RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 C6orf48Q9UBA6 75 aa3.03□□□□□ -1.92
PTCD3-219ENST00000494323 IGHV3OR16-9A0A0B4J2B5 98 aa3.02□□□□□ -1.93
PTCD3-219ENST00000494323 M0QXV9 152 aa3.02□□□□□ -1.93
PTCD3-219ENST00000494323 S100PP25815 95 aa3.02□□□□□ -1.93
PTCD3-219ENST00000494323 KIAA0087Q14695 138 aa3.02□□□□□ -1.93
PTCD3-219ENST00000494323 C2orf82Q6UX34 121 aa3.02□□□□□ -1.93
PTCD3-219ENST00000494323 FAM231DQ6ZW35 169 aa3.02□□□□□ -1.93
PTCD3-219ENST00000494323 OR10D4PQ8NGN7 298 aa3.02□□□□□ -1.93
PTCD3-219ENST00000494323 TRAV9-1A0A075B6T8 112 aa3.01□□□□□ -1.93
PTCD3-219ENST00000494323 C9JQL5 133 aa3.01□□□□□ -1.93
PTCD3-219ENST00000494323 ZNF861PO60384 105 aa3.01□□□□□ -1.93
PTCD3-219ENST00000494323 TLX1NBP0CAT3 122 aa3.01□□□□□ -1.93
PTCD3-219ENST00000494323 SMAGPQ0VAQ4 97 aa3.01□□□□□ -1.93
PTCD3-219ENST00000494323 ADIRFQ15847 76 aa3.01□□□□□ -1.93
PTCD3-219ENST00000494323 COX19Q49B96 90 aa3.01□□□□□ -1.93
PTCD3-219ENST00000494323 MRPL51Q4U2R6 128 aaKnown RBP3.01□□□□□ -1.93
PTCD3-219ENST00000494323 ANAPC11Q9NYG5 84 aa3.01□□□□□ -1.93
PTCD3-219ENST00000494323 TCAPO15273 167 aa3□□□□□ -1.93
PTCD3-219ENST00000494323 PPP1R17O96001 155 aa3□□□□□ -1.93
PTCD3-219ENST00000494323 CKS2P33552 79 aa3□□□□□ -1.93
PTCD3-219ENST00000494323 RPL23P62829 140 aaKnown RBP3□□□□□ -1.93
PTCD3-219ENST00000494323 LINC01551Q86U37 167 aa3□□□□□ -1.93
PTCD3-219ENST00000494323 LINC00469Q8N7U9 141 aa3□□□□□ -1.93
PTCD3-219ENST00000494323 RETNLBQ9BQ08 111 aa3□□□□□ -1.93
PTCD3-219ENST00000494323 TIMM21Q9BVV7 248 aa3□□□□□ -1.93
PTCD3-219ENST00000494323 TRBV24-1A0A075B6N3 115 aa2.99□□□□□ -1.93
PTCD3-219ENST00000494323 TGIF2-C20orf24A0A0A6YYL0 155 aa2.99□□□□□ -1.93
PTCD3-219ENST00000494323 SCO1O75880 301 aa2.99□□□□□ -1.93
PTCD3-219ENST00000494323 RAB5BP61020 215 aa2.99□□□□□ -1.93
PTCD3-219ENST00000494323 HBBP68871 147 aa2.99□□□□□ -1.93
PTCD3-219ENST00000494323 FAM104BQ5XKR9 115 aa2.99□□□□□ -1.93
PTCD3-219ENST00000494323 CBLN2Q8IUK8 224 aa2.99□□□□□ -1.93
PTCD3-219ENST00000494323 PACRGQ96M98 296 aaPredicted RBP2.99□□□□□ -1.93
PTCD3-219ENST00000494323 XAGE1AQ9HD64 81 aa2.99□□□□□ -1.93
PTCD3-219ENST00000494323 OSTCQ9NRP0 149 aa2.99□□□□□ -1.93
PTCD3-219ENST00000494323 C22orf24Q9Y442 160 aa2.99□□□□□ -1.93
PTCD3-219ENST00000494323 V9GYV3 84 aa2.99□□□□□ -1.93
PTCD3-219ENST00000494323 TRBV30A0A0K0K1B3 111 aa2.98□□□□□ -1.93
PTCD3-219ENST00000494323 D6R8Y8 96 aa2.98□□□□□ -1.93
PTCD3-219ENST00000494323 NDUFC2-KCTD14E9PQ53 114 aa2.98□□□□□ -1.93
PTCD3-219ENST00000494323 NPYP01303 97 aa2.98□□□□□ -1.93
PTCD3-219ENST00000494323 CRYGAP11844 174 aa2.98□□□□□ -1.93
PTCD3-219ENST00000494323 RAB5AP20339 215 aa2.98□□□□□ -1.93
PTCD3-219ENST00000494323 MRPS36P82909 103 aaKnown RBP2.98□□□□□ -1.93
PTCD3-219ENST00000494323 C20orf78Q9BR46 151 aa2.98□□□□□ -1.93
PTCD3-219ENST00000494323 SPANXA1Q9NS26 97 aa2.98□□□□□ -1.93
PTCD3-219ENST00000494323 TOMM7Q9P0U1 55 aa2.98□□□□□ -1.93
PTCD3-219ENST00000494323 NAT8BQ9UHF3 227 aa2.98□□□□□ -1.93
PTCD3-219ENST00000494323 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
PTCD3-219ENST00000494323 COLCA2A8K830 154 aa2.97□□□□□ -1.93
PTCD3-219ENST00000494323 S100A8P05109 93 aa2.97□□□□□ -1.93
PTCD3-219ENST00000494323 S100A6P06703 90 aa2.97□□□□□ -1.93
PTCD3-219ENST00000494323 CKS1BP61024 79 aa2.97□□□□□ -1.93
PTCD3-219ENST00000494323 ATP5L2Q7Z4Y8 100 aa2.97□□□□□ -1.93
PTCD3-219ENST00000494323 SMIM2Q9BVW6 85 aa2.97□□□□□ -1.93
PTCD3-219ENST00000494323 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
PTCD3-219ENST00000494323 CHTOPQ9Y3Y2 248 aaKnown RBP2.97□□□□□ -1.93
PTCD3-219ENST00000494323 LOC389332A0A1B0GUA5 103 aa2.96□□□□□ -1.94
PTCD3-219ENST00000494323 A0A1B0GW15 77 aa2.96□□□□□ -1.94
PTCD3-219ENST00000494323 SMIM27A0A1W2PRY6 76 aa2.96□□□□□ -1.94
PTCD3-219ENST00000494323 NUPR1O60356 82 aa2.96□□□□□ -1.94
PTCD3-219ENST00000494323 IFI27P40305 119 aaPredicted RBP2.96□□□□□ -1.94
PTCD3-219ENST00000494323 RPL28P46779 137 aaKnown RBP2.96□□□□□ -1.94
PTCD3-219ENST00000494323 KRTAP13-2Q52LG2 175 aa2.96□□□□□ -1.94
PTCD3-219ENST00000494323 MRPL54Q6P161 138 aaKnown RBP2.96□□□□□ -1.94
PTCD3-219ENST00000494323 LINC00167Q96N53 147 aa2.96□□□□□ -1.94
PTCD3-219ENST00000494323 YPEL4Q96NS1 127 aa2.96□□□□□ -1.94
PTCD3-219ENST00000494323 BCE1O60756 84 aa2.95□□□□□ -1.94
PTCD3-219ENST00000494323 TEX43Q6ZNM6 134 aa2.95□□□□□ -1.94
PTCD3-219ENST00000494323 TMEM136Q6ZRR5 245 aa2.95□□□□□ -1.94
PTCD3-219ENST00000494323 MRPL55Q7Z7F7 128 aaKnown RBP2.95□□□□□ -1.94
PTCD3-219ENST00000494323 TMEM141Q96I45 108 aa2.95□□□□□ -1.94
PTCD3-219ENST00000494323 GNB1LQ9BYB4 327 aa2.95□□□□□ -1.94
PTCD3-219ENST00000494323 LINC00173Q6ZV60 143 aa2.94□□□□□ -1.94
PTCD3-219ENST00000494323 LINC00304Q8N9R0 145 aa2.94□□□□□ -1.94
PTCD3-219ENST00000494323 PRELID3AQ96N28 172 aa2.94□□□□□ -1.94
PTCD3-219ENST00000494323 CDKN2A-AS1Q9UH64 79 aa2.94□□□□□ -1.94
PTCD3-219ENST00000494323 TRAPPC1Q9Y5R8 145 aa2.94□□□□□ -1.94
PTCD3-219ENST00000494323 IGKV2D-26A0A0A0MRZ7 120 aa2.93□□□□□ -1.94
PTCD3-219ENST00000494323 A0A1B0GXF2 115 aa2.93□□□□□ -1.94
PTCD3-219ENST00000494323 PPBPP02775 128 aa2.93□□□□□ -1.94
PTCD3-219ENST00000494323 UBE2AP49459 152 aa2.93□□□□□ -1.94
PTCD3-219ENST00000494323 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
PTCD3-219ENST00000494323 Q8IZM0 81 aa2.93□□□□□ -1.94
PTCD3-219ENST00000494323 ORMDL3Q8N138 153 aa2.93□□□□□ -1.94
PTCD3-219ENST00000494323 AMELXQ99217 191 aa2.93□□□□□ -1.94
PTCD3-219ENST00000494323 C2orf88Q9BSF0 95 aa2.93□□□□□ -1.94
PTCD3-219ENST00000494323 TP73-AS1Q9UF72 201 aa2.93□□□□□ -1.94
PTCD3-219ENST00000494323 IGKV2-28A0A075B6P5 120 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 IGIPA6NJ69 53 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 F8VRH5 84 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 HIST1H2BKO60814 126 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 IGKV2D-28P01615 120 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 TRGC2P03986 189 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 HIST1H2BJP06899 126 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 HIST1H2BOP23527 126 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 S100A2P29034 98 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 HIST1H2BBP33778 126 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 HIST1H2BDP58876 126 aa2.92□□□□□ -1.94
PTCD3-219ENST00000494323 HIST1H2BCP62807 126 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms