RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 LY6HO94772 140 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 FSHBP01225 129 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 IGKV4-1P06312 121 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 VPREB1P12018 145 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 UBE2AP49459 152 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 DGAT2L7PQ6IED9 249 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 NTM-AS1Q6ZSK4 140 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 MUC7Q8TAX7 377 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 USMG5Q96IX5 58 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 KRTAP4-5Q9BYR2 181 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 RBM12B-AS1Q9P1G2 102 aa1.89□□□□□ -2.11
MDC1-208ENST00000494654 MTORP42345 2549 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 SPG11Q96JI7 2443 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 CCDC168Q8NDH2 2452 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 A0A096LNT2 108 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 G3V318 75 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 BPY2O14599 106 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 GYPEP15421 78 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 APOC4P55056 127 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 LINC00158P58513 81 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 NANOS2P60321 138 aaKnown RBP1.88□□□□□ -2.11
MDC1-208ENST00000494654 HAMPP81172 84 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 SPINK13Q1W4C9 94 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 STHQ8IWL8 128 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 FDCSPQ8NFU4 85 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 ZCCHC13Q8WW36 166 aaKnown RBP1.88□□□□□ -2.11
MDC1-208ENST00000494654 RHPN1-AS1Q9BWJ2 59 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 CDC42SE2Q9NRR3 84 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 Q9UF83 564 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 LINC00588Q9Y4M8 146 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 ZNF469Q96JG9 3925 aaPredicted RBP1.88□□□□□ -2.11
MDC1-208ENST00000494654 NIPBLQ6KC79 2804 aaeCLIP1.88□□□□□ -2.11
MDC1-208ENST00000494654 PKDREJQ9NTG1 2253 aa1.88□□□□□ -2.11
MDC1-208ENST00000494654 RP1L1Q8IWN7 2480 aaPredicted RBP1.88□□□□□ -2.11
MDC1-208ENST00000494654 HIVEP3Q5T1R4 2406 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 PRRC2CQ9Y520 2896 aaKnown RBP1.87□□□□□ -2.11
MDC1-208ENST00000494654 TRAV22A0A0B4J277 110 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 C19orf84I3L1E1 186 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 M0R2N4 97 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 UBE2L6O14933 153 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 ZNF73O43830 326 aaPredicted RBP1.87□□□□□ -2.11
MDC1-208ENST00000494654 COX7BP24311 80 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 PROK1P58294 105 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 Q5VV11 94 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 LINC00575Q6W349 94 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 Q6ZTI0 123 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 C7orf65Q6ZTY9 151 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 Q8IZM0 81 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 Q9BRP9 147 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 ESM1Q9NQ30 184 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 ANKHD1Q8IWZ3 2542 aaKnown RBP1.87□□□□□ -2.11
MDC1-208ENST00000494654 WNK2Q9Y3S1 2297 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 ALMS1Q8TCU4 4167 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 TACC2O95359 2948 aa1.87□□□□□ -2.11
MDC1-208ENST00000494654 VPS13CQ709C8 3753 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 DCHS2Q6V1P9 2916 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 IGKV3-7A0A075B6H7 116 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 IGHV4-30-2A0A087WSY4 118 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 IGHV3-73A0A0B4J1V6 119 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 IGHV3OR16-9A0A0B4J2B5 98 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 LOC100131303A0A0U1RQF7 123 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 A6NN06 94 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 M0R378 163 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 PSCAO43653 123 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 INSP01308 110 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 ELOF1P60002 83 aaKnown RBP1.86□□□□□ -2.11
MDC1-208ENST00000494654 SYCNQ0VAF6 134 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 COX17Q14061 63 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 C11orf71Q6IPW1 123 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 CD164L2Q6UWJ8 174 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 IGFL3Q6UXB1 125 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.86□□□□□ -2.11
MDC1-208ENST00000494654 Q75L30 129 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 PHF5AQ7RTV0 110 aaKnown RBP1.86□□□□□ -2.11
MDC1-208ENST00000494654 C1orf64Q8NEQ6 169 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 UBE2E2Q96LR5 201 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 HIGD2AQ9BW72 106 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 TOMM7Q9P0U1 55 aa1.86□□□□□ -2.11
MDC1-208ENST00000494654 MAP1AP78559 2803 aaPredicted RBP1.85□□□□□ -2.11
MDC1-208ENST00000494654 NBEAL1Q6ZS30 2694 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 ACANP16112 2415 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 TRBV6-8A0A0A6YYG3 113 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 A0A1B0GW54 56 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 LYNX1G3V0Z9 82 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 NDUFB1O75438 58 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 IGHV4-30-4P0DP06 118 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 LYNX1P0DP58 116 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 ADORA2A-AS1P86434 159 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 KRTAP21-3Q3LHN1 58 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 C6orf99Q4VX62 202 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 ATP11AUNQ6ZP68 121 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 Q6ZQY7 126 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 LCA10Q71F78 164 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 SCXQ7RTU7 201 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 SMIM29Q86T20 159 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 LINC00269Q8N2A0 174 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 SPATA3Q8NHX4 192 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 LIMD2Q9BT23 127 aa1.85□□□□□ -2.11
MDC1-208ENST00000494654 IGLV4-60A0A075B6I1 120 aa1.84□□□□□ -2.11
MDC1-208ENST00000494654 IGHV4-28A0A0C4DH34 117 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms