.33□□□□□ -1.24
FN1-226ENST00000496542 Q6ZRX8 168 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms