RNA–Protein interactions for RNA: ENST00000494044.1

LPP-218, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5

Gene LPP, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-218ENST00000494044 CSPG4Q6UVK1 2322 aa0.09□□□□□ -2.39
LPP-218ENST00000494044 KMT2AQ03164 3969 aa0.09□□□□□ -2.39
LPP-218ENST00000494044 MYCBP2O75592 4640 aa0.09□□□□□ -2.39
LPP-218ENST00000494044 PRM1P04553 51 aa0.09□□□□□ -2.4
LPP-218ENST00000494044 NMSQ5H8A3 153 aa0.09□□□□□ -2.4
LPP-218ENST00000494044 SMARCA2P51531 1590 aa0.09□□□□□ -2.4
LPP-218ENST00000494044 MON2Q7Z3U7 1717 aa0.09□□□□□ -2.4
LPP-218ENST00000494044 NEXMIFQ5QGS0 1516 aa0.08□□□□□ -2.4
LPP-218ENST00000494044 LPAP08519 4548 aa0.08□□□□□ -2.4
LPP-218ENST00000494044 LRRC37AA6NMS7 1700 aa0.08□□□□□ -2.4
LPP-218ENST00000494044 SPINK4O60575 86 aa0.08□□□□□ -2.4
LPP-218ENST00000494044 PEA15Q15121 130 aa0.08□□□□□ -2.4
LPP-218ENST00000494044 DEFB105AQ8NG35 78 aa0.08□□□□□ -2.4
LPP-218ENST00000494044 ABCC3O15438 1527 aa0.08□□□□□ -2.4
LPP-218ENST00000494044 CPSF4LA6NMK7 179 aaKnown RBP0.07□□□□□ -2.4
LPP-218ENST00000494044 S100A16Q96FQ6 103 aaKnown RBP0.07□□□□□ -2.4
LPP-218ENST00000494044 TSC2P49815 1807 aa0.07□□□□□ -2.4
LPP-218ENST00000494044 CHD8Q9HCK8 2581 aa0.06□□□□□ -2.4
LPP-218ENST00000494044 C5P01031 1676 aa0.06□□□□□ -2.4
LPP-218ENST00000494044 BSNQ9UPA5 3926 aa0.05□□□□□ -2.4
LPP-218ENST00000494044 I3L3M4 83 aa0.05□□□□□ -2.4
LPP-218ENST00000494044 SPRR2DP22532 72 aa0.05□□□□□ -2.4
LPP-218ENST00000494044 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
LPP-218ENST00000494044 RABAC1Q9UI14 185 aa0.05□□□□□ -2.4
LPP-218ENST00000494044 MYO3AQ8NEV4 1616 aa0.05□□□□□ -2.4
LPP-218ENST00000494044 MYH4Q9Y623 1939 aa0.05□□□□□ -2.4
LPP-218ENST00000494044 KIAA1551Q9HCM1 1747 aa0.04□□□□□ -2.4
LPP-218ENST00000494044 IQCF6A8MYZ5 107 aa0.04□□□□□ -2.4
LPP-218ENST00000494044 KLK9Q2XQG4 91 aa0.04□□□□□ -2.4
LPP-218ENST00000494044 FMN2Q9NZ56 1722 aa0.04□□□□□ -2.4
LPP-218ENST00000494044 CRYBG1Q9Y4K1 1723 aa0.04□□□□□ -2.4
LPP-218ENST00000494044 CYB5AP00167 134 aa0.03□□□□□ -2.4
LPP-218ENST00000494044 SNRPFP62306 86 aaKnown RBP0.03□□□□□ -2.4
LPP-218ENST00000494044 PLGLAQ15195 96 aa0.03□□□□□ -2.4
LPP-218ENST00000494044 TDRG1Q3Y452 100 aa0.03□□□□□ -2.4
LPP-218ENST00000494044 APLNQ9ULZ1 77 aa0.03□□□□□ -2.4
LPP-218ENST00000494044 FLNCQ14315 2725 aa0.03□□□□□ -2.4
LPP-218ENST00000494044 ANKRD36A6QL64 1941 aa0.03□□□□□ -2.41
LPP-218ENST00000494044 ATP7BP35670 1465 aa0.03□□□□□ -2.41
LPP-218ENST00000494044 PRKDCP78527 4128 aaKnown RBP0.02□□□□□ -2.41
LPP-218ENST00000494044 NSD1Q96L73 2696 aaPredicted RBP0.02□□□□□ -2.41
LPP-218ENST00000494044 HMCN2Q8NDA2 5059 aa0.02□□□□□ -2.41
LPP-218ENST00000494044 EP300Q09472 2414 aaPredicted RBP0.02□□□□□ -2.41
LPP-218ENST00000494044 DEFB112Q30KQ8 113 aa0.02□□□□□ -2.41
LPP-218ENST00000494044 LINC00643Q86TS7 51 aa0.02□□□□□ -2.41
LPP-218ENST00000494044 MRPL34Q9BQ48 92 aaKnown RBP0.02□□□□□ -2.41
LPP-218ENST00000494044 ALMS1Q8TCU4 4167 aa0.02□□□□□ -2.41
LPP-218ENST00000494044 SPTY2D1-AS1A0A0U1RR47 76 aa0.01□□□□□ -2.41
LPP-218ENST00000494044 MYMXA0A1B0GTQ4 84 aa0.01□□□□□ -2.41
LPP-218ENST00000494044 MAGI2Q86UL8 1455 aa0.01□□□□□ -2.41
LPP-218ENST00000494044 UBR1Q8IWV7 1749 aa0.01□□□□□ -2.41
LPP-218ENST00000494044 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.01□□□□□ -2.41
LPP-218ENST00000494044 A0A1B0GUT8 65 aa0□□□□□ -2.41
LPP-218ENST00000494044 FXYD6Q9H0Q3 95 aa0□□□□□ -2.41
LPP-218ENST00000494044 ALKQ9UM73 1620 aa-0.01□□□□□ -2.41
LPP-218ENST00000494044 HSPG2P98160 4391 aa-0.01□□□□□ -2.41
LPP-218ENST00000494044 H1FX-AS1Q4G0G2 97 aa-0.01□□□□□ -2.41
LPP-218ENST00000494044 MAP1BP46821 2468 aaKnown RBP-0.01□□□□□ -2.41
LPP-218ENST00000494044 CLIP1P30622 1438 aa-0.02□□□□□ -2.41
LPP-218ENST00000494044 RGPD4Q7Z3J3 1758 aa-0.02□□□□□ -2.41
LPP-218ENST00000494044 MED14O60244 1454 aa-0.03□□□□□ -2.41
LPP-218ENST00000494044 WNK1Q9H4A3 2382 aa-0.03□□□□□ -2.41
LPP-218ENST00000494044 CCL22O00626 93 aa-0.03□□□□□ -2.41
LPP-218ENST00000494044 ACYP1P07311 99 aa-0.03□□□□□ -2.41
LPP-218ENST00000494044 COX7BP24311 80 aa-0.03□□□□□ -2.41
LPP-218ENST00000494044 LRRC9Q6ZRR7 1453 aa-0.04□□□□□ -2.42
LPP-218ENST00000494044 APC2O95996 2303 aa-0.04□□□□□ -2.42
LPP-218ENST00000494044 UACAQ9BZF9 1416 aa-0.04□□□□□ -2.42
LPP-218ENST00000494044 RB1CC1Q8TDY2 1594 aa-0.05□□□□□ -2.42
LPP-218ENST00000494044 SETXQ7Z333 2677 aaKnown RBP-0.05□□□□□ -2.42
LPP-218ENST00000494044 REV3LO60673 3130 aa-0.05□□□□□ -2.42
LPP-218ENST00000494044 RGPD3A6NKT7 1758 aaPredicted RBP-0.06□□□□□ -2.42
LPP-218ENST00000494044 FLNAP21333 2647 aaKnown RBP-0.06□□□□□ -2.42
LPP-218ENST00000494044 STAB1Q9NY15 2570 aa-0.06□□□□□ -2.42
LPP-218ENST00000494044 DCHS2Q6V1P9 2916 aa-0.07□□□□□ -2.42
LPP-218ENST00000494044 CEBPZOSA8MTT3 80 aa-0.07□□□□□ -2.42
LPP-218ENST00000494044 ACANP16112 2415 aa-0.08□□□□□ -2.42
LPP-218ENST00000494044 PPLO60437 1756 aa-0.08□□□□□ -2.42
LPP-218ENST00000494044 TRAV21A0A0B4J279 112 aa-0.08□□□□□ -2.42
LPP-218ENST00000494044 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
LPP-218ENST00000494044 LELP1Q5T871 98 aa-0.08□□□□□ -2.42
LPP-218ENST00000494044 GAFA1Q96PS6 74 aa-0.08□□□□□ -2.42
LPP-218ENST00000494044 LRRC7Q96NW7 1537 aa-0.08□□□□□ -2.42
LPP-218ENST00000494044 LRP2P98164 4655 aa-0.08□□□□□ -2.42
LPP-218ENST00000494044 ZANQ9Y493 2812 aa-0.09□□□□□ -2.42
LPP-218ENST00000494044 TMEM131LA2VDJ0 1609 aa-0.09□□□□□ -2.42
LPP-218ENST00000494044 KIF14Q15058 1648 aa-0.09□□□□□ -2.42
LPP-218ENST00000494044 RGPD1P0DJD0 1748 aa-0.09□□□□□ -2.42
LPP-218ENST00000494044 PKD1L3Q7Z443 1732 aa-0.09□□□□□ -2.42
LPP-218ENST00000494044 CDKN2A-AS1Q9UH64 79 aa-0.09□□□□□ -2.42
LPP-218ENST00000494044 KIF20BQ96Q89 1820 aa-0.09□□□□□ -2.42
LPP-218ENST00000494044 CNOT1A5YKK6 2376 aaKnown RBP-0.1□□□□□ -2.42
LPP-218ENST00000494044 HECTD4Q9Y4D8 3996 aa-0.1□□□□□ -2.43
LPP-218ENST00000494044 KANTRA0A1W2PQU2 76 aa-0.1□□□□□ -2.43
LPP-218ENST00000494044 LOC730098B7Z3J9 87 aa-0.1□□□□□ -2.43
LPP-218ENST00000494044 RGPD2P0DJD1 1756 aa-0.1□□□□□ -2.43
LPP-218ENST00000494044 USP32Q8NFA0 1604 aa-0.11□□□□□ -2.43
LPP-218ENST00000494044 MAP3K4Q9Y6R4 1608 aa-0.11□□□□□ -2.43
LPP-218ENST00000494044 M0R2T5 61 aa-0.11□□□□□ -2.43
LPP-218ENST00000494044 SRRM2Q9UQ35 2752 aaKnown RBP-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms