RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 S100A7L2Q5SY68 101 aa7.39□□□□□ -1.23
PDLIM1-205ENST00000493949 ATP5EP2Q5VTU8 51 aa7.39□□□□□ -1.23
PDLIM1-205ENST00000493949 Q6JHZ5 121 aa7.39□□□□□ -1.23
PDLIM1-205ENST00000493949 LINC01561Q8N1V8 128 aa7.39□□□□□ -1.23
PDLIM1-205ENST00000493949 DYNLRB2Q8TF09 96 aa7.39□□□□□ -1.23
PDLIM1-205ENST00000493949 CDC42SE2Q9NRR3 84 aa7.39□□□□□ -1.23
PDLIM1-205ENST00000493949 LRP1BQ9NZR2 4599 aa7.38□□□□□ -1.23
PDLIM1-205ENST00000493949 IBA57-AS1B1ANH7 110 aa7.38□□□□□ -1.23
PDLIM1-205ENST00000493949 CRYGAP11844 174 aa7.38□□□□□ -1.23
PDLIM1-205ENST00000493949 COX7CP15954 63 aa7.38□□□□□ -1.23
PDLIM1-205ENST00000493949 RPS28P62857 69 aaKnown RBP7.38□□□□□ -1.23
PDLIM1-205ENST00000493949 Q6ZSN1 163 aa7.38□□□□□ -1.23
PDLIM1-205ENST00000493949 Q8N1X5 172 aa7.38□□□□□ -1.23
PDLIM1-205ENST00000493949 DEFB104AQ8WTQ1 72 aa7.38□□□□□ -1.23
PDLIM1-205ENST00000493949 OBSCN-AS1Q96MR7 158 aa7.38□□□□□ -1.23
PDLIM1-205ENST00000493949 TMEM243Q9BU79 118 aa7.38□□□□□ -1.23
PDLIM1-205ENST00000493949 IGHV3-73A0A0B4J1V6 119 aa7.37□□□□□ -1.23
PDLIM1-205ENST00000493949 UBE2L6O14933 153 aa7.37□□□□□ -1.23
PDLIM1-205ENST00000493949 C9orf153Q5TBE3 101 aa7.37□□□□□ -1.23
PDLIM1-205ENST00000493949 APLNQ9ULZ1 77 aa7.37□□□□□ -1.23
PDLIM1-205ENST00000493949 NPC2P61916 151 aa7.36□□□□□ -1.23
PDLIM1-205ENST00000493949 COX6A2Q02221 97 aa7.36□□□□□ -1.23
PDLIM1-205ENST00000493949 RNASE13Q5GAN3 156 aaKnown RBP7.36□□□□□ -1.23
PDLIM1-205ENST00000493949 CFAP161Q6P656 301 aa7.36□□□□□ -1.23
PDLIM1-205ENST00000493949 SOSTDC1Q6X4U4 206 aa7.36□□□□□ -1.23
PDLIM1-205ENST00000493949 COX7B2Q8TF08 81 aa7.36□□□□□ -1.23
PDLIM1-205ENST00000493949 TRBV6-4A0A1B0GX49 114 aa7.35□□□□□ -1.23
PDLIM1-205ENST00000493949 DEFB114Q30KQ6 69 aa7.35□□□□□ -1.23
PDLIM1-205ENST00000493949 STHQ8IWL8 128 aa7.35□□□□□ -1.23
PDLIM1-205ENST00000493949 SMIM20Q8N5G0 67 aa7.35□□□□□ -1.23
PDLIM1-205ENST00000493949 C16orf74Q96GX8 76 aa7.35□□□□□ -1.23
PDLIM1-205ENST00000493949 CHCHD5Q9BSY4 110 aa7.35□□□□□ -1.23
PDLIM1-205ENST00000493949 H3BQ85 93 aa7.34□□□□□ -1.23
PDLIM1-205ENST00000493949 J3KT08 172 aa7.34□□□□□ -1.23
PDLIM1-205ENST00000493949 DEFB135Q30KP9 77 aa7.34□□□□□ -1.23
PDLIM1-205ENST00000493949 SND1-IT1Q9HBX3 110 aa7.34□□□□□ -1.23
PDLIM1-205ENST00000493949 JMJD7-PLA2G4BH0Y9G9 81 aa7.33□□□□□ -1.24
PDLIM1-205ENST00000493949 BCE1O60756 84 aa7.33□□□□□ -1.24
PDLIM1-205ENST00000493949 HTN1P15515 57 aa7.33□□□□□ -1.24
PDLIM1-205ENST00000493949 RPL18AQ02543 176 aaKnown RBP7.33□□□□□ -1.24
PDLIM1-205ENST00000493949 SMCR5Q8TEV8 140 aa7.33□□□□□ -1.24
PDLIM1-205ENST00000493949 IGHV3-38A0A0C4DH36 116 aa7.32□□□□□ -1.24
PDLIM1-205ENST00000493949 APOC4P55056 127 aa7.32□□□□□ -1.24
PDLIM1-205ENST00000493949 TMEM258P61165 79 aa7.32□□□□□ -1.24
PDLIM1-205ENST00000493949 LINC00167Q96N53 147 aa7.32□□□□□ -1.24
PDLIM1-205ENST00000493949 C22orf24Q9Y442 160 aa7.32□□□□□ -1.24
PDLIM1-205ENST00000493949 A0A087WZ39 114 aa7.31□□□□□ -1.24
PDLIM1-205ENST00000493949 TRGV1A0A0A0MS02 117 aa7.31□□□□□ -1.24
PDLIM1-205ENST00000493949 TRAV13-1A0A0B4J241 112 aa7.31□□□□□ -1.24
PDLIM1-205ENST00000493949 TRBV10-3A0A0K0K1G6 114 aa7.31□□□□□ -1.24
PDLIM1-205ENST00000493949 NANOS2P60321 138 aaKnown RBP7.31□□□□□ -1.24
PDLIM1-205ENST00000493949 GAGE2AQ6NT46 116 aa7.31□□□□□ -1.24
PDLIM1-205ENST00000493949 NTM-AS1Q6ZSK4 140 aa7.31□□□□□ -1.24
PDLIM1-205ENST00000493949 C1orf158Q8N1D5 194 aa7.31□□□□□ -1.24
PDLIM1-205ENST00000493949 KIR2DL5BQ8NHK3 375 aa7.31□□□□□ -1.24
PDLIM1-205ENST00000493949 MYCBP2O75592 4640 aa7.3□□□□□ -1.24
PDLIM1-205ENST00000493949 DNAH5Q8TE73 4624 aa7.3□□□□□ -1.24
PDLIM1-205ENST00000493949 NDUFC2-KCTD14E9PQ53 114 aa7.3□□□□□ -1.24
PDLIM1-205ENST00000493949 NDUFC2O95298 119 aa7.3□□□□□ -1.24
PDLIM1-205ENST00000493949 LINC00694P0DN24 101 aa7.3□□□□□ -1.24
PDLIM1-205ENST00000493949 ODF3L2Q3SX64 289 aa7.3□□□□□ -1.24
PDLIM1-205ENST00000493949 MIR7-3HGQ8N6C7 128 aa7.3□□□□□ -1.24
PDLIM1-205ENST00000493949 SERP2Q8N6R1 65 aa7.3□□□□□ -1.24
PDLIM1-205ENST00000493949 C11orf45Q8TAV5 145 aa7.3□□□□□ -1.24
PDLIM1-205ENST00000493949 C11orf68Q9H3H3 251 aaKnown RBP7.3□□□□□ -1.24
PDLIM1-205ENST00000493949 VPS13BQ7Z7G8 4022 aa7.3□□□□□ -1.24
PDLIM1-205ENST00000493949 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
PDLIM1-205ENST00000493949 COX17Q14061 63 aa7.29□□□□□ -1.24
PDLIM1-205ENST00000493949 LINC00337Q8N6G1 96 aa7.29□□□□□ -1.24
PDLIM1-205ENST00000493949 FAM218AQ96MZ4 157 aa7.29□□□□□ -1.24
PDLIM1-205ENST00000493949 ORMDL1Q9P0S3 153 aa7.29□□□□□ -1.24
PDLIM1-205ENST00000493949 IGKV2-28A0A075B6P5 120 aa7.28□□□□□ -1.24
PDLIM1-205ENST00000493949 IGKV2D-28P01615 120 aa7.28□□□□□ -1.24
PDLIM1-205ENST00000493949 Q8IZM0 81 aa7.28□□□□□ -1.24
PDLIM1-205ENST00000493949 SMIM11BQ8TCY0 68 aa7.28□□□□□ -1.24
PDLIM1-205ENST00000493949 C2orf48Q96LS8 159 aa7.28□□□□□ -1.24
PDLIM1-205ENST00000493949 Q9UF83 564 aa7.28□□□□□ -1.24
PDLIM1-205ENST00000493949 TRBV6-8A0A0A6YYG3 113 aa7.27□□□□□ -1.25
PDLIM1-205ENST00000493949 C16orf90A8MZG2 172 aa7.27□□□□□ -1.25
PDLIM1-205ENST00000493949 DEFB4AO15263 64 aa7.27□□□□□ -1.25
PDLIM1-205ENST00000493949 RPL35AP18077 110 aaKnown RBP7.27□□□□□ -1.25
PDLIM1-205ENST00000493949 CCL18P55774 89 aa7.27□□□□□ -1.25
PDLIM1-205ENST00000493949 LINC00158P58513 81 aa7.27□□□□□ -1.25
PDLIM1-205ENST00000493949 A0A1B0GUV1 79 aa7.26□□□□□ -1.25
PDLIM1-205ENST00000493949 hADV29S1A0JD25 119 aa7.26□□□□□ -1.25
PDLIM1-205ENST00000493949 TMEM256-PLSCR3K7ERE1 68 aa7.26□□□□□ -1.25
PDLIM1-205ENST00000493949 CCKP06307 115 aa7.26□□□□□ -1.25
PDLIM1-205ENST00000493949 Q6ZR54 194 aa7.26□□□□□ -1.25
PDLIM1-205ENST00000493949 OR13C6PQ8NH95 151 aa7.26□□□□□ -1.25
PDLIM1-205ENST00000493949 XCL2Q9UBD3 114 aa7.26□□□□□ -1.25
PDLIM1-205ENST00000493949 M0R2N4 97 aa7.25□□□□□ -1.25
PDLIM1-205ENST00000493949 Q6ZTI0 123 aa7.25□□□□□ -1.25
PDLIM1-205ENST00000493949 PDE6GP18545 87 aa7.24□□□□□ -1.25
PDLIM1-205ENST00000493949 LYPD5Q6UWN5 251 aa7.24□□□□□ -1.25
PDLIM1-205ENST00000493949 FLG2Q5D862 2391 aaPredicted RBP7.24□□□□□ -1.25
PDLIM1-205ENST00000493949 TRGV2A0A075B6R0 118 aa7.23□□□□□ -1.25
PDLIM1-205ENST00000493949 A0A087WYN8 130 aa7.23□□□□□ -1.25
PDLIM1-205ENST00000493949 TRGV4A0A0C4DH28 118 aa7.23□□□□□ -1.25
PDLIM1-205ENST00000493949 A0A0U1RRA0 63 aa7.23□□□□□ -1.25
PDLIM1-205ENST00000493949 LECT2O14960 151 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms