RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 IFITM1P13164 125 aa7.22□□□□□ -1.25
RNF220-217ENST00000496262 C2orf82Q6UX34 121 aa7.22□□□□□ -1.25
RNF220-217ENST00000496262 DNAJC30Q96LL9 226 aa7.22□□□□□ -1.25
RNF220-217ENST00000496262 CHCHD7Q9BUK0 85 aa7.22□□□□□ -1.25
RNF220-217ENST00000496262 PRSS2P07478 247 aa7.21□□□□□ -1.26
RNF220-217ENST00000496262 LINC00694P0DN24 101 aa7.21□□□□□ -1.26
RNF220-217ENST00000496262 GAGE2BQ13066 116 aa7.21□□□□□ -1.26
RNF220-217ENST00000496262 GAGE2EQ4V326 116 aa7.21□□□□□ -1.26
RNF220-217ENST00000496262 Q6Q795 121 aa7.21□□□□□ -1.26
RNF220-217ENST00000496262 FAM104AQ969W3 186 aa7.21□□□□□ -1.26
RNF220-217ENST00000496262 GAGE2DQ9UEU5 116 aa7.21□□□□□ -1.26
RNF220-217ENST00000496262 UBE2D4Q9Y2X8 147 aa7.21□□□□□ -1.26
RNF220-217ENST00000496262 FLG2Q5D862 2391 aaPredicted RBP7.21□□□□□ -1.26
RNF220-217ENST00000496262 J3QL48 77 aa7.2□□□□□ -1.26
RNF220-217ENST00000496262 NDUFA1O15239 70 aa7.2□□□□□ -1.26
RNF220-217ENST00000496262 RNASE13Q5GAN3 156 aaKnown RBP7.2□□□□□ -1.26
RNF220-217ENST00000496262 DNAH8Q96JB1 4490 aa7.2□□□□□ -1.26
RNF220-217ENST00000496262 IGKV2D-24A0A075B6R9 120 aa7.19□□□□□ -1.26
RNF220-217ENST00000496262 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.19□□□□□ -1.26
RNF220-217ENST00000496262 IGKV2-29A2NJV5 120 aaPredicted RBP7.19□□□□□ -1.26
RNF220-217ENST00000496262 LST1O00453 97 aa7.19□□□□□ -1.26
RNF220-217ENST00000496262 ADAMTSL4-AS1Q5T5F5 129 aa7.19□□□□□ -1.26
RNF220-217ENST00000496262 LINC00528Q8N1L1 170 aa7.19□□□□□ -1.26
RNF220-217ENST00000496262 IGLV5-45A0A087WSX0 123 aa7.18□□□□□ -1.26
RNF220-217ENST00000496262 TEX49A0A1B0GTD5 131 aa7.18□□□□□ -1.26
RNF220-217ENST00000496262 FAM240AA0A1B0GVK7 77 aa7.18□□□□□ -1.26
RNF220-217ENST00000496262 H7C423 109 aa7.18□□□□□ -1.26
RNF220-217ENST00000496262 NDUFV3P56181 108 aaKnown RBP7.18□□□□□ -1.26
RNF220-217ENST00000496262 GAGE6Q13070 117 aa7.18□□□□□ -1.26
RNF220-217ENST00000496262 LCE2AQ5TA79 106 aaPredicted RBP7.18□□□□□ -1.26
RNF220-217ENST00000496262 COPS9Q8WXC6 57 aa7.18□□□□□ -1.26
RNF220-217ENST00000496262 KLK12Q9UKR0 248 aa7.18□□□□□ -1.26
RNF220-217ENST00000496262 PLA2G1BP04054 148 aaKnown RBP7.17□□□□□ -1.26
RNF220-217ENST00000496262 NPC2P61916 151 aa7.17□□□□□ -1.26
RNF220-217ENST00000496262 CIRBPQ14011 172 aaKnown RBP7.17□□□□□ -1.26
RNF220-217ENST00000496262 CLEC2BQ92478 149 aa7.17□□□□□ -1.26
RNF220-217ENST00000496262 RMI2Q96E14 147 aa7.17□□□□□ -1.26
RNF220-217ENST00000496262 SVIPQ8NHG7 77 aa7.16□□□□□ -1.26
RNF220-217ENST00000496262 HERVK_113P63121 156 aa7.15□□□□□ -1.26
RNF220-217ENST00000496262 DGAT2L7PQ6IED9 249 aa7.15□□□□□ -1.26
RNF220-217ENST00000496262 Q6ZSA8 131 aa7.15□□□□□ -1.26
RNF220-217ENST00000496262 SCXQ7RTU7 201 aa7.15□□□□□ -1.26
RNF220-217ENST00000496262 TMEM101Q96IK0 257 aa7.15□□□□□ -1.26
RNF220-217ENST00000496262 CDKN2A-AS1Q9UH64 79 aa7.15□□□□□ -1.26
RNF220-217ENST00000496262 IGLV5-39A0A0G2JS06 123 aa7.14□□□□□ -1.27
RNF220-217ENST00000496262 RPL36AP83881 106 aaKnown RBP7.14□□□□□ -1.27
RNF220-217ENST00000496262 RPL36ALQ969Q0 106 aaKnown RBP7.14□□□□□ -1.27
RNF220-217ENST00000496262 FAM19A3Q7Z5A8 133 aa7.13□□□□□ -1.27
RNF220-217ENST00000496262 LINC00308Q8TCZ7 52 aa7.13□□□□□ -1.27
RNF220-217ENST00000496262 SS18L2Q9UHA2 77 aa7.13□□□□□ -1.27
RNF220-217ENST00000496262 TRBV10-1A0A0K0K1A3 114 aa7.12□□□□□ -1.27
RNF220-217ENST00000496262 COX7A2LO14548 114 aa7.12□□□□□ -1.27
RNF220-217ENST00000496262 CRPP02741 224 aa7.12□□□□□ -1.27
RNF220-217ENST00000496262 DAND5Q8N907 189 aa7.12□□□□□ -1.27
RNF220-217ENST00000496262 C1orf43Q9BWL3 253 aa7.12□□□□□ -1.27
RNF220-217ENST00000496262 TRBV7-7A0A0K0K1E9 115 aa7.11□□□□□ -1.27
RNF220-217ENST00000496262 B5MCH6 92 aa7.11□□□□□ -1.27
RNF220-217ENST00000496262 ACYP1P07311 99 aa7.11□□□□□ -1.27
RNF220-217ENST00000496262 HERV-K104P63124 156 aa7.11□□□□□ -1.27
RNF220-217ENST00000496262 CHCHD5Q9BSY4 110 aa7.11□□□□□ -1.27
RNF220-217ENST00000496262 PPDPFQ9H3Y8 114 aa7.11□□□□□ -1.27
RNF220-217ENST00000496262 TRBV6-8A0A0A6YYG3 113 aa7.1□□□□□ -1.27
RNF220-217ENST00000496262 SMIM1B2RUZ4 78 aa7.1□□□□□ -1.27
RNF220-217ENST00000496262 CCDC179H3BU77 68 aa7.1□□□□□ -1.27
RNF220-217ENST00000496262 TRACP01848 142 aa7.1□□□□□ -1.27
RNF220-217ENST00000496262 ANGP03950 147 aaKnown RBP7.1□□□□□ -1.27
RNF220-217ENST00000496262 COX6A2Q02221 97 aa7.1□□□□□ -1.27
RNF220-217ENST00000496262 MEIG1Q5JSS6 88 aa7.1□□□□□ -1.27
RNF220-217ENST00000496262 LINC00242Q5T6M2 205 aa7.1□□□□□ -1.27
RNF220-217ENST00000496262 CLPSL2Q6UWE3 100 aa7.1□□□□□ -1.27
RNF220-217ENST00000496262 ENHOQ6UWT2 76 aa7.1□□□□□ -1.27
RNF220-217ENST00000496262 CIRBP-AS1Q8TBR5 109 aa7.1□□□□□ -1.27
RNF220-217ENST00000496262 CSDC2Q9Y534 153 aaKnown RBP7.09□□□□□ -1.27
RNF220-217ENST00000496262 KRTAP29-1A8MX34 341 aaPredicted RBP7.08□□□□□ -1.28
RNF220-217ENST00000496262 USP17L23D6RBM5 183 aa7.08□□□□□ -1.28
RNF220-217ENST00000496262 C14orf177Q52M58 125 aa7.08□□□□□ -1.28
RNF220-217ENST00000496262 ZNF625Q96I27 306 aaPredicted RBP7.08□□□□□ -1.28
RNF220-217ENST00000496262 SOSTDC1Q6X4U4 206 aa7.07□□□□□ -1.28
RNF220-217ENST00000496262 TRAV13-1A0A0B4J241 112 aa7.06□□□□□ -1.28
RNF220-217ENST00000496262 A0A0U1RRA0 63 aa7.06□□□□□ -1.28
RNF220-217ENST00000496262 UBE2L6O14933 153 aa7.06□□□□□ -1.28
RNF220-217ENST00000496262 KRTAP10-4P60372 401 aaPredicted RBP7.06□□□□□ -1.28
RNF220-217ENST00000496262 TMEM243Q9BU79 118 aa7.06□□□□□ -1.28
RNF220-217ENST00000496262 LRP1Q07954 4544 aaKnown RBP7.06□□□□□ -1.28
RNF220-217ENST00000496262 TRAV13-2A0A0B4J235 113 aa7.05□□□□□ -1.28
RNF220-217ENST00000496262 NTM-AS1Q6ZSK4 140 aa7.05□□□□□ -1.28
RNF220-217ENST00000496262 LINC00643Q86TS7 51 aa7.05□□□□□ -1.28
RNF220-217ENST00000496262 LINC00269Q8N2A0 174 aa7.05□□□□□ -1.28
RNF220-217ENST00000496262 IMUPQ9GZP8 106 aa7.05□□□□□ -1.28
RNF220-217ENST00000496262 HMCN2Q8NDA2 5059 aa7.04□□□□□ -1.28
RNF220-217ENST00000496262 IGLV10-54A0A075B6I4 117 aa7.04□□□□□ -1.28
RNF220-217ENST00000496262 BAALC-AS2P0C853 105 aa7.04□□□□□ -1.28
RNF220-217ENST00000496262 RPL37AP61513 92 aaKnown RBP7.04□□□□□ -1.28
RNF220-217ENST00000496262 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
RNF220-217ENST00000496262 CDC42SE2Q9NRR3 84 aa7.04□□□□□ -1.28
RNF220-217ENST00000496262 COX7B2Q8TF08 81 aa7.03□□□□□ -1.28
RNF220-217ENST00000496262 FAT3Q8TDW7 4589 aa7.03□□□□□ -1.28
RNF220-217ENST00000496262 FAM236AA0A1B0GUQ0 79 aa7.02□□□□□ -1.29
RNF220-217ENST00000496262 FAM236BA0A1B0GV22 79 aa7.02□□□□□ -1.29
RNF220-217ENST00000496262 RPL28P46779 137 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms